RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 ZNF706Q9Y5V0 76 aaPredicted RBP11.56□□□□□ -0.56
CCDC78-206ENST00000463539 FAM240AA0A1B0GVK7 77 aa11.54□□□□□ -0.56
CCDC78-206ENST00000463539 F8WEM9 126 aa11.54□□□□□ -0.56
CCDC78-206ENST00000463539 SPRR4Q96PI1 79 aa11.54□□□□□ -0.56
CCDC78-206ENST00000463539 TRBV7-4A0A0J9YYF1 115 aa11.53□□□□□ -0.56
CCDC78-206ENST00000463539 CCKP06307 115 aa11.53□□□□□ -0.56
CCDC78-206ENST00000463539 PDE6GP18545 87 aa11.53□□□□□ -0.56
CCDC78-206ENST00000463539 Q6ZQT0 140 aa11.53□□□□□ -0.56
CCDC78-206ENST00000463539 ACYP1P07311 99 aa11.51□□□□□ -0.57
CCDC78-206ENST00000463539 APOBP04114 4563 aaKnown RBP11.5□□□□□ -0.57
CCDC78-206ENST00000463539 LINC00483Q53H64 154 aa11.49□□□□□ -0.57
CCDC78-206ENST00000463539 VPS25Q9BRG1 176 aa11.49□□□□□ -0.57
CCDC78-206ENST00000463539 RPL37AP61513 92 aaKnown RBP11.47□□□□□ -0.57
CCDC78-206ENST00000463539 SMR3BP02814 79 aaPredicted RBP11.46□□□□□ -0.57
CCDC78-206ENST00000463539 CDIP1Q9H305 208 aa11.46□□□□□ -0.58
CCDC78-206ENST00000463539 VPS13BQ7Z7G8 4022 aa11.44□□□□□ -0.58
CCDC78-206ENST00000463539 IGLV8-61A0A075B6I0 122 aa11.44□□□□□ -0.58
CCDC78-206ENST00000463539 SVIPQ8NHG7 77 aa11.42□□□□□ -0.58
CCDC78-206ENST00000463539 LINC00846Q9NV44 126 aa11.41□□□□□ -0.58
CCDC78-206ENST00000463539 ANAPC11Q9NYG5 84 aa11.41□□□□□ -0.58
CCDC78-206ENST00000463539 IGLV9-49A0A0B4J1Y8 123 aa11.4□□□□□ -0.58
CCDC78-206ENST00000463539 IGFL1Q6UW32 110 aa11.4□□□□□ -0.58
CCDC78-206ENST00000463539 Q6JHZ5 121 aa11.39□□□□□ -0.59
CCDC78-206ENST00000463539 C9orf153Q5TBE3 101 aa11.39□□□□□ -0.59
CCDC78-206ENST00000463539 Q8NBF4 154 aa11.38□□□□□ -0.59
CCDC78-206ENST00000463539 A0A1W2PNM2 257 aa11.37□□□□□ -0.59
CCDC78-206ENST00000463539 A0A0G2JQZ4 141 aa11.37□□□□□ -0.59
CCDC78-206ENST00000463539 CDK2AP2O75956 126 aa11.36□□□□□ -0.59
CCDC78-206ENST00000463539 FAT1Q14517 4588 aa11.34□□□□□ -0.59
CCDC78-206ENST00000463539 SPINK6Q6UWN8 80 aa11.34□□□□□ -0.59
CCDC78-206ENST00000463539 MOBPQ13875 183 aa11.33□□□□□ -0.6
CCDC78-206ENST00000463539 UBL5Q9BZL1 73 aa11.33□□□□□ -0.6
CCDC78-206ENST00000463539 A0A1B0GW54 56 aa11.32□□□□□ -0.6
CCDC78-206ENST00000463539 CRYGAP11844 174 aa11.31□□□□□ -0.6
CCDC78-206ENST00000463539 KRTAP10-4P60372 401 aaPredicted RBP11.31□□□□□ -0.6
CCDC78-206ENST00000463539 LINC00643Q86TS7 51 aa11.31□□□□□ -0.6
CCDC78-206ENST00000463539 FAM229BQ4G0N7 80 aa11.3□□□□□ -0.6
CCDC78-206ENST00000463539 SIGMAR1Q99720 223 aa11.29□□□□□ -0.6
CCDC78-206ENST00000463539 MT-ATP8P03928 68 aa11.28□□□□□ -0.6
CCDC78-206ENST00000463539 KRTAP1-4P0C5Y4 121 aa11.28□□□□□ -0.6
CCDC78-206ENST00000463539 FAM229AH3BQW9 127 aa11.28□□□□□ -0.6
CCDC78-206ENST00000463539 PLA2G1BP04054 148 aaKnown RBP11.27□□□□□ -0.61
CCDC78-206ENST00000463539 Q6ZVQ6 151 aa11.27□□□□□ -0.61
CCDC78-206ENST00000463539 EPPK1P58107 5090 aaKnown RBP11.26□□□□□ -0.61
CCDC78-206ENST00000463539 A0A087X002 238 aa11.26□□□□□ -0.61
CCDC78-206ENST00000463539 Q6Q795 121 aa11.26□□□□□ -0.61
CCDC78-206ENST00000463539 SCGB1A1P11684 91 aa11.25□□□□□ -0.61
CCDC78-206ENST00000463539 HSPG2P98160 4391 aa11.25□□□□□ -0.61
CCDC78-206ENST00000463539 A0A087WSZ3 146 aa11.23□□□□□ -0.61
CCDC78-206ENST00000463539 NREPQ16612 68 aa11.23□□□□□ -0.61
CCDC78-206ENST00000463539 RYR1P21817 5038 aa11.22□□□□□ -0.61
CCDC78-206ENST00000463539 SSBP3-AS1Q7Z2R9 100 aa11.22□□□□□ -0.61
CCDC78-206ENST00000463539 KRTAP13-2Q52LG2 175 aa11.21□□□□□ -0.61
CCDC78-206ENST00000463539 TRBV7-7A0A0K0K1E9 115 aa11.21□□□□□ -0.62
CCDC78-206ENST00000463539 Q5VSD8 79 aa11.21□□□□□ -0.62
CCDC78-206ENST00000463539 ATP5EP2Q5VTU8 51 aa11.21□□□□□ -0.62
CCDC78-206ENST00000463539 IGKV3D-7A0A0C4DH55 119 aa11.19□□□□□ -0.62
CCDC78-206ENST00000463539 HRCT1Q6UXD1 115 aa11.19□□□□□ -0.62
CCDC78-206ENST00000463539 KIAA1109Q2LD37 5005 aa11.16□□□□□ -0.62
CCDC78-206ENST00000463539 CXCL6P80162 114 aa11.14□□□□□ -0.63
CCDC78-206ENST00000463539 CD164Q04900 197 aa11.13□□□□□ -0.63
CCDC78-206ENST00000463539 TYMSOSQ8TAI1 123 aa11.13□□□□□ -0.63
CCDC78-206ENST00000463539 BPY2O14599 106 aa11.12□□□□□ -0.63
CCDC78-206ENST00000463539 PRR26Q8N8Z3 221 aa11.12□□□□□ -0.63
CCDC78-206ENST00000463539 IMUPQ9GZP8 106 aa11.12□□□□□ -0.63
CCDC78-206ENST00000463539 SS18L2Q9UHA2 77 aa11.12□□□□□ -0.63
CCDC78-206ENST00000463539 Q8N1X5 172 aa11.09□□□□□ -0.63
CCDC78-206ENST00000463539 HIST1H4AP62805 103 aaKnown RBP11.07□□□□□ -0.64
CCDC78-206ENST00000463539 KRTAP17-1Q9BYP8 105 aa11.07□□□□□ -0.64
CCDC78-206ENST00000463539 PKHD1L1Q86WI1 4243 aa11.05□□□□□ -0.64
CCDC78-206ENST00000463539 DEFB116Q30KQ4 102 aa11.05□□□□□ -0.64
CCDC78-206ENST00000463539 LINC00472Q9H8W2 130 aa11.05□□□□□ -0.64
CCDC78-206ENST00000463539 C4orf48Q5BLP8 95 aa11.02□□□□□ -0.64
CCDC78-206ENST00000463539 A0A087WVE0 104 aa11.02□□□□□ -0.65
CCDC78-206ENST00000463539 Q8N9L7 120 aa11.02□□□□□ -0.65
CCDC78-206ENST00000463539 DSCR10P59022 87 aa11□□□□□ -0.65
CCDC78-206ENST00000463539 LINC00304Q8N9R0 145 aa11□□□□□ -0.65
CCDC78-206ENST00000463539 Q96NJ1 140 aa11□□□□□ -0.65
CCDC78-206ENST00000463539 J3KT08 172 aa10.98□□□□□ -0.65
CCDC78-206ENST00000463539 SPINK1P00995 79 aa10.98□□□□□ -0.65
CCDC78-206ENST00000463539 LIMD2Q9BT23 127 aa10.98□□□□□ -0.65
CCDC78-206ENST00000463539 IGKV4-1P06312 121 aa10.97□□□□□ -0.65
CCDC78-206ENST00000463539 Q5XG85 94 aa10.97□□□□□ -0.65
CCDC78-206ENST00000463539 BIRC6Q9NR09 4857 aa10.96□□□□□ -0.66
CCDC78-206ENST00000463539 FAM236AA0A1B0GUQ0 79 aa10.95□□□□□ -0.66
CCDC78-206ENST00000463539 FAM236BA0A1B0GV22 79 aa10.95□□□□□ -0.66
CCDC78-206ENST00000463539 K7EQZ3 153 aa10.95□□□□□ -0.66
CCDC78-206ENST00000463539 ASB16-AS1Q495Z4 193 aa10.95□□□□□ -0.66
CCDC78-206ENST00000463539 SPAG11AQ6PDA7 123 aa10.95□□□□□ -0.66
CCDC78-206ENST00000463539 A8MWP4 228 aa10.93□□□□□ -0.66
CCDC78-206ENST00000463539 RPS29P62273 56 aaKnown RBP10.91□□□□□ -0.66
CCDC78-206ENST00000463539 LRP1Q07954 4544 aaKnown RBP10.89□□□□□ -0.67
CCDC78-206ENST00000463539 NDUFB1O75438 58 aa10.88□□□□□ -0.67
CCDC78-206ENST00000463539 PRR15Q8IV56 129 aa10.88□□□□□ -0.67
CCDC78-206ENST00000463539 KRTAP10-8P60410 259 aa10.86□□□□□ -0.67
CCDC78-206ENST00000463539 C1orf195Q5TG92 126 aa10.86□□□□□ -0.67
CCDC78-206ENST00000463539 FLG2Q5D862 2391 aaPredicted RBP10.85□□□□□ -0.67
CCDC78-206ENST00000463539 FAT3Q8TDW7 4589 aa10.82□□□□□ -0.68
CCDC78-206ENST00000463539 A0A1B0GVX0 72 aa10.81□□□□□ -0.68
CCDC78-206ENST00000463539 HCG22E2RYF7 251 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms