RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 HILPDAQ9Y5L2 63 aa-0.04□□□□□ -2.42
GPNMB-205ENST00000463011 ABCA13Q86UQ4 5058 aa-0.04□□□□□ -2.42
GPNMB-205ENST00000463011 SONP18583 2426 aaKnown RBP-0.04□□□□□ -2.42
GPNMB-205ENST00000463011 DEFB131BA0A096LNP1 70 aa-0.05□□□□□ -2.42
GPNMB-205ENST00000463011 PDCD5O14737 125 aa-0.05□□□□□ -2.42
GPNMB-205ENST00000463011 KRTAP20-1Q3LI63 56 aa-0.05□□□□□ -2.42
GPNMB-205ENST00000463011 UBL5Q9BZL1 73 aa-0.05□□□□□ -2.42
GPNMB-205ENST00000463011 DUOX2Q9NRD8 1548 aa-0.05□□□□□ -2.42
GPNMB-205ENST00000463011 BSNQ9UPA5 3926 aa-0.06□□□□□ -2.42
GPNMB-205ENST00000463011 MRPL33O75394 65 aaKnown RBP-0.06□□□□□ -2.42
GPNMB-205ENST00000463011 KCNQ1DNQ9H478 68 aa-0.06□□□□□ -2.42
GPNMB-205ENST00000463011 CDC42BPGQ6DT37 1551 aa-0.06□□□□□ -2.42
GPNMB-205ENST00000463011 KNL1Q8NG31 2342 aa-0.07□□□□□ -2.42
GPNMB-205ENST00000463011 MAP1BP46821 2468 aaKnown RBP-0.07□□□□□ -2.42
GPNMB-205ENST00000463011 DIP2AQ14689 1571 aa-0.07□□□□□ -2.42
GPNMB-205ENST00000463011 PRKDCP78527 4128 aaKnown RBP-0.07□□□□□ -2.42
GPNMB-205ENST00000463011 WNK1Q9H4A3 2382 aa-0.08□□□□□ -2.42
GPNMB-205ENST00000463011 APC2O95996 2303 aa-0.08□□□□□ -2.42
GPNMB-205ENST00000463011 ATXN8Q156A1 80 aa-0.08□□□□□ -2.42
GPNMB-205ENST00000463011 REV3LO60673 3130 aa-0.09□□□□□ -2.42
GPNMB-205ENST00000463011 HYDINQ4G0P3 5121 aa-0.09□□□□□ -2.42
GPNMB-205ENST00000463011 LRP2P98164 4655 aa-0.09□□□□□ -2.42
GPNMB-205ENST00000463011 PARP4Q9UKK3 1724 aaKnown RBP-0.09□□□□□ -2.42
GPNMB-205ENST00000463011 LYNX1G3V0Z9 82 aa-0.09□□□□□ -2.42
GPNMB-205ENST00000463011 IAPPP10997 89 aa-0.09□□□□□ -2.42
GPNMB-205ENST00000463011 ITSN1Q15811 1721 aa-0.1□□□□□ -2.42
GPNMB-205ENST00000463011 THOC2Q8NI27 1593 aaKnown RBP-0.1□□□□□ -2.42
GPNMB-205ENST00000463011 DEFB130BP0DP73 79 aa-0.1□□□□□ -2.43
GPNMB-205ENST00000463011 DEFB130AP0DP74 79 aa-0.1□□□□□ -2.43
GPNMB-205ENST00000463011 GNG13Q9P2W3 67 aa-0.1□□□□□ -2.43
GPNMB-205ENST00000463011 NRAPQ86VF7 1730 aa-0.1□□□□□ -2.43
GPNMB-205ENST00000463011 NSD1Q96L73 2696 aaPredicted RBP-0.1□□□□□ -2.43
GPNMB-205ENST00000463011 ACANP16112 2415 aa-0.11□□□□□ -2.43
GPNMB-205ENST00000463011 ASXL1Q8IXJ9 1541 aa-0.11□□□□□ -2.43
GPNMB-205ENST00000463011 STAB2Q8WWQ8 2551 aa-0.11□□□□□ -2.43
GPNMB-205ENST00000463011 PCNX1Q96RV3 2341 aa-0.11□□□□□ -2.43
GPNMB-205ENST00000463011 ABCA9Q8IUA7 1624 aa-0.11□□□□□ -2.43
GPNMB-205ENST00000463011 RNF17Q9BXT8 1623 aaKnown RBP-0.11□□□□□ -2.43
GPNMB-205ENST00000463011 TJP1Q07157 1748 aa-0.11□□□□□ -2.43
GPNMB-205ENST00000463011 SETXQ7Z333 2677 aaKnown RBP-0.11□□□□□ -2.43
GPNMB-205ENST00000463011 HECTD4Q9Y4D8 3996 aa-0.12□□□□□ -2.43
GPNMB-205ENST00000463011 CRIP1P50238 77 aa-0.12□□□□□ -2.43
GPNMB-205ENST00000463011 USH2AO75445 5202 aa-0.13□□□□□ -2.43
GPNMB-205ENST00000463011 LRP1BQ9NZR2 4599 aa-0.14□□□□□ -2.43
GPNMB-205ENST00000463011 ETDCA0A1B0GVM5 59 aa-0.14□□□□□ -2.43
GPNMB-205ENST00000463011 KRTAP6-2Q3LI66 62 aa-0.14□□□□□ -2.43
GPNMB-205ENST00000463011 ZC3H13Q5T200 1668 aaKnown RBP-0.14□□□□□ -2.43
GPNMB-205ENST00000463011 DOPEY1Q5JWR5 2465 aa-0.15□□□□□ -2.43
GPNMB-205ENST00000463011 FLNBO75369 2602 aaKnown RBP-0.15□□□□□ -2.43
GPNMB-205ENST00000463011 EPPK1P58107 5090 aaKnown RBP-0.16□□□□□ -2.43
GPNMB-205ENST00000463011 SPRR2AP35326 72 aa-0.16□□□□□ -2.44
GPNMB-205ENST00000463011 PDE4DIPQ5VU43 2346 aa-0.16□□□□□ -2.44
GPNMB-205ENST00000463011 KIAA0586Q9BVV6 1533 aa-0.17□□□□□ -2.44
GPNMB-205ENST00000463011 DCHS2Q6V1P9 2916 aa-0.17□□□□□ -2.44
GPNMB-205ENST00000463011 NHSQ6T4R5 1651 aa-0.18□□□□□ -2.44
GPNMB-205ENST00000463011 INO80Q9ULG1 1556 aaPredicted RBP-0.18□□□□□ -2.44
GPNMB-205ENST00000463011 HERC1Q15751 4861 aa-0.18□□□□□ -2.44
GPNMB-205ENST00000463011 FLNAP21333 2647 aaKnown RBP-0.19□□□□□ -2.44
GPNMB-205ENST00000463011 DNMBPQ6XZF7 1577 aa-0.19□□□□□ -2.44
GPNMB-205ENST00000463011 TRANK1O15050 2925 aa-0.2□□□□□ -2.44
GPNMB-205ENST00000463011 MADDQ8WXG6 1647 aa-0.2□□□□□ -2.44
GPNMB-205ENST00000463011 AKAP13Q12802 2813 aa-0.2□□□□□ -2.44
GPNMB-205ENST00000463011 HECTD1Q9ULT8 2610 aa-0.2□□□□□ -2.44
GPNMB-205ENST00000463011 H3BNG1 76 aa-0.2□□□□□ -2.44
GPNMB-205ENST00000463011 PRLHP81277 87 aa-0.2□□□□□ -2.44
GPNMB-205ENST00000463011 RIF1Q5UIP0 2472 aaKnown RBP-0.2□□□□□ -2.44
GPNMB-205ENST00000463011 DEFB114Q30KQ6 69 aa-0.21□□□□□ -2.44
GPNMB-205ENST00000463011 KRTAP6-1Q3LI64 71 aa-0.21□□□□□ -2.44
GPNMB-205ENST00000463011 DEFB106AQ8N104 65 aa-0.21□□□□□ -2.44
GPNMB-205ENST00000463011 EFCAB5A4FU69 1503 aa-0.23□□□□□ -2.45
GPNMB-205ENST00000463011 ABCC6O95255 1503 aa-0.23□□□□□ -2.45
GPNMB-205ENST00000463011 SETD2Q9BYW2 2564 aaPredicted RBP-0.23□□□□□ -2.45
GPNMB-205ENST00000463011 MINOS1Q5TGZ0 78 aa-0.23□□□□□ -2.45
GPNMB-205ENST00000463011 NBEAL2Q6ZNJ1 2754 aa-0.23□□□□□ -2.45
GPNMB-205ENST00000463011 C3P01024 1663 aa-0.24□□□□□ -2.45
GPNMB-205ENST00000463011 LINC01549A6NIU2 74 aa-0.24□□□□□ -2.45
GPNMB-205ENST00000463011 S4R3F8 94 aa-0.24□□□□□ -2.45
GPNMB-205ENST00000463011 PKHD1P08F94 4074 aa-0.24□□□□□ -2.45
GPNMB-205ENST00000463011 CREBBPQ92793 2442 aa-0.24□□□□□ -2.45
GPNMB-205ENST00000463011 MROH1Q8NDA8 1641 aa-0.24□□□□□ -2.45
GPNMB-205ENST00000463011 ZANQ9Y493 2812 aa-0.24□□□□□ -2.45
GPNMB-205ENST00000463011 TENM2Q9NT68 2774 aa-0.25□□□□□ -2.45
GPNMB-205ENST00000463011 SPRR2EP22531 72 aa-0.25□□□□□ -2.45
GPNMB-205ENST00000463011 ITSN2Q9NZM3 1697 aa-0.25□□□□□ -2.45
GPNMB-205ENST00000463011 C9orf92A6NGG3 77 aa-0.26□□□□□ -2.45
GPNMB-205ENST00000463011 NBASA2RRP1 2371 aa-0.27□□□□□ -2.45
GPNMB-205ENST00000463011 TNRC18O15417 2968 aaPredicted RBP-0.28□□□□□ -2.45
GPNMB-205ENST00000463011 RPS27P42677 84 aaKnown RBP-0.28□□□□□ -2.45
GPNMB-205ENST00000463011 KRTAP19-7Q3SYF9 63 aa-0.28□□□□□ -2.45
GPNMB-205ENST00000463011 RPS27LQ71UM5 84 aaKnown RBP-0.28□□□□□ -2.45
GPNMB-205ENST00000463011 FLGP20930 4061 aaPredicted RBP-0.28□□□□□ -2.45
GPNMB-205ENST00000463011 TEP1Q99973 2627 aaKnown RBP-0.28□□□□□ -2.45
GPNMB-205ENST00000463011 WT1-ASQ06250 92 aa-0.29□□□□□ -2.46
GPNMB-205ENST00000463011 SVEP1Q4LDE5 3571 aa-0.3□□□□□ -2.46
GPNMB-205ENST00000463011 NCBP2-AS2Q69YL0 99 aa-0.3□□□□□ -2.46
GPNMB-205ENST00000463011 C6orf48Q9UBA6 75 aa-0.3□□□□□ -2.46
GPNMB-205ENST00000463011 KIF1AQ12756 1690 aa-0.3□□□□□ -2.46
GPNMB-205ENST00000463011 PKD1P98161 4303 aa-0.31□□□□□ -2.46
GPNMB-205ENST00000463011 ANKRD36CQ5JPF3 1778 aa-0.31□□□□□ -2.46
GPNMB-205ENST00000463011 A0A087WWC5 75 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms