RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 UBE2AP49459 152 aa10.61□□□□□ -0.71
ACTB-207ENST00000462494 DEFB116Q30KQ4 102 aa10.61□□□□□ -0.71
ACTB-207ENST00000462494 EPM2AB3EWF7 344 aa10.6□□□□□ -0.71
ACTB-207ENST00000462494 A0A0U1RQV1 116 aa10.59□□□□□ -0.71
ACTB-207ENST00000462494 C4orf26Q17RF5 130 aa10.58□□□□□ -0.72
ACTB-207ENST00000462494 A0A087WSZ3 146 aa10.58□□□□□ -0.72
ACTB-207ENST00000462494 SRRM2Q9UQ35 2752 aaKnown RBP10.57□□□□□ -0.72
ACTB-207ENST00000462494 Q5XG85 94 aa10.57□□□□□ -0.72
ACTB-207ENST00000462494 DYNC2H1Q8NCM8 4307 aaKnown RBP10.56□□□□□ -0.72
ACTB-207ENST00000462494 C9orf163Q8N9P6 203 aa10.55□□□□□ -0.72
ACTB-207ENST00000462494 B9D2Q9BPU9 175 aa10.55□□□□□ -0.72
ACTB-207ENST00000462494 IGLV8-61A0A075B6I0 122 aa10.54□□□□□ -0.72
ACTB-207ENST00000462494 LRCOL1A6NCL2 159 aa10.54□□□□□ -0.72
ACTB-207ENST00000462494 PLECQ15149 4684 aaKnown RBP10.54□□□□□ -0.72
ACTB-207ENST00000462494 NBDYA0A0U1RRE5 68 aa10.54□□□□□ -0.72
ACTB-207ENST00000462494 MDFIQ99750 246 aa10.53□□□□□ -0.72
ACTB-207ENST00000462494 HCG22E2RYF7 251 aa10.53□□□□□ -0.72
ACTB-207ENST00000462494 ATP5EP56381 51 aaPredicted RBP10.53□□□□□ -0.72
ACTB-207ENST00000462494 HRCT1Q6UXD1 115 aa10.51□□□□□ -0.73
ACTB-207ENST00000462494 PANO1I0J062 215 aa10.5□□□□□ -0.73
ACTB-207ENST00000462494 H0Y9J4 135 aa10.5□□□□□ -0.73
ACTB-207ENST00000462494 RPL37AP61513 92 aaKnown RBP10.5□□□□□ -0.73
ACTB-207ENST00000462494 C5orf47Q569G3 176 aa10.49□□□□□ -0.73
ACTB-207ENST00000462494 WFDC13Q8IUB5 93 aa10.48□□□□□ -0.73
ACTB-207ENST00000462494 NUPR2A6NF83 97 aa10.48□□□□□ -0.73
ACTB-207ENST00000462494 LINC00474Q9P2X8 69 aa10.48□□□□□ -0.73
ACTB-207ENST00000462494 Q6ZRN7 208 aaPredicted RBP10.46□□□□□ -0.73
ACTB-207ENST00000462494 PKIGQ9Y2B9 76 aa10.46□□□□□ -0.73
ACTB-207ENST00000462494 LCE6AA0A183 80 aa10.46□□□□□ -0.74
ACTB-207ENST00000462494 SPRR1BP22528 89 aa10.46□□□□□ -0.74
ACTB-207ENST00000462494 SMIM26A0A096LP01 95 aa10.45□□□□□ -0.74
ACTB-207ENST00000462494 FP248Q71RG6 208 aaPredicted RBP10.42□□□□□ -0.74
ACTB-207ENST00000462494 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.42□□□□□ -0.74
ACTB-207ENST00000462494 STARD9Q9P2P6 4700 aa10.39□□□□□ -0.75
ACTB-207ENST00000462494 FAM229BQ4G0N7 80 aa10.39□□□□□ -0.75
ACTB-207ENST00000462494 KRTAP13-1Q8IUC0 172 aa10.38□□□□□ -0.75
ACTB-207ENST00000462494 SPACA4Q8TDM5 124 aa10.38□□□□□ -0.75
ACTB-207ENST00000462494 ZCCHC13Q8WW36 166 aaKnown RBP10.38□□□□□ -0.75
ACTB-207ENST00000462494 IGLV9-49A0A0B4J1Y8 123 aa10.37□□□□□ -0.75
ACTB-207ENST00000462494 LINC00472Q9H8W2 130 aa10.37□□□□□ -0.75
ACTB-207ENST00000462494 PRR15Q8IV56 129 aa10.36□□□□□ -0.75
ACTB-207ENST00000462494 CASC2Q6XLA1 102 aa10.35□□□□□ -0.75
ACTB-207ENST00000462494 A0A087WTM6 91 aa10.35□□□□□ -0.75
ACTB-207ENST00000462494 A8MWP4 228 aa10.34□□□□□ -0.75
ACTB-207ENST00000462494 KRTAP29-1A8MX34 341 aaPredicted RBP10.34□□□□□ -0.75
ACTB-207ENST00000462494 VPS13DQ5THJ4 4388 aa10.33□□□□□ -0.76
ACTB-207ENST00000462494 MP68P56378 58 aa10.33□□□□□ -0.76
ACTB-207ENST00000462494 MPLKIPQ8TAP9 179 aa10.33□□□□□ -0.76
ACTB-207ENST00000462494 HECTD4Q9Y4D8 3996 aa10.32□□□□□ -0.76
ACTB-207ENST00000462494 PRKDCP78527 4128 aaKnown RBP10.31□□□□□ -0.76
ACTB-207ENST00000462494 PRR4Q16378 134 aa10.31□□□□□ -0.76
ACTB-207ENST00000462494 RTL8CO15255 209 aa10.3□□□□□ -0.76
ACTB-207ENST00000462494 LINC00208Q96KT6 92 aa10.3□□□□□ -0.76
ACTB-207ENST00000462494 KMT2AQ03164 3969 aa10.29□□□□□ -0.76
ACTB-207ENST00000462494 C1orf64Q8NEQ6 169 aa10.27□□□□□ -0.77
ACTB-207ENST00000462494 PSORS1C2Q9UIG4 136 aa10.27□□□□□ -0.77
ACTB-207ENST00000462494 FRAS1Q86XX4 4008 aa10.26□□□□□ -0.77
ACTB-207ENST00000462494 hDV103S1A0JD37 113 aa10.26□□□□□ -0.77
ACTB-207ENST00000462494 H0Y9P7 68 aa10.26□□□□□ -0.77
ACTB-207ENST00000462494 NDUFB1O75438 58 aa10.25□□□□□ -0.77
ACTB-207ENST00000462494 LINC00336Q6ZUF6 198 aa10.25□□□□□ -0.77
ACTB-207ENST00000462494 TRAV22A0A0B4J277 110 aa10.25□□□□□ -0.77
ACTB-207ENST00000462494 DNAH2Q9P225 4427 aa10.24□□□□□ -0.77
ACTB-207ENST00000462494 ANAPC11Q9NYG5 84 aa10.24□□□□□ -0.77
ACTB-207ENST00000462494 LINC00483Q53H64 154 aa10.23□□□□□ -0.77
ACTB-207ENST00000462494 IGLV5-52A0A0A0MRZ9 124 aa10.23□□□□□ -0.77
ACTB-207ENST00000462494 MMP24-AS1A0A0U1RRL7 71 aa10.22□□□□□ -0.77
ACTB-207ENST00000462494 ZNF706Q9Y5V0 76 aaPredicted RBP10.22□□□□□ -0.77
ACTB-207ENST00000462494 MOBPQ13875 183 aa10.22□□□□□ -0.77
ACTB-207ENST00000462494 Q96NJ1 140 aa10.21□□□□□ -0.77
ACTB-207ENST00000462494 Q6ZR54 194 aa10.21□□□□□ -0.78
ACTB-207ENST00000462494 WWC2-AS2Q96NR7 200 aa10.19□□□□□ -0.78
ACTB-207ENST00000462494 PLAC8Q9NZF1 115 aa10.19□□□□□ -0.78
ACTB-207ENST00000462494 ZNF861PO60384 105 aa10.18□□□□□ -0.78
ACTB-207ENST00000462494 CYP4F30PQ9H0H9 118 aa10.18□□□□□ -0.78
ACTB-207ENST00000462494 MEGF8Q7Z7M0 2845 aa10.17□□□□□ -0.78
ACTB-207ENST00000462494 DNAH8Q96JB1 4490 aa10.17□□□□□ -0.78
ACTB-207ENST00000462494 H3BPC8 53 aa10.16□□□□□ -0.78
ACTB-207ENST00000462494 DNAH17Q9UFH2 4485 aa10.16□□□□□ -0.78
ACTB-207ENST00000462494 C1orf134Q5TEV5 83 aa10.15□□□□□ -0.78
ACTB-207ENST00000462494 TGP01266 2768 aa10.15□□□□□ -0.78
ACTB-207ENST00000462494 IGHV6-1A0A0B4J1U7 121 aa10.14□□□□□ -0.79
ACTB-207ENST00000462494 FBN3Q75N90 2809 aa10.14□□□□□ -0.79
ACTB-207ENST00000462494 C8orf17Q9NRJ1 99 aa10.13□□□□□ -0.79
ACTB-207ENST00000462494 CDK2AP2O75956 126 aa10.12□□□□□ -0.79
ACTB-207ENST00000462494 BRK1Q8WUW1 75 aa10.11□□□□□ -0.79
ACTB-207ENST00000462494 PRO0628Q9UI54 55 aa10.11□□□□□ -0.79
ACTB-207ENST00000462494 LY6G6CO95867 125 aa10.11□□□□□ -0.79
ACTB-207ENST00000462494 NDUFS5O43920 106 aa10.1□□□□□ -0.79
ACTB-207ENST00000462494 A0A1B0GVX0 72 aa10.09□□□□□ -0.79
ACTB-207ENST00000462494 SPANXA2-OT1Q8N9U9 137 aa10.09□□□□□ -0.79
ACTB-207ENST00000462494 ASB16-AS1Q495Z4 193 aa10.07□□□□□ -0.8
ACTB-207ENST00000462494 IGLV7-43P04211 117 aa10.07□□□□□ -0.8
ACTB-207ENST00000462494 Q1T7F1 81 aa10.07□□□□□ -0.8
ACTB-207ENST00000462494 TP53AIP1Q9HCN2 124 aa10.06□□□□□ -0.8
ACTB-207ENST00000462494 PCOTHQ58A44 107 aa10.05□□□□□ -0.8
ACTB-207ENST00000462494 SPINK6Q6UWN8 80 aa10.05□□□□□ -0.8
ACTB-207ENST00000462494 DNAH6Q9C0G6 4158 aa10.04□□□□□ -0.8
ACTB-207ENST00000462494 CIRBP-AS1Q8TBR5 109 aa10.04□□□□□ -0.8
ACTB-207ENST00000462494 A0A087X002 238 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms