RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 RPL37AP61513 92 aaKnown RBP8.62□□□□□ -1.03
HDAC6-215ENST00000465457 SPACA4Q8TDM5 124 aa8.62□□□□□ -1.03
HDAC6-215ENST00000465457 LAMTOR3Q9UHA4 124 aa8.61□□□□□ -1.03
HDAC6-215ENST00000465457 UBE2BP63146 152 aa8.6□□□□□ -1.03
HDAC6-215ENST00000465457 SIGMAR1Q99720 223 aa8.6□□□□□ -1.03
HDAC6-215ENST00000465457 CDIP1Q9H305 208 aa8.6□□□□□ -1.03
HDAC6-215ENST00000465457 CHTF8P0CG12 524 aa8.59□□□□□ -1.03
HDAC6-215ENST00000465457 RBM3P98179 157 aaKnown RBP8.59□□□□□ -1.03
HDAC6-215ENST00000465457 LCE2DQ5TA82 110 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-215ENST00000465457 C14orf132Q9NPU4 83 aa8.59□□□□□ -1.03
HDAC6-215ENST00000465457 LOC110117498A0A087WWA1 95 aa8.58□□□□□ -1.04
HDAC6-215ENST00000465457 H0Y9J4 135 aa8.58□□□□□ -1.04
HDAC6-215ENST00000465457 GAGE2AQ6NT46 116 aa8.58□□□□□ -1.04
HDAC6-215ENST00000465457 KRTAP9-2Q9BYQ4 174 aa8.58□□□□□ -1.04
HDAC6-215ENST00000465457 LPAP08519 4548 aa8.57□□□□□ -1.04
HDAC6-215ENST00000465457 DSCR8Q96T75 97 aa8.57□□□□□ -1.04
HDAC6-215ENST00000465457 CCKP06307 115 aa8.56□□□□□ -1.04
HDAC6-215ENST00000465457 NDUFV3P56181 108 aaKnown RBP8.56□□□□□ -1.04
HDAC6-215ENST00000465457 DPH3Q96FX2 82 aa8.56□□□□□ -1.04
HDAC6-215ENST00000465457 Q9BRP9 147 aa8.56□□□□□ -1.04
HDAC6-215ENST00000465457 IGLV5-48A0A075B6I7 105 aa8.55□□□□□ -1.04
HDAC6-215ENST00000465457 PHF5AQ7RTV0 110 aaKnown RBP8.55□□□□□ -1.04
HDAC6-215ENST00000465457 FAM19A1Q7Z5A9 133 aa8.55□□□□□ -1.04
HDAC6-215ENST00000465457 PLAC8Q9NZF1 115 aa8.53□□□□□ -1.04
HDAC6-215ENST00000465457 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-215ENST00000465457 BCE1O60756 84 aa8.52□□□□□ -1.05
HDAC6-215ENST00000465457 SCGB1A1P11684 91 aa8.52□□□□□ -1.05
HDAC6-215ENST00000465457 KRTAP3-3Q9BYR6 98 aa8.52□□□□□ -1.05
HDAC6-215ENST00000465457 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.05
HDAC6-215ENST00000465457 PANO1I0J062 215 aa8.51□□□□□ -1.05
HDAC6-215ENST00000465457 Q6ZQT0 140 aa8.51□□□□□ -1.05
HDAC6-215ENST00000465457 LINC00643Q86TS7 51 aa8.51□□□□□ -1.05
HDAC6-215ENST00000465457 SMCR5Q8TEV8 140 aa8.51□□□□□ -1.05
HDAC6-215ENST00000465457 TRBV7-4A0A0J9YYF1 115 aa8.5□□□□□ -1.05
HDAC6-215ENST00000465457 UBE2AP49459 152 aa8.49□□□□□ -1.05
HDAC6-215ENST00000465457 LINC01547P58512 204 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-215ENST00000465457 Q8N377 158 aa8.49□□□□□ -1.05
HDAC6-215ENST00000465457 A0A1B0GV72 72 aa8.48□□□□□ -1.05
HDAC6-215ENST00000465457 PRLHP81277 87 aa8.48□□□□□ -1.05
HDAC6-215ENST00000465457 DEFB105AQ8NG35 78 aa8.48□□□□□ -1.05
HDAC6-215ENST00000465457 A0A1B0GW54 56 aa8.47□□□□□ -1.05
HDAC6-215ENST00000465457 MUC2Q02817 5179 aa8.47□□□□□ -1.05
HDAC6-215ENST00000465457 KRTAP9-6A0A140TA67 174 aa8.46□□□□□ -1.06
HDAC6-215ENST00000465457 F8WEM9 126 aa8.46□□□□□ -1.06
HDAC6-215ENST00000465457 ERC2-IT1O76042 136 aa8.46□□□□□ -1.06
HDAC6-215ENST00000465457 MT-ATP8P03928 68 aa8.46□□□□□ -1.06
HDAC6-215ENST00000465457 ATP5EP2Q5VTU8 51 aa8.46□□□□□ -1.06
HDAC6-215ENST00000465457 HIGD2AQ9BW72 106 aa8.46□□□□□ -1.06
HDAC6-215ENST00000465457 FAT4Q6V0I7 4981 aa8.45□□□□□ -1.06
HDAC6-215ENST00000465457 Q6Q795 121 aa8.45□□□□□ -1.06
HDAC6-215ENST00000465457 ST20-AS1Q8NBB2 130 aa8.45□□□□□ -1.06
HDAC6-215ENST00000465457 UBL5Q9BZL1 73 aa8.45□□□□□ -1.06
HDAC6-215ENST00000465457 IMUPQ9GZP8 106 aa8.45□□□□□ -1.06
HDAC6-215ENST00000465457 SPRR1BP22528 89 aa8.44□□□□□ -1.06
HDAC6-215ENST00000465457 KRTAP13-1Q8IUC0 172 aa8.44□□□□□ -1.06
HDAC6-215ENST00000465457 KRTAP11-1Q8IUC1 163 aa8.44□□□□□ -1.06
HDAC6-215ENST00000465457 LINC00846Q9NV44 126 aa8.44□□□□□ -1.06
HDAC6-215ENST00000465457 TRBV7-7A0A0K0K1E9 115 aa8.43□□□□□ -1.06
HDAC6-215ENST00000465457 Q6JHZ5 121 aa8.43□□□□□ -1.06
HDAC6-215ENST00000465457 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
HDAC6-215ENST00000465457 ZNF706Q9Y5V0 76 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-215ENST00000465457 IGLV8-61A0A075B6I0 122 aa8.39□□□□□ -1.07
HDAC6-215ENST00000465457 C1orf137Q5JT78 98 aa8.39□□□□□ -1.07
HDAC6-215ENST00000465457 SMIM29Q86T20 159 aa8.38□□□□□ -1.07
HDAC6-215ENST00000465457 PSORS1C2Q9UIG4 136 aa8.38□□□□□ -1.07
HDAC6-215ENST00000465457 C3orf22Q8N5N4 141 aa8.36□□□□□ -1.07
HDAC6-215ENST00000465457 Q8NBF4 154 aa8.36□□□□□ -1.07
HDAC6-215ENST00000465457 ZNF861PO60384 105 aa8.35□□□□□ -1.07
HDAC6-215ENST00000465457 PCP4P48539 62 aa8.35□□□□□ -1.07
HDAC6-215ENST00000465457 Q6ZVQ6 151 aa8.34□□□□□ -1.07
HDAC6-215ENST00000465457 LINC00483Q53H64 154 aa8.33□□□□□ -1.08
HDAC6-215ENST00000465457 SPRR4Q96PI1 79 aa8.33□□□□□ -1.08
HDAC6-215ENST00000465457 IGLV7-43P04211 117 aa8.32□□□□□ -1.08
HDAC6-215ENST00000465457 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
HDAC6-215ENST00000465457 CXCL6P80162 114 aa8.32□□□□□ -1.08
HDAC6-215ENST00000465457 A0A1W2PNM2 257 aa8.3□□□□□ -1.08
HDAC6-215ENST00000465457 CRYGAP11844 174 aa8.3□□□□□ -1.08
HDAC6-215ENST00000465457 NREPQ16612 68 aa8.29□□□□□ -1.08
HDAC6-215ENST00000465457 IGFL1Q6UW32 110 aa8.29□□□□□ -1.08
HDAC6-215ENST00000465457 IGKV3D-7A0A0C4DH55 119 aa8.28□□□□□ -1.08
HDAC6-215ENST00000465457 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-215ENST00000465457 FAM236AA0A1B0GUQ0 79 aa8.23□□□□□ -1.09
HDAC6-215ENST00000465457 FAM236BA0A1B0GV22 79 aa8.23□□□□□ -1.09
HDAC6-215ENST00000465457 HIST1H4AP62805 103 aaKnown RBP8.23□□□□□ -1.09
HDAC6-215ENST00000465457 BPY2O14599 106 aa8.22□□□□□ -1.09
HDAC6-215ENST00000465457 C9orf153Q5TBE3 101 aa8.22□□□□□ -1.09
HDAC6-215ENST00000465457 ANAPC13Q9BS18 74 aa8.22□□□□□ -1.09
HDAC6-215ENST00000465457 ATOX1O00244 68 aa8.2□□□□□ -1.1
HDAC6-215ENST00000465457 IGLV9-49A0A0B4J1Y8 123 aa8.19□□□□□ -1.1
HDAC6-215ENST00000465457 A0A087WSZ3 146 aa8.17□□□□□ -1.1
HDAC6-215ENST00000465457 FAM229BQ4G0N7 80 aa8.17□□□□□ -1.1
HDAC6-215ENST00000465457 SPINK6Q6UWN8 80 aa8.17□□□□□ -1.1
HDAC6-215ENST00000465457 SS18L2Q9UHA2 77 aa8.17□□□□□ -1.1
HDAC6-215ENST00000465457 A0A087WVE0 104 aa8.15□□□□□ -1.1
HDAC6-215ENST00000465457 MOBPQ13875 183 aa8.15□□□□□ -1.1
HDAC6-215ENST00000465457 SSBP3-AS1Q7Z2R9 100 aa8.14□□□□□ -1.11
HDAC6-215ENST00000465457 FSIP2Q5CZC0 6907 aa8.14□□□□□ -1.11
HDAC6-215ENST00000465457 J3KT08 172 aa8.13□□□□□ -1.11
HDAC6-215ENST00000465457 CD164Q04900 197 aa8.13□□□□□ -1.11
HDAC6-215ENST00000465457 SMIM20Q8N5G0 67 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms