RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 SPRR4Q96PI1 79 aa10.13□□□□□ -0.79
CMTM3-203ENST00000460097 FRAS1Q86XX4 4008 aa10.13□□□□□ -0.79
CMTM3-203ENST00000460097 RTL8CO15255 209 aa10.11□□□□□ -0.79
CMTM3-203ENST00000460097 C1orf195Q5TG92 126 aa10.11□□□□□ -0.79
CMTM3-203ENST00000460097 Q8NBF4 154 aa10.11□□□□□ -0.79
CMTM3-203ENST00000460097 CYP4F30PQ9H0H9 118 aa10.11□□□□□ -0.79
CMTM3-203ENST00000460097 IGLV5-37A0A075B6J1 123 aa10.1□□□□□ -0.79
CMTM3-203ENST00000460097 TLX1NBP0CAT3 122 aa10.1□□□□□ -0.79
CMTM3-203ENST00000460097 SMIM29Q86T20 159 aa10.1□□□□□ -0.79
CMTM3-203ENST00000460097 ETDCA0A1B0GVM5 59 aa10.09□□□□□ -0.79
CMTM3-203ENST00000460097 A0A1W2PNM2 257 aa10.09□□□□□ -0.79
CMTM3-203ENST00000460097 Q6ZRP5 223 aa10.09□□□□□ -0.79
CMTM3-203ENST00000460097 DNAH17Q9UFH2 4485 aa10.09□□□□□ -0.79
CMTM3-203ENST00000460097 SPRR1AP35321 89 aa10.09□□□□□ -0.79
CMTM3-203ENST00000460097 MPLKIPQ8TAP9 179 aa10.09□□□□□ -0.79
CMTM3-203ENST00000460097 PKIGQ9Y2B9 76 aa10.09□□□□□ -0.79
CMTM3-203ENST00000460097 KRTAP4-16G5E9R7 235 aaPredicted RBP10.08□□□□□ -0.8
CMTM3-203ENST00000460097 Q6ZRX8 168 aa10.08□□□□□ -0.8
CMTM3-203ENST00000460097 PRR15Q8IV56 129 aa10.08□□□□□ -0.8
CMTM3-203ENST00000460097 NKAPP1Q8N9T2 125 aa10.08□□□□□ -0.8
CMTM3-203ENST00000460097 SYCNQ0VAF6 134 aa10.06□□□□□ -0.8
CMTM3-203ENST00000460097 C7orf33Q8WU49 177 aa10.06□□□□□ -0.8
CMTM3-203ENST00000460097 FAT2Q9NYQ8 4349 aa10.06□□□□□ -0.8
CMTM3-203ENST00000460097 C1orf137Q5JT78 98 aa10.06□□□□□ -0.8
CMTM3-203ENST00000460097 NDUFB1O75438 58 aa10.05□□□□□ -0.8
CMTM3-203ENST00000460097 Q6ZRN7 208 aaPredicted RBP10.05□□□□□ -0.8
CMTM3-203ENST00000460097 FAM30AQ9NZY2 134 aa10.04□□□□□ -0.8
CMTM3-203ENST00000460097 DSCR10P59022 87 aa10.03□□□□□ -0.8
CMTM3-203ENST00000460097 V9GYY9 64 aa10.03□□□□□ -0.8
CMTM3-203ENST00000460097 C1orf64Q8NEQ6 169 aa10.03□□□□□ -0.8
CMTM3-203ENST00000460097 PSCAO43653 123 aa10.01□□□□□ -0.81
CMTM3-203ENST00000460097 IGLV1-50A0A075B6I6 118 aa10.01□□□□□ -0.81
CMTM3-203ENST00000460097 DEFB105AQ8NG35 78 aa10.01□□□□□ -0.81
CMTM3-203ENST00000460097 EPPK1P58107 5090 aaKnown RBP10□□□□□ -0.81
CMTM3-203ENST00000460097 SERTAD4-AS1Q5TG53 156 aa10□□□□□ -0.81
CMTM3-203ENST00000460097 Q9BRP9 147 aa10□□□□□ -0.81
CMTM3-203ENST00000460097 IGKV2D-24A0A075B6R9 120 aa9.99□□□□□ -0.81
CMTM3-203ENST00000460097 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.98□□□□□ -0.81
CMTM3-203ENST00000460097 HCG22E2RYF7 251 aa9.98□□□□□ -0.81
CMTM3-203ENST00000460097 PKD1P98161 4303 aa9.97□□□□□ -0.81
CMTM3-203ENST00000460097 A0A1B0GVY2 172 aa9.96□□□□□ -0.81
CMTM3-203ENST00000460097 DNAH11Q96DT5 4516 aa9.96□□□□□ -0.82
CMTM3-203ENST00000460097 H3BPC8 53 aa9.96□□□□□ -0.82
CMTM3-203ENST00000460097 K7EQZ3 153 aa9.96□□□□□ -0.82
CMTM3-203ENST00000460097 A0A087WTM6 91 aa9.95□□□□□ -0.82
CMTM3-203ENST00000460097 HECTD4Q9Y4D8 3996 aa9.95□□□□□ -0.82
CMTM3-203ENST00000460097 LRCOL1A6NCL2 159 aa9.93□□□□□ -0.82
CMTM3-203ENST00000460097 SPANXA2-OT1Q8N9U9 137 aa9.93□□□□□ -0.82
CMTM3-203ENST00000460097 IGLV8-61A0A075B6I0 122 aa9.93□□□□□ -0.82
CMTM3-203ENST00000460097 MP68P56378 58 aa9.91□□□□□ -0.82
CMTM3-203ENST00000460097 TRAV22A0A0B4J277 110 aa9.91□□□□□ -0.82
CMTM3-203ENST00000460097 ST20-AS1Q8NBB2 130 aa9.9□□□□□ -0.82
CMTM3-203ENST00000460097 SEC61GP60059 68 aa9.89□□□□□ -0.83
CMTM3-203ENST00000460097 PKHD1P08F94 4074 aa9.89□□□□□ -0.83
CMTM3-203ENST00000460097 RPL37AP8A6NKH3 93 aa9.88□□□□□ -0.83
CMTM3-203ENST00000460097 KRTAP10-2P60368 255 aa9.88□□□□□ -0.83
CMTM3-203ENST00000460097 PMAIP1Q13794 54 aa9.87□□□□□ -0.83
CMTM3-203ENST00000460097 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
CMTM3-203ENST00000460097 KRTAP29-1A8MX34 341 aaPredicted RBP9.86□□□□□ -0.83
CMTM3-203ENST00000460097 KRTAP7-1Q8IUC3 87 aa9.86□□□□□ -0.83
CMTM3-203ENST00000460097 DNAH5Q8TE73 4624 aa9.85□□□□□ -0.83
CMTM3-203ENST00000460097 C14orf177Q52M58 125 aa9.85□□□□□ -0.83
CMTM3-203ENST00000460097 DYNC1H1Q14204 4646 aaKnown RBP9.84□□□□□ -0.83
CMTM3-203ENST00000460097 BIRC6Q9NR09 4857 aa9.84□□□□□ -0.83
CMTM3-203ENST00000460097 C16orf90A8MZG2 172 aa9.84□□□□□ -0.83
CMTM3-203ENST00000460097 REG3GQ6UW15 175 aa9.83□□□□□ -0.84
CMTM3-203ENST00000460097 LIMD2Q9BT23 127 aa9.83□□□□□ -0.84
CMTM3-203ENST00000460097 UBE2BP63146 152 aa9.83□□□□□ -0.84
CMTM3-203ENST00000460097 IGFL1Q6UW32 110 aa9.83□□□□□ -0.84
CMTM3-203ENST00000460097 IGLV5-52A0A0A0MRZ9 124 aa9.82□□□□□ -0.84
CMTM3-203ENST00000460097 FAM168BA1KXE4 195 aa9.81□□□□□ -0.84
CMTM3-203ENST00000460097 LRP1BQ9NZR2 4599 aa9.8□□□□□ -0.84
CMTM3-203ENST00000460097 PSPHP1O15172 72 aa9.78□□□□□ -0.84
CMTM3-203ENST00000460097 Q5VV11 94 aa9.78□□□□□ -0.84
CMTM3-203ENST00000460097 LINC00208Q96KT6 92 aa9.76□□□□□ -0.85
CMTM3-203ENST00000460097 SPRR1BP22528 89 aa9.75□□□□□ -0.85
CMTM3-203ENST00000460097 UBE2AP49459 152 aa9.75□□□□□ -0.85
CMTM3-203ENST00000460097 C9orf163Q8N9P6 203 aa9.75□□□□□ -0.85
CMTM3-203ENST00000460097 A8MUN3 132 aa9.75□□□□□ -0.85
CMTM3-203ENST00000460097 Q8N9P0 234 aaPredicted RBP9.75□□□□□ -0.85
CMTM3-203ENST00000460097 H0Y9P7 68 aa9.74□□□□□ -0.85
CMTM3-203ENST00000460097 A0A087WSZ3 146 aa9.73□□□□□ -0.85
CMTM3-203ENST00000460097 A8MWP4 228 aa9.73□□□□□ -0.85
CMTM3-203ENST00000460097 KRTAP10-1P60331 282 aa9.73□□□□□ -0.85
CMTM3-203ENST00000460097 WFDC13Q8IUB5 93 aa9.73□□□□□ -0.85
CMTM3-203ENST00000460097 CNBPP62633 177 aaKnown RBP9.73□□□□□ -0.85
CMTM3-203ENST00000460097 CASC2Q6XLA1 102 aa9.73□□□□□ -0.85
CMTM3-203ENST00000460097 H0Y9J4 135 aa9.72□□□□□ -0.85
CMTM3-203ENST00000460097 PRR4Q16378 134 aa9.71□□□□□ -0.85
CMTM3-203ENST00000460097 LOC101927531A0A1B0GV80 90 aa9.7□□□□□ -0.86
CMTM3-203ENST00000460097 LINC00472Q9H8W2 130 aa9.7□□□□□ -0.86
CMTM3-203ENST00000460097 KIAA1109Q2LD37 5005 aa9.69□□□□□ -0.86
CMTM3-203ENST00000460097 Q75L30 129 aa9.69□□□□□ -0.86
CMTM3-203ENST00000460097 IGLV7-46A0A075B6I9 117 aa9.68□□□□□ -0.86
CMTM3-203ENST00000460097 CD164Q04900 197 aa9.68□□□□□ -0.86
CMTM3-203ENST00000460097 APOBP04114 4563 aaKnown RBP9.67□□□□□ -0.86
CMTM3-203ENST00000460097 DNAH8Q96JB1 4490 aa9.67□□□□□ -0.86
CMTM3-203ENST00000460097 RYR1P21817 5038 aa9.66□□□□□ -0.86
CMTM3-203ENST00000460097 CDK2AP2O75956 126 aa9.66□□□□□ -0.86
CMTM3-203ENST00000460097 ATP11AUNQ6ZP68 121 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms