RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 KRTAP13-2Q52LG2 175 aa8.68□□□□□ -1.02
HLA-F-223ENST00000465459 Q8N377 158 aa8.68□□□□□ -1.02
HLA-F-223ENST00000465459 TYMSOSQ8TAI1 123 aa8.68□□□□□ -1.02
HLA-F-223ENST00000465459 FAT3Q8TDW7 4589 aa8.68□□□□□ -1.02
HLA-F-223ENST00000465459 H3BUT2 72 aa8.67□□□□□ -1.02
HLA-F-223ENST00000465459 NAA38Q9BRA0 125 aaKnown RBP8.67□□□□□ -1.02
HLA-F-223ENST00000465459 TRBV20-1A0A075B6N2 111 aa8.66□□□□□ -1.02
HLA-F-223ENST00000465459 DMBT1Q9UGM3 2413 aaPredicted RBP8.65□□□□□ -1.02
HLA-F-223ENST00000465459 ATXN8Q156A1 80 aa8.65□□□□□ -1.02
HLA-F-223ENST00000465459 SSBP3-AS1Q7Z2R9 100 aa8.65□□□□□ -1.02
HLA-F-223ENST00000465459 SMIM29Q86T20 159 aa8.64□□□□□ -1.03
HLA-F-223ENST00000465459 C3orf22Q8N5N4 141 aa8.64□□□□□ -1.03
HLA-F-223ENST00000465459 IGLV9-49A0A0B4J1Y8 123 aa8.63□□□□□ -1.03
HLA-F-223ENST00000465459 A0A1W2PPM0 123 aa8.63□□□□□ -1.03
HLA-F-223ENST00000465459 ORMDL1Q9P0S3 153 aa8.63□□□□□ -1.03
HLA-F-223ENST00000465459 TCL1BO95988 128 aa8.62□□□□□ -1.03
HLA-F-223ENST00000465459 FABP2P12104 132 aa8.62□□□□□ -1.03
HLA-F-223ENST00000465459 MOBPQ13875 183 aa8.62□□□□□ -1.03
HLA-F-223ENST00000465459 Q8NBF4 154 aa8.62□□□□□ -1.03
HLA-F-223ENST00000465459 F8WEM9 126 aa8.61□□□□□ -1.03
HLA-F-223ENST00000465459 TMEM256-PLSCR3K7ERE1 68 aa8.61□□□□□ -1.03
HLA-F-223ENST00000465459 C9orf153Q5TBE3 101 aa8.6□□□□□ -1.03
HLA-F-223ENST00000465459 SPAG11AQ6PDA7 123 aa8.59□□□□□ -1.03
HLA-F-223ENST00000465459 TNXBP22105 4242 aa8.59□□□□□ -1.03
HLA-F-223ENST00000465459 IGLV8-61A0A075B6I0 122 aa8.58□□□□□ -1.04
HLA-F-223ENST00000465459 LINC00304Q8N9R0 145 aa8.58□□□□□ -1.04
HLA-F-223ENST00000465459 NDUFV3P56181 108 aaKnown RBP8.57□□□□□ -1.04
HLA-F-223ENST00000465459 UBE2V1Q13404 147 aa8.56□□□□□ -1.04
HLA-F-223ENST00000465459 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
HLA-F-223ENST00000465459 Q6JHZ5 121 aa8.56□□□□□ -1.04
HLA-F-223ENST00000465459 BAALC-AS2P0C853 105 aa8.55□□□□□ -1.04
HLA-F-223ENST00000465459 SPCS1Q9Y6A9 102 aa8.54□□□□□ -1.04
HLA-F-223ENST00000465459 SPINK1P00995 79 aa8.53□□□□□ -1.04
HLA-F-223ENST00000465459 CD164Q04900 197 aa8.53□□□□□ -1.04
HLA-F-223ENST00000465459 H3BMG7 143 aa8.52□□□□□ -1.05
HLA-F-223ENST00000465459 C9JAW5 83 aa8.51□□□□□ -1.05
HLA-F-223ENST00000465459 RPS29P62273 56 aaKnown RBP8.51□□□□□ -1.05
HLA-F-223ENST00000465459 ANKRD29Q8N6D5 301 aa8.5□□□□□ -1.05
HLA-F-223ENST00000465459 H3BT86 120 aa8.49□□□□□ -1.05
HLA-F-223ENST00000465459 K7EP34 96 aa8.48□□□□□ -1.05
HLA-F-223ENST00000465459 IGFL1Q6UW32 110 aa8.48□□□□□ -1.05
HLA-F-223ENST00000465459 GTF2H5Q6ZYL4 71 aa8.48□□□□□ -1.05
HLA-F-223ENST00000465459 JMJD7-PLA2G4BH0Y9G9 81 aa8.46□□□□□ -1.06
HLA-F-223ENST00000465459 RBM3P98179 157 aaKnown RBP8.45□□□□□ -1.06
HLA-F-223ENST00000465459 Q6Q795 121 aa8.44□□□□□ -1.06
HLA-F-223ENST00000465459 LIMD2Q9BT23 127 aa8.44□□□□□ -1.06
HLA-F-223ENST00000465459 A0A0G2JQZ4 141 aa8.43□□□□□ -1.06
HLA-F-223ENST00000465459 Q5XG85 94 aa8.43□□□□□ -1.06
HLA-F-223ENST00000465459 TRBV7-4A0A0J9YYF1 115 aa8.42□□□□□ -1.06
HLA-F-223ENST00000465459 HRCT1Q6UXD1 115 aa8.42□□□□□ -1.06
HLA-F-223ENST00000465459 TEN1Q86WV5 123 aa8.42□□□□□ -1.06
HLA-F-223ENST00000465459 DSCR8Q96T75 97 aa8.42□□□□□ -1.06
HLA-F-223ENST00000465459 TRBV7-7A0A0K0K1E9 115 aa8.4□□□□□ -1.06
HLA-F-223ENST00000465459 PDE6GP18545 87 aa8.4□□□□□ -1.06
HLA-F-223ENST00000465459 OBSCN-AS1Q96MR7 158 aa8.4□□□□□ -1.06
HLA-F-223ENST00000465459 A0A1B0GV72 72 aa8.39□□□□□ -1.07
HLA-F-223ENST00000465459 MTURNQ8N3F0 131 aa8.39□□□□□ -1.07
HLA-F-223ENST00000465459 PRO0461Q9UI25 63 aa8.39□□□□□ -1.07
HLA-F-223ENST00000465459 C21orf62-AS1Q17RA5 79 aa8.38□□□□□ -1.07
HLA-F-223ENST00000465459 HERC1Q15751 4861 aa8.38□□□□□ -1.07
HLA-F-223ENST00000465459 LOC110117498A0A087WWA1 95 aa8.37□□□□□ -1.07
HLA-F-223ENST00000465459 A0A1W2PNM2 257 aa8.37□□□□□ -1.07
HLA-F-223ENST00000465459 F8W1H4 67 aa8.37□□□□□ -1.07
HLA-F-223ENST00000465459 SMCPP49901 116 aaPredicted RBP8.37□□□□□ -1.07
HLA-F-223ENST00000465459 CCKP06307 115 aa8.36□□□□□ -1.07
HLA-F-223ENST00000465459 ASB16-AS1Q495Z4 193 aa8.36□□□□□ -1.07
HLA-F-223ENST00000465459 FP248Q71RG6 208 aaPredicted RBP8.35□□□□□ -1.07
HLA-F-223ENST00000465459 SS18L2Q9UHA2 77 aa8.35□□□□□ -1.07
HLA-F-223ENST00000465459 A0A1B0GW54 56 aa8.34□□□□□ -1.07
HLA-F-223ENST00000465459 Q6ZQT0 140 aa8.33□□□□□ -1.08
HLA-F-223ENST00000465459 C14orf132Q9NPU4 83 aa8.33□□□□□ -1.08
HLA-F-223ENST00000465459 RETNLBQ9BQ08 111 aa8.32□□□□□ -1.08
HLA-F-223ENST00000465459 A0A087WSZ3 146 aa8.31□□□□□ -1.08
HLA-F-223ENST00000465459 PRR4Q16378 134 aa8.31□□□□□ -1.08
HLA-F-223ENST00000465459 A0A1B0GV90 55 aa8.3□□□□□ -1.08
HLA-F-223ENST00000465459 VPS25Q9BRG1 176 aa8.3□□□□□ -1.08
HLA-F-223ENST00000465459 C1orf195Q5TG92 126 aa8.29□□□□□ -1.08
HLA-F-223ENST00000465459 IGLV7-46A0A075B6I9 117 aa8.27□□□□□ -1.09
HLA-F-223ENST00000465459 ETDBQ3ZM63 59 aa8.24□□□□□ -1.09
HLA-F-223ENST00000465459 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
HLA-F-223ENST00000465459 HMCN2Q8NDA2 5059 aa8.21□□□□□ -1.1
HLA-F-223ENST00000465459 Q96NJ1 140 aa8.2□□□□□ -1.1
HLA-F-223ENST00000465459 LINC00472Q9H8W2 130 aa8.2□□□□□ -1.1
HLA-F-223ENST00000465459 KRTAP13-3Q3SY46 172 aa8.18□□□□□ -1.1
HLA-F-223ENST00000465459 J3KT08 172 aa8.16□□□□□ -1.1
HLA-F-223ENST00000465459 NREPQ16612 68 aa8.15□□□□□ -1.1
HLA-F-223ENST00000465459 IGKV4-1P06312 121 aa8.14□□□□□ -1.11
HLA-F-223ENST00000465459 SIGMAR1Q99720 223 aa8.12□□□□□ -1.11
HLA-F-223ENST00000465459 CDIP1Q9H305 208 aa8.12□□□□□ -1.11
HLA-F-223ENST00000465459 DEFB116Q30KQ4 102 aa8.1□□□□□ -1.11
HLA-F-223ENST00000465459 ACYP1P07311 99 aa8.09□□□□□ -1.11
HLA-F-223ENST00000465459 UBL5Q9BZL1 73 aa8.09□□□□□ -1.11
HLA-F-223ENST00000465459 Q6ZVQ6 151 aa8.08□□□□□ -1.12
HLA-F-223ENST00000465459 LINC00846Q9NV44 126 aa8.08□□□□□ -1.12
HLA-F-223ENST00000465459 FAM240AA0A1B0GVK7 77 aa8.07□□□□□ -1.12
HLA-F-223ENST00000465459 LRP2P98164 4655 aa8.06□□□□□ -1.12
HLA-F-223ENST00000465459 C9orf92A6NGG3 77 aa8.06□□□□□ -1.12
HLA-F-223ENST00000465459 NDUFB1O75438 58 aa8.06□□□□□ -1.12
HLA-F-223ENST00000465459 LPAP08519 4548 aa8.05□□□□□ -1.12
HLA-F-223ENST00000465459 A8MWP4 228 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms