RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 HIST1H2BJP06899 126 aa10.61□□□□□ -0.71
CPSF7-209ENST00000463244 HIST1H2BOP23527 126 aa10.61□□□□□ -0.71
CPSF7-209ENST00000463244 HIST1H2BBP33778 126 aa10.61□□□□□ -0.71
CPSF7-209ENST00000463244 HIST1H2BDP58876 126 aa10.61□□□□□ -0.71
CPSF7-209ENST00000463244 HIST1H2BCP62807 126 aa10.61□□□□□ -0.71
CPSF7-209ENST00000463244 HIST2H2BEQ16778 126 aa10.61□□□□□ -0.71
CPSF7-209ENST00000463244 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.61□□□□□ -0.71
CPSF7-209ENST00000463244 HIST1H2BHQ93079 126 aa10.61□□□□□ -0.71
CPSF7-209ENST00000463244 HIST1H2BNQ99877 126 aa10.61□□□□□ -0.71
CPSF7-209ENST00000463244 HIST1H2BMQ99879 126 aa10.61□□□□□ -0.71
CPSF7-209ENST00000463244 C3orf79P0CE67 100 aa10.6□□□□□ -0.71
CPSF7-209ENST00000463244 ANKRD39Q53RE8 183 aa10.58□□□□□ -0.72
CPSF7-209ENST00000463244 LINC00575Q6W349 94 aa10.58□□□□□ -0.72
CPSF7-209ENST00000463244 Q6ZQY7 126 aa10.58□□□□□ -0.72
CPSF7-209ENST00000463244 SLC7A5P1Q8MH63 180 aa10.57□□□□□ -0.72
CPSF7-209ENST00000463244 Q96NJ1 140 aa10.57□□□□□ -0.72
CPSF7-209ENST00000463244 VAMP3Q15836 100 aa10.56□□□□□ -0.72
CPSF7-209ENST00000463244 OCIAD2Q56VL3 154 aa10.56□□□□□ -0.72
CPSF7-209ENST00000463244 C20orf166-AS1Q96NR2 134 aa10.54□□□□□ -0.72
CPSF7-209ENST00000463244 hADV29S1A0JD25 119 aa10.53□□□□□ -0.72
CPSF7-209ENST00000463244 LST1O00453 97 aa10.53□□□□□ -0.72
CPSF7-209ENST00000463244 KRTDAPP60985 99 aa10.52□□□□□ -0.73
CPSF7-209ENST00000463244 TRBV20-1A0A075B6N2 111 aa10.51□□□□□ -0.73
CPSF7-209ENST00000463244 A8MUU9 505 aa10.5□□□□□ -0.73
CPSF7-209ENST00000463244 MT2AP02795 61 aa10.5□□□□□ -0.73
CPSF7-209ENST00000463244 ATOH7Q8N100 152 aa10.48□□□□□ -0.73
CPSF7-209ENST00000463244 KRTAP19-1Q8IUB9 90 aa10.47□□□□□ -0.73
CPSF7-209ENST00000463244 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.46□□□□□ -0.73
CPSF7-209ENST00000463244 LCE2BO14633 110 aa10.45□□□□□ -0.74
CPSF7-209ENST00000463244 PPDPFLQ8WWR9 84 aa10.45□□□□□ -0.74
CPSF7-209ENST00000463244 H3BUT2 72 aa10.44□□□□□ -0.74
CPSF7-209ENST00000463244 SS18L2Q9UHA2 77 aa10.43□□□□□ -0.74
CPSF7-209ENST00000463244 MT1FP04733 61 aa10.42□□□□□ -0.74
CPSF7-209ENST00000463244 COA6Q5JTJ3 125 aaKnown RBP10.42□□□□□ -0.74
CPSF7-209ENST00000463244 SNHG12Q9BXW3 62 aa10.42□□□□□ -0.74
CPSF7-209ENST00000463244 SCGB1D1O95968 90 aa10.41□□□□□ -0.74
CPSF7-209ENST00000463244 KRTAP9-3Q9BYQ3 159 aa10.39□□□□□ -0.75
CPSF7-209ENST00000463244 FAM236DA0A1B0GTK5 79 aa10.36□□□□□ -0.75
CPSF7-209ENST00000463244 FAM236CP0DP71 79 aa10.36□□□□□ -0.75
CPSF7-209ENST00000463244 BVES-AS1Q5T3Y7 98 aa10.35□□□□□ -0.75
CPSF7-209ENST00000463244 KRTAP16-1A8MUX0 517 aa10.34□□□□□ -0.75
CPSF7-209ENST00000463244 SNRPEP62304 92 aaKnown RBP10.34□□□□□ -0.75
CPSF7-209ENST00000463244 TEN1Q86WV5 123 aa10.34□□□□□ -0.75
CPSF7-209ENST00000463244 MACF1Q9UPN3 7388 aaKnown RBP10.33□□□□□ -0.76
CPSF7-209ENST00000463244 DSCR10P59022 87 aa10.33□□□□□ -0.76
CPSF7-209ENST00000463244 KRTAP10-10P60014 251 aa10.33□□□□□ -0.76
CPSF7-209ENST00000463244 SYNE2Q8WXH0 6885 aaKnown RBP10.32□□□□□ -0.76
CPSF7-209ENST00000463244 A0A087WSZ3 146 aa10.31□□□□□ -0.76
CPSF7-209ENST00000463244 MPLKIPQ8TAP9 179 aa10.3□□□□□ -0.76
CPSF7-209ENST00000463244 C12orf57Q99622 126 aa10.28□□□□□ -0.76
CPSF7-209ENST00000463244 HRES1P13985 223 aa10.27□□□□□ -0.77
CPSF7-209ENST00000463244 RBM12B-AS1Q9P1G2 102 aa10.27□□□□□ -0.77
CPSF7-209ENST00000463244 NDUFV3P56181 108 aaKnown RBP10.24□□□□□ -0.77
CPSF7-209ENST00000463244 LINC00313P59037 77 aa10.23□□□□□ -0.77
CPSF7-209ENST00000463244 SIGMAR1Q99720 223 aa10.23□□□□□ -0.77
CPSF7-209ENST00000463244 HSBP1L1C9JCN9 74 aa10.2□□□□□ -0.78
CPSF7-209ENST00000463244 SNCGO76070 127 aa10.19□□□□□ -0.78
CPSF7-209ENST00000463244 H3BMG7 143 aa10.18□□□□□ -0.78
CPSF7-209ENST00000463244 NOTCH2NLQ7Z3S9 236 aa10.18□□□□□ -0.78
CPSF7-209ENST00000463244 FAM218AQ96MZ4 157 aa10.18□□□□□ -0.78
CPSF7-209ENST00000463244 HIST1H4GQ99525 98 aa10.18□□□□□ -0.78
CPSF7-209ENST00000463244 LINC00846Q9NV44 126 aa10.18□□□□□ -0.78
CPSF7-209ENST00000463244 KRTAP19-6Q3LI70 58 aa10.17□□□□□ -0.78
CPSF7-209ENST00000463244 A0A1W2PNM2 257 aa10.16□□□□□ -0.78
CPSF7-209ENST00000463244 H0YGX0 51 aa10.15□□□□□ -0.78
CPSF7-209ENST00000463244 IGKV4-1P06312 121 aa10.14□□□□□ -0.79
CPSF7-209ENST00000463244 HIST1H2BLQ99880 126 aa10.1□□□□□ -0.79
CPSF7-209ENST00000463244 GHRHP01286 108 aa10.09□□□□□ -0.79
CPSF7-209ENST00000463244 FABP2P12104 132 aa10.09□□□□□ -0.79
CPSF7-209ENST00000463244 HIST3H2BBQ8N257 126 aa10.09□□□□□ -0.79
CPSF7-209ENST00000463244 RAB37Q96AX2 223 aa10.09□□□□□ -0.79
CPSF7-209ENST00000463244 MTURNQ8N3F0 131 aa10.08□□□□□ -0.8
CPSF7-209ENST00000463244 TRBV7-4A0A0J9YYF1 115 aa10.06□□□□□ -0.8
CPSF7-209ENST00000463244 A0A1B0GX51 115 aa10.06□□□□□ -0.8
CPSF7-209ENST00000463244 A0A0B4J2C4 111 aa10.05□□□□□ -0.8
CPSF7-209ENST00000463244 COX8AP10176 69 aa10.05□□□□□ -0.8
CPSF7-209ENST00000463244 S100A2P29034 98 aa10.05□□□□□ -0.8
CPSF7-209ENST00000463244 LINC00472Q9H8W2 130 aa10.05□□□□□ -0.8
CPSF7-209ENST00000463244 IGHV6-1A0A0B4J1U7 121 aa10.04□□□□□ -0.8
CPSF7-209ENST00000463244 DEFB116Q30KQ4 102 aa10.04□□□□□ -0.8
CPSF7-209ENST00000463244 ANKRD29Q8N6D5 301 aa10.02□□□□□ -0.81
CPSF7-209ENST00000463244 DLEU1O43261 78 aa10.01□□□□□ -0.81
CPSF7-209ENST00000463244 KRTAP6-3Q3LI67 103 aa9.98□□□□□ -0.81
CPSF7-209ENST00000463244 A0A1B0GV72 72 aa9.96□□□□□ -0.82
CPSF7-209ENST00000463244 A8MWP4 228 aa9.96□□□□□ -0.82
CPSF7-209ENST00000463244 SPINK7P58062 85 aa9.95□□□□□ -0.82
CPSF7-209ENST00000463244 ZCCHC13Q8WW36 166 aaKnown RBP9.95□□□□□ -0.82
CPSF7-209ENST00000463244 HIGD1BQ9P298 99 aa9.95□□□□□ -0.82
CPSF7-209ENST00000463244 C8orf87E5RJ46 101 aa9.94□□□□□ -0.82
CPSF7-209ENST00000463244 CCKP06307 115 aa9.93□□□□□ -0.82
CPSF7-209ENST00000463244 A0A1B0GVX0 72 aa9.92□□□□□ -0.82
CPSF7-209ENST00000463244 TRACP01848 142 aa9.92□□□□□ -0.82
CPSF7-209ENST00000463244 PRO1854Q9UHT4 67 aa9.92□□□□□ -0.82
CPSF7-209ENST00000463244 TRIAP1O43715 76 aa9.91□□□□□ -0.82
CPSF7-209ENST00000463244 C14orf144Q96I85 54 aa9.91□□□□□ -0.82
CPSF7-209ENST00000463244 ORMDL1Q9P0S3 153 aa9.91□□□□□ -0.82
CPSF7-209ENST00000463244 Q8N9P0 234 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-209ENST00000463244 H3BQ85 93 aa9.89□□□□□ -0.83
CPSF7-209ENST00000463244 DNAL4O96015 105 aa9.88□□□□□ -0.83
CPSF7-209ENST00000463244 C2orf91Q6ZV80 131 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms