RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 NCOA2Q15596 1464 aa-0.98□□□□□ -2.57
XRN1-205ENST00000465507 RGPD4Q7Z3J3 1758 aa-0.98□□□□□ -2.57
XRN1-205ENST00000465507 GCN1Q92616 2671 aaKnown RBP-0.98□□□□□ -2.57
XRN1-205ENST00000465507 MTORP42345 2549 aa-0.98□□□□□ -2.57
XRN1-205ENST00000465507 H0YAA0 97 aa-0.98□□□□□ -2.57
XRN1-205ENST00000465507 MYO18BQ8IUG5 2567 aa-0.98□□□□□ -2.57
XRN1-205ENST00000465507 TMEM131LA2VDJ0 1609 aa-0.98□□□□□ -2.57
XRN1-205ENST00000465507 DOT1LQ8TEK3 1739 aa-0.98□□□□□ -2.57
XRN1-205ENST00000465507 NEBP20929 6669 aa-0.98□□□□□ -2.57
XRN1-205ENST00000465507 RGPD3A6NKT7 1758 aaPredicted RBP-0.98□□□□□ -2.57
XRN1-205ENST00000465507 WIZO95785 1651 aa-0.99□□□□□ -2.57
XRN1-205ENST00000465507 ZNF831Q5JPB2 1677 aa-0.99□□□□□ -2.57
XRN1-205ENST00000465507 ACYP1P07311 99 aa-0.99□□□□□ -2.57
XRN1-205ENST00000465507 TDRG1Q3Y452 100 aa-0.99□□□□□ -2.57
XRN1-205ENST00000465507 PLXNC1O60486 1568 aa-1□□□□□ -2.57
XRN1-205ENST00000465507 NWD1Q149M9 1564 aa-1□□□□□ -2.57
XRN1-205ENST00000465507 UTP20O75691 2785 aaKnown RBP-1□□□□□ -2.57
XRN1-205ENST00000465507 EPPK1P58107 5090 aaKnown RBP-1□□□□□ -2.57
XRN1-205ENST00000465507 TIAM2Q8IVF5 1701 aa-1□□□□□ -2.57
XRN1-205ENST00000465507 NBEAQ8NFP9 2946 aa-1□□□□□ -2.57
XRN1-205ENST00000465507 LTN1O94822 1766 aa-1.01□□□□□ -2.57
XRN1-205ENST00000465507 ACACAQ13085 2346 aa-1.01□□□□□ -2.57
XRN1-205ENST00000465507 LRRK2Q5S007 2527 aa-1.01□□□□□ -2.57
XRN1-205ENST00000465507 LCE6AA0A183 80 aa-1.01□□□□□ -2.57
XRN1-205ENST00000465507 DNAH1Q9P2D7 4330 aa-1.01□□□□□ -2.57
XRN1-205ENST00000465507 SCN11AQ9UI33 1791 aa-1.01□□□□□ -2.57
XRN1-205ENST00000465507 ABCC3O15438 1527 aa-1.02□□□□□ -2.57
XRN1-205ENST00000465507 IFI6P09912 130 aa-1.02□□□□□ -2.57
XRN1-205ENST00000465507 URB2Q14146 1524 aaKnown RBP-1.02□□□□□ -2.57
XRN1-205ENST00000465507 NESP48681 1621 aa-1.03□□□□□ -2.57
XRN1-205ENST00000465507 UMAD1C9J7I0 102 aa-1.03□□□□□ -2.57
XRN1-205ENST00000465507 PRLHP81277 87 aa-1.03□□□□□ -2.57
XRN1-205ENST00000465507 PKD1L2Q7Z442 2459 aa-1.04□□□□□ -2.58
XRN1-205ENST00000465507 TTC37Q6PGP7 1564 aa-1.04□□□□□ -2.58
XRN1-205ENST00000465507 LYNX1G3V0Z9 82 aa-1.04□□□□□ -2.58
XRN1-205ENST00000465507 IFI27P40305 119 aaPredicted RBP-1.04□□□□□ -2.58
XRN1-205ENST00000465507 DEFA5Q01523 94 aa-1.04□□□□□ -2.58
XRN1-205ENST00000465507 MGAM2Q2M2H8 2515 aa-1.04□□□□□ -2.58
XRN1-205ENST00000465507 FAM186AA6NE01 2351 aa-1.04□□□□□ -2.58
XRN1-205ENST00000465507 DNAH2Q9P225 4427 aa-1.05□□□□□ -2.58
XRN1-205ENST00000465507 DIP2BQ9P265 1576 aa-1.05□□□□□ -2.58
XRN1-205ENST00000465507 WDR87Q6ZQQ6 2873 aa-1.06□□□□□ -2.58
XRN1-205ENST00000465507 ANKRD50Q9ULJ7 1429 aa-1.06□□□□□ -2.58
XRN1-205ENST00000465507 SACSQ9NZJ4 4579 aa-1.06□□□□□ -2.58
XRN1-205ENST00000465507 KIF14Q15058 1648 aa-1.06□□□□□ -2.58
XRN1-205ENST00000465507 KANTRA0A1W2PQU2 76 aa-1.06□□□□□ -2.58
XRN1-205ENST00000465507 DEFB130BP0DP73 79 aa-1.06□□□□□ -2.58
XRN1-205ENST00000465507 DEFB130AP0DP74 79 aa-1.06□□□□□ -2.58
XRN1-205ENST00000465507 MAGI3Q5TCQ9 1506 aa-1.06□□□□□ -2.58
XRN1-205ENST00000465507 CEP290O15078 2479 aa-1.07□□□□□ -2.58
XRN1-205ENST00000465507 DEPDC5O75140 1603 aa-1.07□□□□□ -2.58
XRN1-205ENST00000465507 NDUFA4O00483 81 aa-1.07□□□□□ -2.58
XRN1-205ENST00000465507 MAP3K1Q13233 1512 aa-1.07□□□□□ -2.58
XRN1-205ENST00000465507 CCDC168Q8NDH2 2452 aa-1.08□□□□□ -2.58
XRN1-205ENST00000465507 NBEAL2Q6ZNJ1 2754 aa-1.08□□□□□ -2.58
XRN1-205ENST00000465507 ARFGEF2Q9Y6D5 1785 aa-1.08□□□□□ -2.58
XRN1-205ENST00000465507 NREPQ16612 68 aa-1.09□□□□□ -2.58
XRN1-205ENST00000465507 S4R3F8 94 aa-1.09□□□□□ -2.58
XRN1-205ENST00000465507 CCDC88BA6NC98 1476 aa-1.1□□□□□ -2.59
XRN1-205ENST00000465507 PIK3C2BO00750 1634 aa-1.1□□□□□ -2.59
XRN1-205ENST00000465507 MAP3K4Q9Y6R4 1608 aa-1.1□□□□□ -2.59
XRN1-205ENST00000465507 TRIOO75962 3097 aa-1.1□□□□□ -2.59
XRN1-205ENST00000465507 PPLO60437 1756 aa-1.1□□□□□ -2.59
XRN1-205ENST00000465507 IAPPP10997 89 aa-1.1□□□□□ -2.59
XRN1-205ENST00000465507 DEFB121Q5J5C9 76 aa-1.1□□□□□ -2.59
XRN1-205ENST00000465507 DNAH8Q96JB1 4490 aa-1.11□□□□□ -2.59
XRN1-205ENST00000465507 UACAQ9BZF9 1416 aa-1.11□□□□□ -2.59
XRN1-205ENST00000465507 BIRC6Q9NR09 4857 aa-1.11□□□□□ -2.59
XRN1-205ENST00000465507 ATP5EP2Q5VTU8 51 aa-1.12□□□□□ -2.59
XRN1-205ENST00000465507 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.13□□□□□ -2.59
XRN1-205ENST00000465507 HMGA1P17096 107 aaKnown RBP-1.13□□□□□ -2.59
XRN1-205ENST00000465507 ST20Q9HBF5 79 aa-1.13□□□□□ -2.59
XRN1-205ENST00000465507 RANBP2P49792 3224 aaKnown RBP-1.13□□□□□ -2.59
XRN1-205ENST00000465507 RELNP78509 3460 aa-1.13□□□□□ -2.59
XRN1-205ENST00000465507 ACACBO00763 2458 aa-1.14□□□□□ -2.59
XRN1-205ENST00000465507 SMIM13P0DJ93 91 aa-1.14□□□□□ -2.59
XRN1-205ENST00000465507 A0A0C4DFX4 3053 aa-1.14□□□□□ -2.59
XRN1-205ENST00000465507 RYR1P21817 5038 aa-1.14□□□□□ -2.59
XRN1-205ENST00000465507 HYDINQ4G0P3 5121 aa-1.14□□□□□ -2.59
XRN1-205ENST00000465507 DEFB131BA0A096LNP1 70 aa-1.15□□□□□ -2.59
XRN1-205ENST00000465507 A0A087WXM4 84 aa-1.16□□□□□ -2.6
XRN1-205ENST00000465507 GNG2P59768 71 aa-1.16□□□□□ -2.6
XRN1-205ENST00000465507 ADIRFQ15847 76 aa-1.16□□□□□ -2.6
XRN1-205ENST00000465507 DEFB106AQ8N104 65 aa-1.16□□□□□ -2.6
XRN1-205ENST00000465507 PLECQ15149 4684 aaKnown RBP-1.16□□□□□ -2.6
XRN1-205ENST00000465507 PLCH1Q4KWH8 1693 aa-1.18□□□□□ -2.6
XRN1-205ENST00000465507 H3BUT2 72 aa-1.18□□□□□ -2.6
XRN1-205ENST00000465507 DEFB110Q30KQ9 67 aa-1.18□□□□□ -2.6
XRN1-205ENST00000465507 DDX60LQ5H9U9 1706 aaKnown RBP-1.18□□□□□ -2.6
XRN1-205ENST00000465507 RYR3Q15413 4870 aa-1.19□□□□□ -2.6
XRN1-205ENST00000465507 CRIP1P50238 77 aa-1.19□□□□□ -2.6
XRN1-205ENST00000465507 DOPEY1Q5JWR5 2465 aa-1.2□□□□□ -2.6
XRN1-205ENST00000465507 S100A13Q99584 98 aa-1.2□□□□□ -2.6
XRN1-205ENST00000465507 KCNQ1DNQ9H478 68 aa-1.2□□□□□ -2.6
XRN1-205ENST00000465507 LAMA3Q16787 3333 aa-1.2□□□□□ -2.6
XRN1-205ENST00000465507 MT1HP80294 61 aa-1.21□□□□□ -2.6
XRN1-205ENST00000465507 BVES-AS1Q5T3Y7 98 aa-1.21□□□□□ -2.6
XRN1-205ENST00000465507 MED14O60244 1454 aa-1.21□□□□□ -2.6
XRN1-205ENST00000465507 TEX15Q9BXT5 2789 aa-1.21□□□□□ -2.6
XRN1-205ENST00000465507 CMYA5Q8N3K9 4069 aa-1.21□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms