RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 MT-ATP8P03928 68 aa6.87□□□□□ -1.31
NEDD9-206ENST00000461055 DEFB105AQ8NG35 78 aa6.87□□□□□ -1.31
NEDD9-206ENST00000461055 UBL5Q9BZL1 73 aa6.87□□□□□ -1.31
NEDD9-206ENST00000461055 ATP5EP2Q5VTU8 51 aa6.86□□□□□ -1.31
NEDD9-206ENST00000461055 HERC1Q15751 4861 aa6.85□□□□□ -1.31
NEDD9-206ENST00000461055 TRBV7-7A0A0K0K1E9 115 aa6.85□□□□□ -1.31
NEDD9-206ENST00000461055 F8WEM9 126 aa6.85□□□□□ -1.31
NEDD9-206ENST00000461055 PANO1I0J062 215 aa6.85□□□□□ -1.31
NEDD9-206ENST00000461055 SPRR1BP22528 89 aa6.85□□□□□ -1.31
NEDD9-206ENST00000461055 LINC00336Q6ZUF6 198 aa6.85□□□□□ -1.31
NEDD9-206ENST00000461055 LINC00846Q9NV44 126 aa6.85□□□□□ -1.31
NEDD9-206ENST00000461055 ERC2-IT1O76042 136 aa6.84□□□□□ -1.31
NEDD9-206ENST00000461055 Q6JHZ5 121 aa6.84□□□□□ -1.31
NEDD9-206ENST00000461055 HIGD2AQ9BW72 106 aa6.84□□□□□ -1.31
NEDD9-206ENST00000461055 APOBP04114 4563 aaKnown RBP6.84□□□□□ -1.31
NEDD9-206ENST00000461055 DNAH5Q8TE73 4624 aa6.83□□□□□ -1.32
NEDD9-206ENST00000461055 A0A1B0GV72 72 aa6.83□□□□□ -1.32
NEDD9-206ENST00000461055 PRLHP81277 87 aa6.83□□□□□ -1.32
NEDD9-206ENST00000461055 LCE2AQ5TA79 106 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-206ENST00000461055 KRTAP13-1Q8IUC0 172 aa6.83□□□□□ -1.32
NEDD9-206ENST00000461055 ST20-AS1Q8NBB2 130 aa6.83□□□□□ -1.32
NEDD9-206ENST00000461055 ZNF706Q9Y5V0 76 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-206ENST00000461055 IGLV8-61A0A075B6I0 122 aa6.82□□□□□ -1.32
NEDD9-206ENST00000461055 FUSP35637 526 aaKnown RBP eCLIP6.82□□□□□ -1.32
NEDD9-206ENST00000461055 KRTAP11-1Q8IUC1 163 aa6.81□□□□□ -1.32
NEDD9-206ENST00000461055 C1orf137Q5JT78 98 aa6.8□□□□□ -1.32
NEDD9-206ENST00000461055 SMIM29Q86T20 159 aa6.8□□□□□ -1.32
NEDD9-206ENST00000461055 PCP4P48539 62 aa6.79□□□□□ -1.32
NEDD9-206ENST00000461055 KRTAP10-2P60368 255 aa6.79□□□□□ -1.32
NEDD9-206ENST00000461055 Q6ZSA8 131 aa6.79□□□□□ -1.32
NEDD9-206ENST00000461055 ZNF861PO60384 105 aa6.78□□□□□ -1.32
NEDD9-206ENST00000461055 RPL37AP61513 92 aaKnown RBP6.78□□□□□ -1.32
NEDD9-206ENST00000461055 PSORS1C2Q9UIG4 136 aa6.78□□□□□ -1.32
NEDD9-206ENST00000461055 CXCL6P80162 114 aa6.77□□□□□ -1.33
NEDD9-206ENST00000461055 Q8NBF4 154 aa6.77□□□□□ -1.33
NEDD9-206ENST00000461055 SPRR4Q96PI1 79 aa6.77□□□□□ -1.33
NEDD9-206ENST00000461055 Q6ZVQ6 151 aa6.76□□□□□ -1.33
NEDD9-206ENST00000461055 CRYGAP11844 174 aa6.75□□□□□ -1.33
NEDD9-206ENST00000461055 NREPQ16612 68 aa6.75□□□□□ -1.33
NEDD9-206ENST00000461055 LINC00483Q53H64 154 aa6.75□□□□□ -1.33
NEDD9-206ENST00000461055 C3orf22Q8N5N4 141 aa6.75□□□□□ -1.33
NEDD9-206ENST00000461055 CIRBP-AS1Q8TBR5 109 aa6.75□□□□□ -1.33
NEDD9-206ENST00000461055 FAT1Q14517 4588 aa6.75□□□□□ -1.33
NEDD9-206ENST00000461055 IGLV7-43P04211 117 aa6.74□□□□□ -1.33
NEDD9-206ENST00000461055 KRTAP10-1P60331 282 aa6.73□□□□□ -1.33
NEDD9-206ENST00000461055 A0A1W2PNM2 257 aa6.72□□□□□ -1.33
NEDD9-206ENST00000461055 HAMPP81172 84 aa6.72□□□□□ -1.33
NEDD9-206ENST00000461055 FAM30AQ9NZY2 134 aa6.72□□□□□ -1.33
NEDD9-206ENST00000461055 IGKV3D-7A0A0C4DH55 119 aa6.71□□□□□ -1.34
NEDD9-206ENST00000461055 LCE2CQ5TA81 110 aa6.71□□□□□ -1.34
NEDD9-206ENST00000461055 IGFL1Q6UW32 110 aa6.71□□□□□ -1.34
NEDD9-206ENST00000461055 SCXQ7RTU7 201 aa6.71□□□□□ -1.34
NEDD9-206ENST00000461055 FAM236AA0A1B0GUQ0 79 aa6.67□□□□□ -1.34
NEDD9-206ENST00000461055 FAM236BA0A1B0GV22 79 aa6.67□□□□□ -1.34
NEDD9-206ENST00000461055 ATOX1O00244 68 aa6.67□□□□□ -1.34
NEDD9-206ENST00000461055 BPY2O14599 106 aa6.67□□□□□ -1.34
NEDD9-206ENST00000461055 CDK2AP2O75956 126 aa6.67□□□□□ -1.34
NEDD9-206ENST00000461055 HIST1H4AP62805 103 aaKnown RBP6.67□□□□□ -1.34
NEDD9-206ENST00000461055 ANAPC13Q9BS18 74 aa6.67□□□□□ -1.34
NEDD9-206ENST00000461055 SRRM2Q9UQ35 2752 aaKnown RBP6.67□□□□□ -1.34
NEDD9-206ENST00000461055 Q8N1X5 172 aa6.66□□□□□ -1.34
NEDD9-206ENST00000461055 DNAH8Q96JB1 4490 aa6.66□□□□□ -1.34
NEDD9-206ENST00000461055 DMBT1Q9UGM3 2413 aaPredicted RBP6.66□□□□□ -1.34
NEDD9-206ENST00000461055 C4orf48Q5BLP8 95 aa6.65□□□□□ -1.34
NEDD9-206ENST00000461055 FLG2Q5D862 2391 aaPredicted RBP6.65□□□□□ -1.35
NEDD9-206ENST00000461055 C9orf153Q5TBE3 101 aa6.64□□□□□ -1.35
NEDD9-206ENST00000461055 SSBP3-AS1Q7Z2R9 100 aa6.64□□□□□ -1.35
NEDD9-206ENST00000461055 MYCBP2O75592 4640 aa6.64□□□□□ -1.35
NEDD9-206ENST00000461055 FAM229BQ4G0N7 80 aa6.63□□□□□ -1.35
NEDD9-206ENST00000461055 SMIM20Q8N5G0 67 aa6.63□□□□□ -1.35
NEDD9-206ENST00000461055 SS18L2Q9UHA2 77 aa6.63□□□□□ -1.35
NEDD9-206ENST00000461055 A0A087WSZ3 146 aa6.62□□□□□ -1.35
NEDD9-206ENST00000461055 IGLV9-49A0A0B4J1Y8 123 aa6.61□□□□□ -1.35
NEDD9-206ENST00000461055 J3KT08 172 aa6.61□□□□□ -1.35
NEDD9-206ENST00000461055 CD164Q04900 197 aa6.61□□□□□ -1.35
NEDD9-206ENST00000461055 VPS13BQ7Z7G8 4022 aa6.59□□□□□ -1.35
NEDD9-206ENST00000461055 A0A087WVE0 104 aa6.59□□□□□ -1.35
NEDD9-206ENST00000461055 MOBPQ13875 183 aa6.58□□□□□ -1.36
NEDD9-206ENST00000461055 SPINK6Q6UWN8 80 aa6.57□□□□□ -1.36
NEDD9-206ENST00000461055 UQCRQO14949 82 aa6.56□□□□□ -1.36
NEDD9-206ENST00000461055 IGKV4-1P06312 121 aa6.56□□□□□ -1.36
NEDD9-206ENST00000461055 SERP2Q8N6R1 65 aa6.56□□□□□ -1.36
NEDD9-206ENST00000461055 LINC00472Q9H8W2 130 aa6.56□□□□□ -1.36
NEDD9-206ENST00000461055 A0A0G2JQZ4 141 aa6.55□□□□□ -1.36
NEDD9-206ENST00000461055 SMR3BP02814 79 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-206ENST00000461055 COX7CP15954 63 aa6.55□□□□□ -1.36
NEDD9-206ENST00000461055 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-206ENST00000461055 DSCR10P59022 87 aa6.54□□□□□ -1.36
NEDD9-206ENST00000461055 TRAV7A0A075B6U4 112 aa6.53□□□□□ -1.36
NEDD9-206ENST00000461055 NDUFB1O75438 58 aa6.53□□□□□ -1.36
NEDD9-206ENST00000461055 ANAPC11Q9NYG5 84 aa6.53□□□□□ -1.36
NEDD9-206ENST00000461055 A8MWP4 228 aa6.52□□□□□ -1.37
NEDD9-206ENST00000461055 ASB16-AS1Q495Z4 193 aa6.52□□□□□ -1.37
NEDD9-206ENST00000461055 Q5VSD8 79 aa6.51□□□□□ -1.37
NEDD9-206ENST00000461055 Q5XG85 94 aa6.51□□□□□ -1.37
NEDD9-206ENST00000461055 UBR4Q5T4S7 5183 aa6.5□□□□□ -1.37
NEDD9-206ENST00000461055 PRR15Q8IV56 129 aa6.5□□□□□ -1.37
NEDD9-206ENST00000461055 Q8N9L7 120 aa6.5□□□□□ -1.37
NEDD9-206ENST00000461055 HCG22E2RYF7 251 aa6.49□□□□□ -1.37
NEDD9-206ENST00000461055 K7EQZ3 153 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms