RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 IGFL1Q6UW32 110 aa8.84□□□□□ -0.99
HMGN1-209ENST00000463631 HIST1H2BKO60814 126 aa8.83□□□□□ -1
HMGN1-209ENST00000463631 HIST1H2BJP06899 126 aa8.83□□□□□ -1
HMGN1-209ENST00000463631 HIST1H2BOP23527 126 aa8.83□□□□□ -1
HMGN1-209ENST00000463631 HIST1H2BBP33778 126 aa8.83□□□□□ -1
HMGN1-209ENST00000463631 HIST1H2BDP58876 126 aa8.83□□□□□ -1
HMGN1-209ENST00000463631 HIST1H2BCP62807 126 aa8.83□□□□□ -1
HMGN1-209ENST00000463631 HIST2H2BEQ16778 126 aa8.83□□□□□ -1
HMGN1-209ENST00000463631 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.83□□□□□ -1
HMGN1-209ENST00000463631 MUSTN1Q8IVN3 82 aa8.83□□□□□ -1
HMGN1-209ENST00000463631 HIST1H2BHQ93079 126 aa8.83□□□□□ -1
HMGN1-209ENST00000463631 HIST1H2BNQ99877 126 aa8.83□□□□□ -1
HMGN1-209ENST00000463631 HIST1H2BMQ99879 126 aa8.83□□□□□ -1
HMGN1-209ENST00000463631 C3orf79P0CE67 100 aa8.82□□□□□ -1
HMGN1-209ENST00000463631 FCGBPQ9Y6R7 5405 aaPredicted RBP8.81□□□□□ -1
HMGN1-209ENST00000463631 LINC00575Q6W349 94 aa8.81□□□□□ -1
HMGN1-209ENST00000463631 Q6ZQY7 126 aa8.81□□□□□ -1
HMGN1-209ENST00000463631 VAMP3Q15836 100 aa8.8□□□□□ -1
HMGN1-209ENST00000463631 ANKRD39Q53RE8 183 aa8.8□□□□□ -1
HMGN1-209ENST00000463631 C20orf166-AS1Q96NR2 134 aa8.8□□□□□ -1
HMGN1-209ENST00000463631 OCIAD2Q56VL3 154 aa8.79□□□□□ -1
HMGN1-209ENST00000463631 A6NJY4 79 aa8.78□□□□□ -1
HMGN1-209ENST00000463631 Q96NJ1 140 aa8.78□□□□□ -1
HMGN1-209ENST00000463631 SLC7A5P1Q8MH63 180 aa8.77□□□□□ -1.01
HMGN1-209ENST00000463631 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
HMGN1-209ENST00000463631 hADV29S1A0JD25 119 aa8.76□□□□□ -1.01
HMGN1-209ENST00000463631 A8MUU9 505 aa8.76□□□□□ -1.01
HMGN1-209ENST00000463631 LST1O00453 97 aa8.76□□□□□ -1.01
HMGN1-209ENST00000463631 MT2AP02795 61 aa8.76□□□□□ -1.01
HMGN1-209ENST00000463631 PPDPFLQ8WWR9 84 aa8.75□□□□□ -1.01
HMGN1-209ENST00000463631 KRTDAPP60985 99 aa8.74□□□□□ -1.01
HMGN1-209ENST00000463631 SCGB1D1O95968 90 aa8.72□□□□□ -1.01
HMGN1-209ENST00000463631 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.72□□□□□ -1.01
HMGN1-209ENST00000463631 KRTAP19-1Q8IUB9 90 aa8.72□□□□□ -1.01
HMGN1-209ENST00000463631 SS18L2Q9UHA2 77 aa8.72□□□□□ -1.01
HMGN1-209ENST00000463631 COA6Q5JTJ3 125 aaKnown RBP8.71□□□□□ -1.02
HMGN1-209ENST00000463631 MT1FP04733 61 aa8.69□□□□□ -1.02
HMGN1-209ENST00000463631 ATOH7Q8N100 152 aa8.69□□□□□ -1.02
HMGN1-209ENST00000463631 H3BUT2 72 aa8.68□□□□□ -1.02
HMGN1-209ENST00000463631 KRTAP9-3Q9BYQ3 159 aa8.67□□□□□ -1.02
HMGN1-209ENST00000463631 SNHG12Q9BXW3 62 aa8.66□□□□□ -1.02
HMGN1-209ENST00000463631 SNRPEP62304 92 aaKnown RBP8.65□□□□□ -1.02
HMGN1-209ENST00000463631 BVES-AS1Q5T3Y7 98 aa8.64□□□□□ -1.03
HMGN1-209ENST00000463631 TEN1Q86WV5 123 aa8.62□□□□□ -1.03
HMGN1-209ENST00000463631 MPLKIPQ8TAP9 179 aa8.62□□□□□ -1.03
HMGN1-209ENST00000463631 FAM236DA0A1B0GTK5 79 aa8.61□□□□□ -1.03
HMGN1-209ENST00000463631 FAM236CP0DP71 79 aa8.61□□□□□ -1.03
HMGN1-209ENST00000463631 MACF1Q9UPN3 7388 aaKnown RBP8.6□□□□□ -1.03
HMGN1-209ENST00000463631 KRTAP16-1A8MUX0 517 aa8.6□□□□□ -1.03
HMGN1-209ENST00000463631 KRTAP10-10P60014 251 aa8.6□□□□□ -1.03
HMGN1-209ENST00000463631 A0A087WSZ3 146 aa8.58□□□□□ -1.04
HMGN1-209ENST00000463631 DSCR10P59022 87 aa8.58□□□□□ -1.04
HMGN1-209ENST00000463631 HRES1P13985 223 aa8.56□□□□□ -1.04
HMGN1-209ENST00000463631 RBM12B-AS1Q9P1G2 102 aa8.56□□□□□ -1.04
HMGN1-209ENST00000463631 C12orf57Q99622 126 aa8.55□□□□□ -1.04
HMGN1-209ENST00000463631 SYNE2Q8WXH0 6885 aaKnown RBP8.54□□□□□ -1.04
HMGN1-209ENST00000463631 NDUFV3P56181 108 aaKnown RBP8.54□□□□□ -1.04
HMGN1-209ENST00000463631 SIGMAR1Q99720 223 aa8.53□□□□□ -1.04
HMGN1-209ENST00000463631 LINC00313P59037 77 aa8.51□□□□□ -1.05
HMGN1-209ENST00000463631 LINC00846Q9NV44 126 aa8.51□□□□□ -1.05
HMGN1-209ENST00000463631 KRTAP19-6Q3LI70 58 aa8.5□□□□□ -1.05
HMGN1-209ENST00000463631 HSBP1L1C9JCN9 74 aa8.49□□□□□ -1.05
HMGN1-209ENST00000463631 SNCGO76070 127 aa8.49□□□□□ -1.05
HMGN1-209ENST00000463631 H3BMG7 143 aa8.48□□□□□ -1.05
HMGN1-209ENST00000463631 NOTCH2NLQ7Z3S9 236 aa8.48□□□□□ -1.05
HMGN1-209ENST00000463631 HIST1H4GQ99525 98 aa8.47□□□□□ -1.05
HMGN1-209ENST00000463631 A0A1W2PNM2 257 aa8.46□□□□□ -1.06
HMGN1-209ENST00000463631 H0YGX0 51 aa8.46□□□□□ -1.06
HMGN1-209ENST00000463631 FAM218AQ96MZ4 157 aa8.46□□□□□ -1.06
HMGN1-209ENST00000463631 GHRHP01286 108 aa8.44□□□□□ -1.06
HMGN1-209ENST00000463631 IGKV4-1P06312 121 aa8.43□□□□□ -1.06
HMGN1-209ENST00000463631 HIST1H2BLQ99880 126 aa8.42□□□□□ -1.06
HMGN1-209ENST00000463631 A0A1B0GX51 115 aa8.41□□□□□ -1.06
HMGN1-209ENST00000463631 MTURNQ8N3F0 131 aa8.41□□□□□ -1.06
HMGN1-209ENST00000463631 TRBV7-4A0A0J9YYF1 115 aa8.4□□□□□ -1.06
HMGN1-209ENST00000463631 HIST3H2BBQ8N257 126 aa8.4□□□□□ -1.06
HMGN1-209ENST00000463631 FABP2P12104 132 aa8.39□□□□□ -1.07
HMGN1-209ENST00000463631 RAB37Q96AX2 223 aa8.39□□□□□ -1.07
HMGN1-209ENST00000463631 A0A0B4J2C4 111 aa8.38□□□□□ -1.07
HMGN1-209ENST00000463631 COX8AP10176 69 aa8.37□□□□□ -1.07
HMGN1-209ENST00000463631 LINC00472Q9H8W2 130 aa8.37□□□□□ -1.07
HMGN1-209ENST00000463631 DLEU1O43261 78 aa8.36□□□□□ -1.07
HMGN1-209ENST00000463631 S100A2P29034 98 aa8.36□□□□□ -1.07
HMGN1-209ENST00000463631 IGHV6-1A0A0B4J1U7 121 aa8.34□□□□□ -1.07
HMGN1-209ENST00000463631 KRTAP6-3Q3LI67 103 aa8.34□□□□□ -1.07
HMGN1-209ENST00000463631 ANKRD29Q8N6D5 301 aa8.33□□□□□ -1.08
HMGN1-209ENST00000463631 A8MWP4 228 aa8.32□□□□□ -1.08
HMGN1-209ENST00000463631 DEFB116Q30KQ4 102 aa8.32□□□□□ -1.08
HMGN1-209ENST00000463631 HIGD1BQ9P298 99 aa8.31□□□□□ -1.08
HMGN1-209ENST00000463631 C8orf87E5RJ46 101 aa8.3□□□□□ -1.08
HMGN1-209ENST00000463631 ZCCHC13Q8WW36 166 aaKnown RBP8.3□□□□□ -1.08
HMGN1-209ENST00000463631 SPINK7P58062 85 aa8.29□□□□□ -1.08
HMGN1-209ENST00000463631 A0A1B0GVX0 72 aa8.27□□□□□ -1.09
HMGN1-209ENST00000463631 H3BQ85 93 aa8.27□□□□□ -1.09
HMGN1-209ENST00000463631 TRACP01848 142 aa8.27□□□□□ -1.09
HMGN1-209ENST00000463631 CCKP06307 115 aa8.27□□□□□ -1.09
HMGN1-209ENST00000463631 PRO1854Q9UHT4 67 aa8.27□□□□□ -1.09
HMGN1-209ENST00000463631 ORMDL1Q9P0S3 153 aa8.26□□□□□ -1.09
HMGN1-209ENST00000463631 TRIAP1O43715 76 aa8.25□□□□□ -1.09
HMGN1-209ENST00000463631 A0A1B0GV72 72 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms