RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 LIMD2Q9BT23 127 aa5.16□□□□□ -1.58
ERCC8-204ENST00000462279 IGLV1-50A0A075B6I6 118 aa5.16□□□□□ -1.58
ERCC8-204ENST00000462279 KTN1-AS1Q86SY8 53 aa5.16□□□□□ -1.58
ERCC8-204ENST00000462279 RBM12B-AS1Q9P1G2 102 aa5.16□□□□□ -1.58
ERCC8-204ENST00000462279 LINC00588Q9Y4M8 146 aa5.16□□□□□ -1.58
ERCC8-204ENST00000462279 FBN1P35555 2871 aaKnown RBP5.16□□□□□ -1.58
ERCC8-204ENST00000462279 IGFL1Q6UW32 110 aa5.15□□□□□ -1.59
ERCC8-204ENST00000462279 CASC2Q6XLA1 102 aa5.14□□□□□ -1.59
ERCC8-204ENST00000462279 NOTCH1P46531 2555 aa5.14□□□□□ -1.59
ERCC8-204ENST00000462279 KRTAP4-16G5E9R7 235 aaPredicted RBP5.14□□□□□ -1.59
ERCC8-204ENST00000462279 LCA10Q71F78 164 aa5.14□□□□□ -1.59
ERCC8-204ENST00000462279 COL6A5A8TX70 2615 aa5.13□□□□□ -1.59
ERCC8-204ENST00000462279 MAST4O15021 2626 aa5.13□□□□□ -1.59
ERCC8-204ENST00000462279 A0A096LNI7 61 aa5.13□□□□□ -1.59
ERCC8-204ENST00000462279 PRLHP81277 87 aa5.13□□□□□ -1.59
ERCC8-204ENST00000462279 PCOTHQ58A44 107 aa5.13□□□□□ -1.59
ERCC8-204ENST00000462279 SMR3AQ99954 134 aa5.12□□□□□ -1.59
ERCC8-204ENST00000462279 SPAG11AQ6PDA7 123 aa5.11□□□□□ -1.59
ERCC8-204ENST00000462279 COA5Q86WW8 74 aa5.11□□□□□ -1.59
ERCC8-204ENST00000462279 HECTD1Q9ULT8 2610 aa5.11□□□□□ -1.59
ERCC8-204ENST00000462279 CASC10Q5T4H9 136 aa5.11□□□□□ -1.59
ERCC8-204ENST00000462279 H0Y9J4 135 aa5.11□□□□□ -1.59
ERCC8-204ENST00000462279 SPRR1AP35321 89 aa5.11□□□□□ -1.59
ERCC8-204ENST00000462279 ATP11AUNQ6ZP68 121 aa5.11□□□□□ -1.59
ERCC8-204ENST00000462279 KRTAP7-1Q8IUC3 87 aa5.11□□□□□ -1.59
ERCC8-204ENST00000462279 LYSTQ99698 3801 aa5.1□□□□□ -1.59
ERCC8-204ENST00000462279 REG3GQ6UW15 175 aa5.1□□□□□ -1.59
ERCC8-204ENST00000462279 SPANXA2-OT1Q8N9U9 137 aa5.1□□□□□ -1.59
ERCC8-204ENST00000462279 IGKV2-24A0A0C4DH68 120 aa5.1□□□□□ -1.59
ERCC8-204ENST00000462279 KRTAP1-1Q07627 177 aa5.1□□□□□ -1.59
ERCC8-204ENST00000462279 NSD1Q96L73 2696 aaPredicted RBP5.09□□□□□ -1.59
ERCC8-204ENST00000462279 COL7A1Q02388 2944 aa5.09□□□□□ -1.6
ERCC8-204ENST00000462279 KRTAP29-1A8MX34 341 aaPredicted RBP5.09□□□□□ -1.6
ERCC8-204ENST00000462279 TENM4Q6N022 2769 aa5.09□□□□□ -1.6
ERCC8-204ENST00000462279 NBEAL1Q6ZS30 2694 aa5.08□□□□□ -1.6
ERCC8-204ENST00000462279 CSMD3Q7Z407 3707 aa5.08□□□□□ -1.6
ERCC8-204ENST00000462279 CNBPP62633 177 aaKnown RBP5.08□□□□□ -1.6
ERCC8-204ENST00000462279 Q75L30 129 aa5.08□□□□□ -1.6
ERCC8-204ENST00000462279 LINC01556Q5JQF7 62 aa5.08□□□□□ -1.6
ERCC8-204ENST00000462279 LOC101927531A0A1B0GV80 90 aa5.07□□□□□ -1.6
ERCC8-204ENST00000462279 DEFB131BA0A096LNP1 70 aa5.06□□□□□ -1.6
ERCC8-204ENST00000462279 A6NN06 94 aa5.06□□□□□ -1.6
ERCC8-204ENST00000462279 NDUFS5O43920 106 aa5.06□□□□□ -1.6
ERCC8-204ENST00000462279 C9orf163Q8N9P6 203 aa5.06□□□□□ -1.6
ERCC8-204ENST00000462279 PLA2G2DQ9UNK4 145 aa5.06□□□□□ -1.6
ERCC8-204ENST00000462279 H3BPC8 53 aa5.06□□□□□ -1.6
ERCC8-204ENST00000462279 TLX1NBP0CAT3 122 aa5.06□□□□□ -1.6
ERCC8-204ENST00000462279 CDC42SE1Q9NRR8 79 aa5.06□□□□□ -1.6
ERCC8-204ENST00000462279 STAB1Q9NY15 2570 aa5.05□□□□□ -1.6
ERCC8-204ENST00000462279 A8MWP4 228 aa5.04□□□□□ -1.6
ERCC8-204ENST00000462279 IGLV5-37A0A075B6J1 123 aa5.04□□□□□ -1.6
ERCC8-204ENST00000462279 MOBPQ13875 183 aa5.04□□□□□ -1.6
ERCC8-204ENST00000462279 SPINK7P58062 85 aa5.04□□□□□ -1.6
ERCC8-204ENST00000462279 H3BNG1 76 aa5.03□□□□□ -1.6
ERCC8-204ENST00000462279 IGLV7-46A0A075B6I9 117 aa5.03□□□□□ -1.6
ERCC8-204ENST00000462279 C7orf65Q6ZTY9 151 aa5.03□□□□□ -1.6
ERCC8-204ENST00000462279 PHF5AQ7RTV0 110 aaKnown RBP5.03□□□□□ -1.6
ERCC8-204ENST00000462279 OXLD1Q5BKU9 147 aa5.03□□□□□ -1.6
ERCC8-204ENST00000462279 TENM2Q9NT68 2774 aa5.02□□□□□ -1.61
ERCC8-204ENST00000462279 C11orf45Q8TAV5 145 aa5.01□□□□□ -1.61
ERCC8-204ENST00000462279 LINC00472Q9H8W2 130 aa5.01□□□□□ -1.61
ERCC8-204ENST00000462279 MMP24-AS1A0A0U1RRL7 71 aa5□□□□□ -1.61
ERCC8-204ENST00000462279 DNAH10OSP0CZ25 163 aa5□□□□□ -1.61
ERCC8-204ENST00000462279 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
ERCC8-204ENST00000462279 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
ERCC8-204ENST00000462279 IGLV8-61A0A075B6I0 122 aa4.99□□□□□ -1.61
ERCC8-204ENST00000462279 CHTF8P0CG12 524 aa4.98□□□□□ -1.61
ERCC8-204ENST00000462279 DYNC2H1Q8NCM8 4307 aaKnown RBP4.98□□□□□ -1.61
ERCC8-204ENST00000462279 HRES1P13985 223 aa4.97□□□□□ -1.61
ERCC8-204ENST00000462279 PRR26Q8N8Z3 221 aa4.97□□□□□ -1.61
ERCC8-204ENST00000462279 FBN3Q75N90 2809 aa4.97□□□□□ -1.61
ERCC8-204ENST00000462279 IGHV6-1A0A0B4J1U7 121 aa4.97□□□□□ -1.61
ERCC8-204ENST00000462279 INAFM1C9JVW0 142 aa4.97□□□□□ -1.61
ERCC8-204ENST00000462279 IGLV9-49A0A0B4J1Y8 123 aa4.97□□□□□ -1.61
ERCC8-204ENST00000462279 KRTAP11-1Q8IUC1 163 aa4.97□□□□□ -1.61
ERCC8-204ENST00000462279 LINC00313P59037 77 aa4.95□□□□□ -1.62
ERCC8-204ENST00000462279 STAB2Q8WWQ8 2551 aa4.95□□□□□ -1.62
ERCC8-204ENST00000462279 ADM2Q7Z4H4 148 aa4.94□□□□□ -1.62
ERCC8-204ENST00000462279 KRTAP10-11P60412 298 aa4.94□□□□□ -1.62
ERCC8-204ENST00000462279 C8orf87E5RJ46 101 aa4.94□□□□□ -1.62
ERCC8-204ENST00000462279 DNAH10Q8IVF4 4471 aa4.93□□□□□ -1.62
ERCC8-204ENST00000462279 TP53AIP1Q9HCN2 124 aa4.93□□□□□ -1.62
ERCC8-204ENST00000462279 C8orf17Q9NRJ1 99 aa4.93□□□□□ -1.62
ERCC8-204ENST00000462279 PLAC8Q9NZF1 115 aa4.93□□□□□ -1.62
ERCC8-204ENST00000462279 K7EIL1 84 aa4.92□□□□□ -1.62
ERCC8-204ENST00000462279 CDK2AP2O75956 126 aa4.92□□□□□ -1.62
ERCC8-204ENST00000462279 C4orf48Q5BLP8 95 aa4.91□□□□□ -1.62
ERCC8-204ENST00000462279 A0A087X002 238 aa4.9□□□□□ -1.63
ERCC8-204ENST00000462279 NOTCH2NLQ7Z3S9 236 aa4.9□□□□□ -1.63
ERCC8-204ENST00000462279 MGAM2Q2M2H8 2515 aa4.89□□□□□ -1.63
ERCC8-204ENST00000462279 DNAH9Q9NYC9 4486 aa4.89□□□□□ -1.63
ERCC8-204ENST00000462279 Q6ZR54 194 aa4.89□□□□□ -1.63
ERCC8-204ENST00000462279 DNAH7Q8WXX0 4024 aa4.89□□□□□ -1.63
ERCC8-204ENST00000462279 SPINK6Q6UWN8 80 aa4.89□□□□□ -1.63
ERCC8-204ENST00000462279 SPRR1BP22528 89 aa4.88□□□□□ -1.63
ERCC8-204ENST00000462279 Q96NJ1 140 aa4.88□□□□□ -1.63
ERCC8-204ENST00000462279 MRPL34Q9BQ48 92 aaKnown RBP4.88□□□□□ -1.63
ERCC8-204ENST00000462279 A0A1B0GVX0 72 aa4.87□□□□□ -1.63
ERCC8-204ENST00000462279 KRTAP1-5Q9BYS1 174 aa4.87□□□□□ -1.63
ERCC8-204ENST00000462279 MDFIQ99750 246 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms