RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 CNBPP62633 177 aaKnown RBP3.9□□□□□ -1.79
UBQLN4-202ENST00000459954 CASC10Q5T4H9 136 aa3.9□□□□□ -1.79
UBQLN4-202ENST00000459954 SMIM29Q86T20 159 aa3.9□□□□□ -1.79
UBQLN4-202ENST00000459954 ZCCHC13Q8WW36 166 aaKnown RBP3.9□□□□□ -1.79
UBQLN4-202ENST00000459954 TENM2Q9NT68 2774 aa3.9□□□□□ -1.79
UBQLN4-202ENST00000459954 C16orf90A8MZG2 172 aa3.89□□□□□ -1.79
UBQLN4-202ENST00000459954 SPRR1BP22528 89 aa3.89□□□□□ -1.79
UBQLN4-202ENST00000459954 UBE2BP63146 152 aa3.89□□□□□ -1.79
UBQLN4-202ENST00000459954 C14orf177Q52M58 125 aa3.89□□□□□ -1.79
UBQLN4-202ENST00000459954 HRCT1Q6UXD1 115 aa3.89□□□□□ -1.79
UBQLN4-202ENST00000459954 FP248Q71RG6 208 aaPredicted RBP3.89□□□□□ -1.79
UBQLN4-202ENST00000459954 Q8N9L7 120 aa3.89□□□□□ -1.79
UBQLN4-202ENST00000459954 FAM168BA1KXE4 195 aa3.88□□□□□ -1.79
UBQLN4-202ENST00000459954 H3BPC8 53 aa3.88□□□□□ -1.79
UBQLN4-202ENST00000459954 NDUFB1O75438 58 aa3.88□□□□□ -1.79
UBQLN4-202ENST00000459954 ST20-AS1Q8NBB2 130 aa3.88□□□□□ -1.79
UBQLN4-202ENST00000459954 LINC00476Q8WZB0 136 aa3.88□□□□□ -1.79
UBQLN4-202ENST00000459954 CYP4F30PQ9H0H9 118 aa3.88□□□□□ -1.79
UBQLN4-202ENST00000459954 HCG22E2RYF7 251 aa3.87□□□□□ -1.79
UBQLN4-202ENST00000459954 PMAIP1Q13794 54 aa3.87□□□□□ -1.79
UBQLN4-202ENST00000459954 HIGD2AQ9BW72 106 aa3.87□□□□□ -1.79
UBQLN4-202ENST00000459954 IGFL1Q6UW32 110 aa3.86□□□□□ -1.79
UBQLN4-202ENST00000459954 K7EQZ3 153 aa3.85□□□□□ -1.79
UBQLN4-202ENST00000459954 PSCAO43653 123 aa3.85□□□□□ -1.79
UBQLN4-202ENST00000459954 FAM30AQ9NZY2 134 aa3.85□□□□□ -1.79
UBQLN4-202ENST00000459954 A0A096LNI7 61 aa3.84□□□□□ -1.79
UBQLN4-202ENST00000459954 hDV103S1A0JD37 113 aa3.84□□□□□ -1.79
UBQLN4-202ENST00000459954 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.83□□□□□ -1.8
UBQLN4-202ENST00000459954 KRTAP29-1A8MX34 341 aaPredicted RBP3.83□□□□□ -1.8
UBQLN4-202ENST00000459954 MP68P56378 58 aa3.83□□□□□ -1.8
UBQLN4-202ENST00000459954 RPL37AP61513 92 aaKnown RBP3.83□□□□□ -1.8
UBQLN4-202ENST00000459954 Q1T7F1 81 aa3.83□□□□□ -1.8
UBQLN4-202ENST00000459954 SPANXA2-OT1Q8N9U9 137 aa3.83□□□□□ -1.8
UBQLN4-202ENST00000459954 LINC00474Q9P2X8 69 aa3.83□□□□□ -1.8
UBQLN4-202ENST00000459954 DNAH9Q9NYC9 4486 aa3.83□□□□□ -1.8
UBQLN4-202ENST00000459954 A0A1W2PNN7 141 aa3.82□□□□□ -1.8
UBQLN4-202ENST00000459954 UBE2AP49459 152 aa3.82□□□□□ -1.8
UBQLN4-202ENST00000459954 C9orf163Q8N9P6 203 aa3.82□□□□□ -1.8
UBQLN4-202ENST00000459954 APLNQ9ULZ1 77 aa3.82□□□□□ -1.8
UBQLN4-202ENST00000459954 A8MWP4 228 aa3.81□□□□□ -1.8
UBQLN4-202ENST00000459954 H3BS24 57 aa3.81□□□□□ -1.8
UBQLN4-202ENST00000459954 PRR15Q8IV56 129 aa3.81□□□□□ -1.8
UBQLN4-202ENST00000459954 LINC00472Q9H8W2 130 aa3.81□□□□□ -1.8
UBQLN4-202ENST00000459954 CSMD3Q7Z407 3707 aa3.81□□□□□ -1.8
UBQLN4-202ENST00000459954 A0A087WSZ3 146 aa3.8□□□□□ -1.8
UBQLN4-202ENST00000459954 TRAV22A0A0B4J277 110 aa3.8□□□□□ -1.8
UBQLN4-202ENST00000459954 FAM229BQ4G0N7 80 aa3.8□□□□□ -1.8
UBQLN4-202ENST00000459954 C1orf64Q8NEQ6 169 aa3.8□□□□□ -1.8
UBQLN4-202ENST00000459954 HUWE1Q7Z6Z7 4374 aaKnown RBP3.79□□□□□ -1.8
UBQLN4-202ENST00000459954 LY6G6CO95867 125 aa3.79□□□□□ -1.8
UBQLN4-202ENST00000459954 PRLHP81277 87 aa3.79□□□□□ -1.8
UBQLN4-202ENST00000459954 CASC2Q6XLA1 102 aa3.79□□□□□ -1.8
UBQLN4-202ENST00000459954 KRTAP13-1Q8IUC0 172 aa3.79□□□□□ -1.8
UBQLN4-202ENST00000459954 UBE2DNLQ8IWF7 75 aa3.79□□□□□ -1.8
UBQLN4-202ENST00000459954 DNAH7Q8WXX0 4024 aa3.79□□□□□ -1.8
UBQLN4-202ENST00000459954 IGKV2-24A0A0C4DH68 120 aa3.78□□□□□ -1.8
UBQLN4-202ENST00000459954 LRCOL1A6NCL2 159 aa3.78□□□□□ -1.8
UBQLN4-202ENST00000459954 LORP23490 312 aaPredicted RBP3.78□□□□□ -1.8
UBQLN4-202ENST00000459954 KRTAP1-5Q9BYS1 174 aa3.78□□□□□ -1.8
UBQLN4-202ENST00000459954 TP53AIP1Q9HCN2 124 aa3.78□□□□□ -1.8
UBQLN4-202ENST00000459954 DNAH1Q9P2D7 4330 aa3.78□□□□□ -1.8
UBQLN4-202ENST00000459954 H0Y9P7 68 aa3.77□□□□□ -1.81
UBQLN4-202ENST00000459954 ASB16-AS1Q495Z4 193 aa3.77□□□□□ -1.81
UBQLN4-202ENST00000459954 PHF5AQ7RTV0 110 aaKnown RBP3.77□□□□□ -1.81
UBQLN4-202ENST00000459954 WFDC13Q8IUB5 93 aa3.77□□□□□ -1.81
UBQLN4-202ENST00000459954 LINC00483Q53H64 154 aa3.76□□□□□ -1.81
UBQLN4-202ENST00000459954 MPLKIPQ8TAP9 179 aa3.76□□□□□ -1.81
UBQLN4-202ENST00000459954 LINC00208Q96KT6 92 aa3.76□□□□□ -1.81
UBQLN4-202ENST00000459954 ZNF706Q9Y5V0 76 aaPredicted RBP3.76□□□□□ -1.81
UBQLN4-202ENST00000459954 NBDYA0A0U1RRE5 68 aa3.75□□□□□ -1.81
UBQLN4-202ENST00000459954 MMP24-AS1A0A0U1RRL7 71 aa3.75□□□□□ -1.81
UBQLN4-202ENST00000459954 MOBPQ13875 183 aa3.75□□□□□ -1.81
UBQLN4-202ENST00000459954 C1orf134Q5TEV5 83 aa3.75□□□□□ -1.81
UBQLN4-202ENST00000459954 Q6ZR54 194 aa3.75□□□□□ -1.81
UBQLN4-202ENST00000459954 Q6ZRN7 208 aaPredicted RBP3.75□□□□□ -1.81
UBQLN4-202ENST00000459954 KRTAP11-1Q8IUC1 163 aa3.75□□□□□ -1.81
UBQLN4-202ENST00000459954 PRR26Q8N8Z3 221 aa3.75□□□□□ -1.81
UBQLN4-202ENST00000459954 IGLV7-46A0A075B6I9 117 aa3.74□□□□□ -1.81
UBQLN4-202ENST00000459954 A0A0G2JQZ4 141 aa3.74□□□□□ -1.81
UBQLN4-202ENST00000459954 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
UBQLN4-202ENST00000459954 LIMD2Q9BT23 127 aa3.74□□□□□ -1.81
UBQLN4-202ENST00000459954 CHTF8P0CG12 524 aa3.73□□□□□ -1.81
UBQLN4-202ENST00000459954 DEFB116Q30KQ4 102 aa3.73□□□□□ -1.81
UBQLN4-202ENST00000459954 SPACA4Q8TDM5 124 aa3.73□□□□□ -1.81
UBQLN4-202ENST00000459954 Q96NJ1 140 aa3.72□□□□□ -1.81
UBQLN4-202ENST00000459954 DYNC2H1Q8NCM8 4307 aaKnown RBP3.71□□□□□ -1.82
UBQLN4-202ENST00000459954 LYSTQ99698 3801 aa3.71□□□□□ -1.82
UBQLN4-202ENST00000459954 A0A1B0GVX0 72 aa3.7□□□□□ -1.82
UBQLN4-202ENST00000459954 Q8N9P0 234 aaPredicted RBP3.7□□□□□ -1.82
UBQLN4-202ENST00000459954 C8orf17Q9NRJ1 99 aa3.7□□□□□ -1.82
UBQLN4-202ENST00000459954 PLAC8Q9NZF1 115 aa3.7□□□□□ -1.82
UBQLN4-202ENST00000459954 STARD9Q9P2P6 4700 aa3.7□□□□□ -1.82
UBQLN4-202ENST00000459954 LOC101927531A0A1B0GV80 90 aa3.69□□□□□ -1.82
UBQLN4-202ENST00000459954 NDUFS5O43920 106 aa3.69□□□□□ -1.82
UBQLN4-202ENST00000459954 RBM12B-AS1Q9P1G2 102 aa3.69□□□□□ -1.82
UBQLN4-202ENST00000459954 KMT2CQ8NEZ4 4911 aaKnown RBP3.69□□□□□ -1.82
UBQLN4-202ENST00000459954 A0A087WTM6 91 aa3.68□□□□□ -1.82
UBQLN4-202ENST00000459954 IGLV5-52A0A0A0MRZ9 124 aa3.68□□□□□ -1.82
UBQLN4-202ENST00000459954 ZNF861PO60384 105 aa3.68□□□□□ -1.82
UBQLN4-202ENST00000459954 MRPL34Q9BQ48 92 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms