RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 IGLV8-61A0A075B6I0 122 aa11.47□□□□□ -0.57
SYNE4-204ENST00000465425 Q5XG85 94 aa11.46□□□□□ -0.57
SYNE4-204ENST00000465425 A0A087WSZ3 146 aa11.46□□□□□ -0.58
SYNE4-204ENST00000465425 PKIGQ9Y2B9 76 aa11.45□□□□□ -0.58
SYNE4-204ENST00000465425 DNAH9Q9NYC9 4486 aa11.45□□□□□ -0.58
SYNE4-204ENST00000465425 C9orf163Q8N9P6 203 aa11.44□□□□□ -0.58
SYNE4-204ENST00000465425 C4orf26Q17RF5 130 aa11.44□□□□□ -0.58
SYNE4-204ENST00000465425 B9D2Q9BPU9 175 aa11.44□□□□□ -0.58
SYNE4-204ENST00000465425 KRTAP11-1Q8IUC1 163 aa11.43□□□□□ -0.58
SYNE4-204ENST00000465425 H0Y9J4 135 aa11.43□□□□□ -0.58
SYNE4-204ENST00000465425 HCG22E2RYF7 251 aa11.42□□□□□ -0.58
SYNE4-204ENST00000465425 DEFB116Q30KQ4 102 aa11.42□□□□□ -0.58
SYNE4-204ENST00000465425 NBDYA0A0U1RRE5 68 aa11.42□□□□□ -0.58
SYNE4-204ENST00000465425 LRCOL1A6NCL2 159 aa11.41□□□□□ -0.58
SYNE4-204ENST00000465425 LINC00474Q9P2X8 69 aa11.41□□□□□ -0.58
SYNE4-204ENST00000465425 TENM2Q9NT68 2774 aa11.4□□□□□ -0.58
SYNE4-204ENST00000465425 DNAH7Q8WXX0 4024 aa11.39□□□□□ -0.59
SYNE4-204ENST00000465425 MDFIQ99750 246 aa11.39□□□□□ -0.59
SYNE4-204ENST00000465425 NUPR2A6NF83 97 aa11.38□□□□□ -0.59
SYNE4-204ENST00000465425 HRCT1Q6UXD1 115 aa11.38□□□□□ -0.59
SYNE4-204ENST00000465425 CSMD3Q7Z407 3707 aa11.38□□□□□ -0.59
SYNE4-204ENST00000465425 LCE6AA0A183 80 aa11.37□□□□□ -0.59
SYNE4-204ENST00000465425 SPRR1BP22528 89 aa11.37□□□□□ -0.59
SYNE4-204ENST00000465425 SMIM26A0A096LP01 95 aa11.37□□□□□ -0.59
SYNE4-204ENST00000465425 SRRM2Q9UQ35 2752 aaKnown RBP11.34□□□□□ -0.59
SYNE4-204ENST00000465425 DYNC2H1Q8NCM8 4307 aaKnown RBP11.33□□□□□ -0.6
SYNE4-204ENST00000465425 Q6ZRN7 208 aaPredicted RBP11.33□□□□□ -0.6
SYNE4-204ENST00000465425 WFDC13Q8IUB5 93 aa11.33□□□□□ -0.6
SYNE4-204ENST00000465425 PANO1I0J062 215 aa11.31□□□□□ -0.6
SYNE4-204ENST00000465425 RPL37AP61513 92 aaKnown RBP11.31□□□□□ -0.6
SYNE4-204ENST00000465425 FP248Q71RG6 208 aaPredicted RBP11.29□□□□□ -0.6
SYNE4-204ENST00000465425 ZCCHC13Q8WW36 166 aaKnown RBP11.27□□□□□ -0.61
SYNE4-204ENST00000465425 KRTAP13-1Q8IUC0 172 aa11.26□□□□□ -0.61
SYNE4-204ENST00000465425 PLECQ15149 4684 aaKnown RBP11.26□□□□□ -0.61
SYNE4-204ENST00000465425 SPACA4Q8TDM5 124 aa11.25□□□□□ -0.61
SYNE4-204ENST00000465425 PRR15Q8IV56 129 aa11.25□□□□□ -0.61
SYNE4-204ENST00000465425 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.25□□□□□ -0.61
SYNE4-204ENST00000465425 A8MWP4 228 aa11.24□□□□□ -0.61
SYNE4-204ENST00000465425 MP68P56378 58 aa11.24□□□□□ -0.61
SYNE4-204ENST00000465425 LINC00472Q9H8W2 130 aa11.24□□□□□ -0.61
SYNE4-204ENST00000465425 CASC2Q6XLA1 102 aa11.23□□□□□ -0.61
SYNE4-204ENST00000465425 KRTAP29-1A8MX34 341 aaPredicted RBP11.21□□□□□ -0.61
SYNE4-204ENST00000465425 FAM229BQ4G0N7 80 aa11.21□□□□□ -0.61
SYNE4-204ENST00000465425 A0A087WTM6 91 aa11.2□□□□□ -0.62
SYNE4-204ENST00000465425 IGLV9-49A0A0B4J1Y8 123 aa11.2□□□□□ -0.62
SYNE4-204ENST00000465425 NDUFB1O75438 58 aa11.19□□□□□ -0.62
SYNE4-204ENST00000465425 MPLKIPQ8TAP9 179 aa11.17□□□□□ -0.62
SYNE4-204ENST00000465425 LINC00208Q96KT6 92 aa11.15□□□□□ -0.62
SYNE4-204ENST00000465425 RTL8CO15255 209 aa11.14□□□□□ -0.63
SYNE4-204ENST00000465425 hDV103S1A0JD37 113 aa11.14□□□□□ -0.63
SYNE4-204ENST00000465425 C1orf64Q8NEQ6 169 aa11.13□□□□□ -0.63
SYNE4-204ENST00000465425 ZNF706Q9Y5V0 76 aaPredicted RBP11.13□□□□□ -0.63
SYNE4-204ENST00000465425 H0Y9P7 68 aa11.13□□□□□ -0.63
SYNE4-204ENST00000465425 TRAV22A0A0B4J277 110 aa11.12□□□□□ -0.63
SYNE4-204ENST00000465425 STARD9Q9P2P6 4700 aa11.12□□□□□ -0.63
SYNE4-204ENST00000465425 LINC00483Q53H64 154 aa11.12□□□□□ -0.63
SYNE4-204ENST00000465425 PRR4Q16378 134 aa11.11□□□□□ -0.63
SYNE4-204ENST00000465425 LINC00336Q6ZUF6 198 aa11.1□□□□□ -0.63
SYNE4-204ENST00000465425 PSORS1C2Q9UIG4 136 aa11.1□□□□□ -0.63
SYNE4-204ENST00000465425 H3BPC8 53 aa11.1□□□□□ -0.63
SYNE4-204ENST00000465425 IGLV5-52A0A0A0MRZ9 124 aa11.09□□□□□ -0.63
SYNE4-204ENST00000465425 CYP4F30PQ9H0H9 118 aa11.09□□□□□ -0.63
SYNE4-204ENST00000465425 MMP24-AS1A0A0U1RRL7 71 aa11.08□□□□□ -0.64
SYNE4-204ENST00000465425 HECTD4Q9Y4D8 3996 aa11.07□□□□□ -0.64
SYNE4-204ENST00000465425 VPS13DQ5THJ4 4388 aa11.07□□□□□ -0.64
SYNE4-204ENST00000465425 Q6ZR54 194 aa11.06□□□□□ -0.64
SYNE4-204ENST00000465425 Q96NJ1 140 aa11.06□□□□□ -0.64
SYNE4-204ENST00000465425 PLAC8Q9NZF1 115 aa11.06□□□□□ -0.64
SYNE4-204ENST00000465425 MOBPQ13875 183 aa11.05□□□□□ -0.64
SYNE4-204ENST00000465425 WWC2-AS2Q96NR7 200 aa11.05□□□□□ -0.64
SYNE4-204ENST00000465425 ZNF861PO60384 105 aa11.04□□□□□ -0.64
SYNE4-204ENST00000465425 PRKDCP78527 4128 aaKnown RBP11.03□□□□□ -0.64
SYNE4-204ENST00000465425 PRO0628Q9UI54 55 aa11.02□□□□□ -0.64
SYNE4-204ENST00000465425 KMT2AQ03164 3969 aa11.01□□□□□ -0.65
SYNE4-204ENST00000465425 ANAPC11Q9NYG5 84 aa11.01□□□□□ -0.65
SYNE4-204ENST00000465425 SPANXA2-OT1Q8N9U9 137 aa11□□□□□ -0.65
SYNE4-204ENST00000465425 C1orf134Q5TEV5 83 aa11□□□□□ -0.65
SYNE4-204ENST00000465425 CDK2AP2O75956 126 aa10.99□□□□□ -0.65
SYNE4-204ENST00000465425 FRAS1Q86XX4 4008 aa10.99□□□□□ -0.65
SYNE4-204ENST00000465425 C8orf17Q9NRJ1 99 aa10.98□□□□□ -0.65
SYNE4-204ENST00000465425 TP53AIP1Q9HCN2 124 aa10.97□□□□□ -0.65
SYNE4-204ENST00000465425 IGHV6-1A0A0B4J1U7 121 aa10.97□□□□□ -0.65
SYNE4-204ENST00000465425 BRK1Q8WUW1 75 aa10.97□□□□□ -0.65
SYNE4-204ENST00000465425 A0A1B0GVX0 72 aa10.96□□□□□ -0.66
SYNE4-204ENST00000465425 Q1T7F1 81 aa10.96□□□□□ -0.66
SYNE4-204ENST00000465425 ASB16-AS1Q495Z4 193 aa10.95□□□□□ -0.66
SYNE4-204ENST00000465425 MEGF8Q7Z7M0 2845 aa10.95□□□□□ -0.66
SYNE4-204ENST00000465425 DNAH2Q9P225 4427 aa10.93□□□□□ -0.66
SYNE4-204ENST00000465425 NDUFS5O43920 106 aa10.93□□□□□ -0.66
SYNE4-204ENST00000465425 LY6G6CO95867 125 aa10.91□□□□□ -0.66
SYNE4-204ENST00000465425 TGP01266 2768 aa10.91□□□□□ -0.66
SYNE4-204ENST00000465425 IGLV7-43P04211 117 aa10.91□□□□□ -0.66
SYNE4-204ENST00000465425 FBN3Q75N90 2809 aa10.89□□□□□ -0.67
SYNE4-204ENST00000465425 MRPL34Q9BQ48 92 aaKnown RBP10.87□□□□□ -0.67
SYNE4-204ENST00000465425 DNAH17Q9UFH2 4485 aa10.86□□□□□ -0.67
SYNE4-204ENST00000465425 DNAH8Q96JB1 4490 aa10.86□□□□□ -0.67
SYNE4-204ENST00000465425 PCOTHQ58A44 107 aa10.85□□□□□ -0.67
SYNE4-204ENST00000465425 V9GYY9 64 aa10.85□□□□□ -0.67
SYNE4-204ENST00000465425 PSPHP1O15172 72 aa10.85□□□□□ -0.67
SYNE4-204ENST00000465425 SPINK6Q6UWN8 80 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms