RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 A6NDN8 102 aa9.92□□□□□ -0.82
PTPN18-208ENST00000462996 ZNF815PA8K554 130 aa9.92□□□□□ -0.82
PTPN18-208ENST00000462996 LST1O00453 97 aa9.91□□□□□ -0.82
PTPN18-208ENST00000462996 MPLKIPQ8TAP9 179 aa9.91□□□□□ -0.82
PTPN18-208ENST00000462996 SNAPINO95295 136 aa9.89□□□□□ -0.83
PTPN18-208ENST00000462996 NEBP20929 6669 aa9.88□□□□□ -0.83
PTPN18-208ENST00000462996 TRGC2P03986 189 aa9.88□□□□□ -0.83
PTPN18-208ENST00000462996 HRES1P13985 223 aa9.87□□□□□ -0.83
PTPN18-208ENST00000462996 OCIAD2Q56VL3 154 aa9.87□□□□□ -0.83
PTPN18-208ENST00000462996 SMIM11BQ8TCY0 68 aa9.87□□□□□ -0.83
PTPN18-208ENST00000462996 TRAV13-2A0A0B4J235 113 aa9.86□□□□□ -0.83
PTPN18-208ENST00000462996 SLC7A5P1Q8MH63 180 aa9.86□□□□□ -0.83
PTPN18-208ENST00000462996 SVBPQ8N300 66 aa9.85□□□□□ -0.83
PTPN18-208ENST00000462996 RBM12B-AS1Q9P1G2 102 aa9.85□□□□□ -0.83
PTPN18-208ENST00000462996 NDUFA5Q16718 116 aa9.83□□□□□ -0.84
PTPN18-208ENST00000462996 Q6ZQY7 126 aa9.83□□□□□ -0.84
PTPN18-208ENST00000462996 LINC00575Q6W349 94 aa9.82□□□□□ -0.84
PTPN18-208ENST00000462996 SYS1-DBNDD2H3BUS1 97 aa9.8□□□□□ -0.84
PTPN18-208ENST00000462996 IFITM1P13164 125 aa9.79□□□□□ -0.84
PTPN18-208ENST00000462996 DSCR10P59022 87 aa9.79□□□□□ -0.84
PTPN18-208ENST00000462996 MUSTN1Q8IVN3 82 aa9.79□□□□□ -0.84
PTPN18-208ENST00000462996 NOTCH2NLQ7Z3S9 236 aa9.77□□□□□ -0.85
PTPN18-208ENST00000462996 COPS9Q8WXC6 57 aa9.77□□□□□ -0.85
PTPN18-208ENST00000462996 hADV29S1A0JD25 119 aa9.76□□□□□ -0.85
PTPN18-208ENST00000462996 LINC01545Q5VT33 79 aa9.76□□□□□ -0.85
PTPN18-208ENST00000462996 SCGB1D4Q6XE38 83 aa9.76□□□□□ -0.85
PTPN18-208ENST00000462996 MUC12Q9UKN1 5478 aa9.76□□□□□ -0.85
PTPN18-208ENST00000462996 H3BUT2 72 aa9.75□□□□□ -0.85
PTPN18-208ENST00000462996 VAMP3Q15836 100 aa9.74□□□□□ -0.85
PTPN18-208ENST00000462996 SS18L2Q9UHA2 77 aa9.74□□□□□ -0.85
PTPN18-208ENST00000462996 Q6ZVH6 145 aa9.71□□□□□ -0.86
PTPN18-208ENST00000462996 ANKRD39Q53RE8 183 aa9.69□□□□□ -0.86
PTPN18-208ENST00000462996 SNHG12Q9BXW3 62 aa9.69□□□□□ -0.86
PTPN18-208ENST00000462996 PET117Q6UWS5 81 aa9.68□□□□□ -0.86
PTPN18-208ENST00000462996 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.67□□□□□ -0.86
PTPN18-208ENST00000462996 KRTAP20-1Q3LI63 56 aa9.66□□□□□ -0.86
PTPN18-208ENST00000462996 Q8N9P0 234 aaPredicted RBP9.66□□□□□ -0.86
PTPN18-208ENST00000462996 PPDPFLQ8WWR9 84 aa9.66□□□□□ -0.86
PTPN18-208ENST00000462996 SCGB1D1O95968 90 aa9.65□□□□□ -0.86
PTPN18-208ENST00000462996 A0A087WSZ3 146 aa9.64□□□□□ -0.87
PTPN18-208ENST00000462996 LINC00313P59037 77 aa9.64□□□□□ -0.87
PTPN18-208ENST00000462996 TEN1Q86WV5 123 aa9.64□□□□□ -0.87
PTPN18-208ENST00000462996 COLCA2A8K830 154 aa9.62□□□□□ -0.87
PTPN18-208ENST00000462996 A8MWP4 228 aa9.61□□□□□ -0.87
PTPN18-208ENST00000462996 MTURNQ8N3F0 131 aa9.61□□□□□ -0.87
PTPN18-208ENST00000462996 SIGMAR1Q99720 223 aa9.6□□□□□ -0.87
PTPN18-208ENST00000462996 C3orf79P0CE67 100 aa9.59□□□□□ -0.87
PTPN18-208ENST00000462996 IGKV4-1P06312 121 aa9.51□□□□□ -0.89
PTPN18-208ENST00000462996 NDUFV3P56181 108 aaKnown RBP9.5□□□□□ -0.89
PTPN18-208ENST00000462996 ATOH7Q8N100 152 aa9.5□□□□□ -0.89
PTPN18-208ENST00000462996 HIST1H2BKO60814 126 aa9.49□□□□□ -0.89
PTPN18-208ENST00000462996 HIST1H2BJP06899 126 aa9.49□□□□□ -0.89
PTPN18-208ENST00000462996 HIST1H2BOP23527 126 aa9.49□□□□□ -0.89
PTPN18-208ENST00000462996 HIST1H2BBP33778 126 aa9.49□□□□□ -0.89
PTPN18-208ENST00000462996 HIST1H2BDP58876 126 aa9.49□□□□□ -0.89
PTPN18-208ENST00000462996 KRTDAPP60985 99 aa9.49□□□□□ -0.89
PTPN18-208ENST00000462996 HIST1H2BCP62807 126 aa9.49□□□□□ -0.89
PTPN18-208ENST00000462996 HIST2H2BEQ16778 126 aa9.49□□□□□ -0.89
PTPN18-208ENST00000462996 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.49□□□□□ -0.89
PTPN18-208ENST00000462996 HIST1H2BHQ93079 126 aa9.49□□□□□ -0.89
PTPN18-208ENST00000462996 HIST1H2BNQ99877 126 aa9.49□□□□□ -0.89
PTPN18-208ENST00000462996 HIST1H2BMQ99879 126 aa9.49□□□□□ -0.89
PTPN18-208ENST00000462996 BVES-AS1Q5T3Y7 98 aa9.48□□□□□ -0.89
PTPN18-208ENST00000462996 A0A1W2PNM2 257 aa9.46□□□□□ -0.9
PTPN18-208ENST00000462996 SPINK7P58062 85 aa9.46□□□□□ -0.9
PTPN18-208ENST00000462996 C12orf57Q99622 126 aa9.46□□□□□ -0.9
PTPN18-208ENST00000462996 H3BMG7 143 aa9.43□□□□□ -0.9
PTPN18-208ENST00000462996 DEFB116Q30KQ4 102 aa9.43□□□□□ -0.9
PTPN18-208ENST00000462996 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
PTPN18-208ENST00000462996 MDN1Q9NU22 5596 aa9.4□□□□□ -0.9
PTPN18-208ENST00000462996 ZCCHC13Q8WW36 166 aaKnown RBP9.39□□□□□ -0.91
PTPN18-208ENST00000462996 LINC00472Q9H8W2 130 aa9.37□□□□□ -0.91
PTPN18-208ENST00000462996 FAM218AQ96MZ4 157 aa9.36□□□□□ -0.91
PTPN18-208ENST00000462996 A6NN06 94 aa9.35□□□□□ -0.91
PTPN18-208ENST00000462996 WFDC13Q8IUB5 93 aa9.35□□□□□ -0.91
PTPN18-208ENST00000462996 KMT2DO14686 5537 aa9.34□□□□□ -0.91
PTPN18-208ENST00000462996 S100A1P23297 94 aa9.33□□□□□ -0.92
PTPN18-208ENST00000462996 KRTAP5-9P26371 169 aa9.33□□□□□ -0.92
PTPN18-208ENST00000462996 TRBV7-4A0A0J9YYF1 115 aa9.31□□□□□ -0.92
PTPN18-208ENST00000462996 SNCGO76070 127 aa9.31□□□□□ -0.92
PTPN18-208ENST00000462996 FABP2P12104 132 aa9.31□□□□□ -0.92
PTPN18-208ENST00000462996 SNRPEP62304 92 aaKnown RBP9.29□□□□□ -0.92
PTPN18-208ENST00000462996 COA6Q5JTJ3 125 aaKnown RBP9.29□□□□□ -0.92
PTPN18-208ENST00000462996 C8orf87E5RJ46 101 aa9.28□□□□□ -0.92
PTPN18-208ENST00000462996 A0A1B0GVX0 72 aa9.27□□□□□ -0.93
PTPN18-208ENST00000462996 H0YGX0 51 aa9.27□□□□□ -0.93
PTPN18-208ENST00000462996 RAB37Q96AX2 223 aa9.27□□□□□ -0.93
PTPN18-208ENST00000462996 GHRHP01286 108 aa9.26□□□□□ -0.93
PTPN18-208ENST00000462996 ANKRD29Q8N6D5 301 aa9.26□□□□□ -0.93
PTPN18-208ENST00000462996 HIST1H4GQ99525 98 aa9.23□□□□□ -0.93
PTPN18-208ENST00000462996 A0A1B0GV72 72 aa9.22□□□□□ -0.93
PTPN18-208ENST00000462996 MT1BP07438 61 aa9.22□□□□□ -0.93
PTPN18-208ENST00000462996 KRTAP2-3P0C7H8 128 aa9.22□□□□□ -0.93
PTPN18-208ENST00000462996 KRTAP2-4Q9BYR9 128 aa9.22□□□□□ -0.93
PTPN18-208ENST00000462996 H1FX-AS1Q4G0G2 97 aa9.19□□□□□ -0.94
PTPN18-208ENST00000462996 A0A1B0GX51 115 aa9.17□□□□□ -0.94
PTPN18-208ENST00000462996 TRACP01848 142 aa9.16□□□□□ -0.94
PTPN18-208ENST00000462996 CCKP06307 115 aa9.16□□□□□ -0.94
PTPN18-208ENST00000462996 KRTAP10-5P60370 271 aa9.14□□□□□ -0.95
PTPN18-208ENST00000462996 HSBP1L1C9JCN9 74 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms