RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 MYO9AB2RTY4 2548 aa0.63□□□□□ -2.31
HDAC6-212ENST00000461608 LAMA1P25391 3075 aa0.63□□□□□ -2.31
HDAC6-212ENST00000461608 ABCA2Q9BZC7 2435 aa0.63□□□□□ -2.31
HDAC6-212ENST00000461608 WDR87Q6ZQQ6 2873 aa0.63□□□□□ -2.31
HDAC6-212ENST00000461608 DSPP15924 2871 aaKnown RBP0.62□□□□□ -2.31
HDAC6-212ENST00000461608 A0A087WXM4 84 aa0.62□□□□□ -2.31
HDAC6-212ENST00000461608 SPTY2D1-AS1A0A0U1RR47 76 aa0.62□□□□□ -2.31
HDAC6-212ENST00000461608 A0A1B0GU69 56 aa0.62□□□□□ -2.31
HDAC6-212ENST00000461608 UBE2DNLQ8IWF7 75 aa0.62□□□□□ -2.31
HDAC6-212ENST00000461608 UBE2D4Q9Y2X8 147 aa0.62□□□□□ -2.31
HDAC6-212ENST00000461608 U3KQA8 63 aa0.62□□□□□ -2.31
HDAC6-212ENST00000461608 MGAQ8IWI9 3026 aa0.62□□□□□ -2.31
HDAC6-212ENST00000461608 USP9YO00507 2555 aaPredicted RBP0.62□□□□□ -2.31
HDAC6-212ENST00000461608 TLN1Q9Y490 2541 aaKnown RBP0.62□□□□□ -2.31
HDAC6-212ENST00000461608 PIEZO2Q9H5I5 2752 aa0.62□□□□□ -2.31
HDAC6-212ENST00000461608 SPG11Q96JI7 2443 aa0.62□□□□□ -2.31
HDAC6-212ENST00000461608 NBEAQ8NFP9 2946 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 CSPG4Q6UVK1 2322 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 ATMQ13315 3056 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 ANKRD17O75179 2603 aaKnown RBP0.61□□□□□ -2.31
HDAC6-212ENST00000461608 LRRK2Q5S007 2527 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 ABCA1O95477 2261 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 FBN2P35556 2912 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 TRBV6-1A0A0K0K1D8 114 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 A0A1B0GUT8 65 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 UMAD1C9J7I0 102 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 H3BVH4 76 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 COX6B1P14854 86 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 DEFB133Q30KQ1 61 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 DEFB112Q30KQ8 113 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 DEFB109BQ30KR1 87 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 DEFB121Q5J5C9 76 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 HEPN1Q6WQI6 88 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 HILPDAQ9Y5L2 63 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 ZFHX3Q15911 3703 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 RELNP78509 3460 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 POLQO75417 2590 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 DNAJC13O75165 2243 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 BIRC6Q9NR09 4857 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 TENM4Q6N022 2769 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 COL12A1Q99715 3063 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 ITPR3Q14573 2671 aa0.61□□□□□ -2.31
HDAC6-212ENST00000461608 ITPR2Q14571 2701 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 UBR5O95071 2799 aaPredicted RBP0.6□□□□□ -2.31
HDAC6-212ENST00000461608 ITPR1Q14643 2758 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 TRAV21A0A0B4J279 112 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 LINC00959A0A1B0GUT2 108 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 PIN1P1O15428 100 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 KALRNO60229 2985 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 IFI6P09912 130 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 WFDC9Q8NEX5 89 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 GAFA1Q96PS6 74 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 C10orf95Q9H7T3 257 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 CRIPTQ9P021 101 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 AKAP6Q13023 2319 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 TEX15Q9BXT5 2789 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 BOD1L1Q8NFC6 3051 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 SPENQ96T58 3664 aaKnown RBP0.6□□□□□ -2.31
HDAC6-212ENST00000461608 ANKHD1Q8IWZ3 2542 aaKnown RBP0.6□□□□□ -2.31
HDAC6-212ENST00000461608 CSMD1Q96PZ7 3565 aa0.6□□□□□ -2.31
HDAC6-212ENST00000461608 ZNF469Q96JG9 3925 aaPredicted RBP0.59□□□□□ -2.31
HDAC6-212ENST00000461608 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
HDAC6-212ENST00000461608 ACANP16112 2415 aa0.59□□□□□ -2.31
HDAC6-212ENST00000461608 CCDC168Q8NDH2 2452 aa0.59□□□□□ -2.31
HDAC6-212ENST00000461608 PDZD2O15018 2839 aa0.59□□□□□ -2.31
HDAC6-212ENST00000461608 MTORP42345 2549 aa0.59□□□□□ -2.31
HDAC6-212ENST00000461608 CADP27708 2225 aa0.59□□□□□ -2.31
HDAC6-212ENST00000461608 USF3Q68DE3 2245 aa0.59□□□□□ -2.31
HDAC6-212ENST00000461608 A0A0D9SG42 100 aa0.59□□□□□ -2.31
HDAC6-212ENST00000461608 IFI27P40305 119 aaPredicted RBP0.59□□□□□ -2.31
HDAC6-212ENST00000461608 HIVEP1P15822 2718 aa0.59□□□□□ -2.32
HDAC6-212ENST00000461608 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.59□□□□□ -2.32
HDAC6-212ENST00000461608 CELSR1Q9NYQ6 3014 aa0.59□□□□□ -2.32
HDAC6-212ENST00000461608 ADGRG4Q8IZF6 3080 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 NOTCH1P46531 2555 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 SETD2Q9BYW2 2564 aaPredicted RBP0.58□□□□□ -2.32
HDAC6-212ENST00000461608 CSMD2Q7Z408 3487 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 CRYBG3Q68DQ2 2970 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 APCP25054 2843 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 TRBV7-4A0A0J9YYF1 115 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 TFF3Q07654 80 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 DEFB106AQ8N104 65 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 COX14Q96I36 57 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 SMR3AQ99954 134 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 OTOGQ6ZRI0 2925 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 CELSR2Q9HCU4 2923 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 ATRQ13535 2644 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 JMJD1CQ15652 2540 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 FLNCQ14315 2725 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 RYR3Q15413 4870 aa0.58□□□□□ -2.32
HDAC6-212ENST00000461608 SONP18583 2426 aaKnown RBP0.57□□□□□ -2.32
HDAC6-212ENST00000461608 PCLOQ9Y6V0 5065 aa0.57□□□□□ -2.32
HDAC6-212ENST00000461608 AKAP9Q99996 3911 aa0.57□□□□□ -2.32
HDAC6-212ENST00000461608 FXYD6-FXYD2A0A087WZ82 144 aa0.57□□□□□ -2.32
HDAC6-212ENST00000461608 KRTAP19-3Q7Z4W3 81 aa0.57□□□□□ -2.32
HDAC6-212ENST00000461608 GNG13Q9P2W3 67 aa0.57□□□□□ -2.32
HDAC6-212ENST00000461608 HYDINQ4G0P3 5121 aa0.57□□□□□ -2.32
HDAC6-212ENST00000461608 UTP20O75691 2785 aaKnown RBP0.57□□□□□ -2.32
HDAC6-212ENST00000461608 RYR2Q92736 4967 aa0.56□□□□□ -2.32
HDAC6-212ENST00000461608 COL6A5A8TX70 2615 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms