RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 Q6ZQT0 140 aa4.61□□□□□ -1.67
LSG1-205ENST00000461343 LINC00643Q86TS7 51 aa4.61□□□□□ -1.67
LSG1-205ENST00000461343 HECTD4Q9Y4D8 3996 aa4.6□□□□□ -1.67
LSG1-205ENST00000461343 DNAH17Q9UFH2 4485 aa4.6□□□□□ -1.67
LSG1-205ENST00000461343 LINC01547P58512 204 aaPredicted RBP4.6□□□□□ -1.67
LSG1-205ENST00000461343 LINC00483Q53H64 154 aa4.6□□□□□ -1.67
LSG1-205ENST00000461343 SIGMAR1Q99720 223 aa4.6□□□□□ -1.67
LSG1-205ENST00000461343 DNAH2Q9P225 4427 aa4.59□□□□□ -1.67
LSG1-205ENST00000461343 A0A1B0GVY2 172 aa4.59□□□□□ -1.67
LSG1-205ENST00000461343 SPRR4Q96PI1 79 aa4.59□□□□□ -1.67
LSG1-205ENST00000461343 IMUPQ9GZP8 106 aa4.59□□□□□ -1.67
LSG1-205ENST00000461343 ERC2-IT1O76042 136 aa4.58□□□□□ -1.68
LSG1-205ENST00000461343 FAM229BQ4G0N7 80 aa4.58□□□□□ -1.68
LSG1-205ENST00000461343 ST20-AS1Q8NBB2 130 aa4.58□□□□□ -1.68
LSG1-205ENST00000461343 FRAS1Q86XX4 4008 aa4.58□□□□□ -1.68
LSG1-205ENST00000461343 Q6Q795 121 aa4.57□□□□□ -1.68
LSG1-205ENST00000461343 Q8NBF4 154 aa4.57□□□□□ -1.68
LSG1-205ENST00000461343 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
LSG1-205ENST00000461343 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
LSG1-205ENST00000461343 FAM30AQ9NZY2 134 aa4.57□□□□□ -1.68
LSG1-205ENST00000461343 SS18L2Q9UHA2 77 aa4.57□□□□□ -1.68
LSG1-205ENST00000461343 PLA2G1BP04054 148 aaKnown RBP4.56□□□□□ -1.68
LSG1-205ENST00000461343 SCGB1A1P11684 91 aa4.56□□□□□ -1.68
LSG1-205ENST00000461343 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
LSG1-205ENST00000461343 SPINK6Q6UWN8 80 aa4.56□□□□□ -1.68
LSG1-205ENST00000461343 KRTAP11-1Q8IUC1 163 aa4.56□□□□□ -1.68
LSG1-205ENST00000461343 A0A1B0GV72 72 aa4.55□□□□□ -1.68
LSG1-205ENST00000461343 CRYGAP11844 174 aa4.55□□□□□ -1.68
LSG1-205ENST00000461343 CXCL6P80162 114 aa4.55□□□□□ -1.68
LSG1-205ENST00000461343 NREPQ16612 68 aa4.55□□□□□ -1.68
LSG1-205ENST00000461343 C9orf153Q5TBE3 101 aa4.55□□□□□ -1.68
LSG1-205ENST00000461343 SSBP3-AS1Q7Z2R9 100 aa4.55□□□□□ -1.68
LSG1-205ENST00000461343 SMIM29Q86T20 159 aa4.55□□□□□ -1.68
LSG1-205ENST00000461343 CDIP1Q9H305 208 aa4.55□□□□□ -1.68
LSG1-205ENST00000461343 TRBV7-7A0A0K0K1E9 115 aa4.54□□□□□ -1.68
LSG1-205ENST00000461343 FAM229AH3BQW9 127 aa4.54□□□□□ -1.68
LSG1-205ENST00000461343 CDK2AP2O75956 126 aa4.54□□□□□ -1.68
LSG1-205ENST00000461343 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
LSG1-205ENST00000461343 SACSQ9NZJ4 4579 aa4.53□□□□□ -1.68
LSG1-205ENST00000461343 CD164Q04900 197 aa4.53□□□□□ -1.68
LSG1-205ENST00000461343 LINC00846Q9NV44 126 aa4.53□□□□□ -1.68
LSG1-205ENST00000461343 J3KT08 172 aa4.52□□□□□ -1.69
LSG1-205ENST00000461343 IGFL1Q6UW32 110 aa4.52□□□□□ -1.69
LSG1-205ENST00000461343 C3orf22Q8N5N4 141 aa4.52□□□□□ -1.69
LSG1-205ENST00000461343 FAT2Q9NYQ8 4349 aa4.52□□□□□ -1.69
LSG1-205ENST00000461343 HYDINQ4G0P3 5121 aa4.51□□□□□ -1.69
LSG1-205ENST00000461343 IGLV9-49A0A0B4J1Y8 123 aa4.51□□□□□ -1.69
LSG1-205ENST00000461343 RYR2Q92736 4967 aa4.5□□□□□ -1.69
LSG1-205ENST00000461343 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
LSG1-205ENST00000461343 BPY2O14599 106 aa4.5□□□□□ -1.69
LSG1-205ENST00000461343 XGP55808 180 aa4.5□□□□□ -1.69
LSG1-205ENST00000461343 HAMPP81172 84 aa4.5□□□□□ -1.69
LSG1-205ENST00000461343 Q6ZVQ6 151 aa4.5□□□□□ -1.69
LSG1-205ENST00000461343 A0A1W2PNM2 257 aa4.49□□□□□ -1.69
LSG1-205ENST00000461343 MOBPQ13875 183 aa4.49□□□□□ -1.69
LSG1-205ENST00000461343 LIMD2Q9BT23 127 aa4.49□□□□□ -1.69
LSG1-205ENST00000461343 DNAH5Q8TE73 4624 aa4.49□□□□□ -1.69
LSG1-205ENST00000461343 MT-ATP8P03928 68 aa4.48□□□□□ -1.69
LSG1-205ENST00000461343 SPAG11AQ6PDA7 123 aa4.48□□□□□ -1.69
LSG1-205ENST00000461343 DNAH11Q96DT5 4516 aa4.48□□□□□ -1.69
LSG1-205ENST00000461343 PKD1P98161 4303 aa4.48□□□□□ -1.69
LSG1-205ENST00000461343 A0A087WSZ3 146 aa4.47□□□□□ -1.69
LSG1-205ENST00000461343 NDUFB1O75438 58 aa4.47□□□□□ -1.69
LSG1-205ENST00000461343 SMIM20Q8N5G0 67 aa4.47□□□□□ -1.69
LSG1-205ENST00000461343 KMT2CQ8NEZ4 4911 aaKnown RBP4.47□□□□□ -1.69
LSG1-205ENST00000461343 DNAH8Q96JB1 4490 aa4.46□□□□□ -1.69
LSG1-205ENST00000461343 RPS29P62273 56 aaKnown RBP4.46□□□□□ -1.7
LSG1-205ENST00000461343 HIST1H4AP62805 103 aaKnown RBP4.46□□□□□ -1.7
LSG1-205ENST00000461343 SPINK1P00995 79 aa4.45□□□□□ -1.7
LSG1-205ENST00000461343 ASB16-AS1Q495Z4 193 aa4.45□□□□□ -1.7
LSG1-205ENST00000461343 Q5XG85 94 aa4.45□□□□□ -1.7
LSG1-205ENST00000461343 TYMSOSQ8TAI1 123 aa4.45□□□□□ -1.7
LSG1-205ENST00000461343 ATOX1O00244 68 aa4.44□□□□□ -1.7
LSG1-205ENST00000461343 PKHD1P08F94 4074 aa4.44□□□□□ -1.7
LSG1-205ENST00000461343 IGKV3D-7A0A0C4DH55 119 aa4.43□□□□□ -1.7
LSG1-205ENST00000461343 SMR3BP02814 79 aaPredicted RBP4.42□□□□□ -1.7
LSG1-205ENST00000461343 A8MWP4 228 aa4.41□□□□□ -1.7
LSG1-205ENST00000461343 KRTAP1-4P0C5Y4 121 aa4.41□□□□□ -1.7
LSG1-205ENST00000461343 LRP1BQ9NZR2 4599 aa4.41□□□□□ -1.7
LSG1-205ENST00000461343 SRRM2Q9UQ35 2752 aaKnown RBP4.41□□□□□ -1.7
LSG1-205ENST00000461343 FAM236AA0A1B0GUQ0 79 aa4.4□□□□□ -1.71
LSG1-205ENST00000461343 FAM236BA0A1B0GV22 79 aa4.4□□□□□ -1.71
LSG1-205ENST00000461343 Q5VSD8 79 aa4.4□□□□□ -1.71
LSG1-205ENST00000461343 KRTAP19-1Q8IUB9 90 aa4.4□□□□□ -1.71
LSG1-205ENST00000461343 LINC00304Q8N9R0 145 aa4.4□□□□□ -1.71
LSG1-205ENST00000461343 LINC00472Q9H8W2 130 aa4.4□□□□□ -1.71
LSG1-205ENST00000461343 DYNC1H1Q14204 4646 aaKnown RBP4.39□□□□□ -1.71
LSG1-205ENST00000461343 A0A087X002 238 aa4.39□□□□□ -1.71
LSG1-205ENST00000461343 Q8N1X5 172 aa4.39□□□□□ -1.71
LSG1-205ENST00000461343 ANAPC13Q9BS18 74 aa4.39□□□□□ -1.71
LSG1-205ENST00000461343 ANAPC11Q9NYG5 84 aa4.39□□□□□ -1.71
LSG1-205ENST00000461343 VPS13BQ7Z7G8 4022 aa4.38□□□□□ -1.71
LSG1-205ENST00000461343 IGKV4-1P06312 121 aa4.38□□□□□ -1.71
LSG1-205ENST00000461343 HRCT1Q6UXD1 115 aa4.38□□□□□ -1.71
LSG1-205ENST00000461343 PRR15Q8IV56 129 aa4.38□□□□□ -1.71
LSG1-205ENST00000461343 HCG22E2RYF7 251 aa4.37□□□□□ -1.71
LSG1-205ENST00000461343 C8orf87E5RJ46 101 aa4.37□□□□□ -1.71
LSG1-205ENST00000461343 KRTAP13-2Q52LG2 175 aa4.37□□□□□ -1.71
LSG1-205ENST00000461343 KRTAP17-1Q9BYP8 105 aa4.37□□□□□ -1.71
LSG1-205ENST00000461343 PCP4P48539 62 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms