RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CHTF8P0CG12 524 aa6.61□□□□□ -1.35
USP39-210ENST00000459775 CNBPP62633 177 aaKnown RBP6.61□□□□□ -1.35
USP39-210ENST00000459775 SND1-IT1Q9HBX3 110 aa6.61□□□□□ -1.35
USP39-210ENST00000459775 TRBV30A0A0K0K1B3 111 aa6.61□□□□□ -1.35
USP39-210ENST00000459775 FAM229BQ4G0N7 80 aa6.61□□□□□ -1.35
USP39-210ENST00000459775 A0A087X002 238 aa6.6□□□□□ -1.35
USP39-210ENST00000459775 IGLV9-49A0A0B4J1Y8 123 aa6.6□□□□□ -1.35
USP39-210ENST00000459775 IGKV2-24A0A0C4DH68 120 aa6.6□□□□□ -1.35
USP39-210ENST00000459775 PANO1I0J062 215 aa6.6□□□□□ -1.35
USP39-210ENST00000459775 C14orf177Q52M58 125 aa6.6□□□□□ -1.35
USP39-210ENST00000459775 LINC00308Q8TCZ7 52 aa6.6□□□□□ -1.35
USP39-210ENST00000459775 RYR1P21817 5038 aa6.59□□□□□ -1.35
USP39-210ENST00000459775 ASB16-AS1Q495Z4 193 aa6.59□□□□□ -1.35
USP39-210ENST00000459775 A0A096LNI7 61 aa6.59□□□□□ -1.35
USP39-210ENST00000459775 FAM168BA1KXE4 195 aa6.59□□□□□ -1.35
USP39-210ENST00000459775 C9orf129Q5T035 196 aaKnown RBP6.59□□□□□ -1.35
USP39-210ENST00000459775 DNAH5Q8TE73 4624 aa6.58□□□□□ -1.36
USP39-210ENST00000459775 IGLV5-52A0A0A0MRZ9 124 aa6.58□□□□□ -1.36
USP39-210ENST00000459775 SFTA2Q6UW10 78 aa6.58□□□□□ -1.36
USP39-210ENST00000459775 C9orf163Q8N9P6 203 aa6.58□□□□□ -1.36
USP39-210ENST00000459775 F8WEM9 126 aa6.58□□□□□ -1.36
USP39-210ENST00000459775 PRO1854Q9UHT4 67 aa6.58□□□□□ -1.36
USP39-210ENST00000459775 PKHD1P08F94 4074 aa6.57□□□□□ -1.36
USP39-210ENST00000459775 COX17Q14061 63 aa6.57□□□□□ -1.36
USP39-210ENST00000459775 C16orf90A8MZG2 172 aa6.56□□□□□ -1.36
USP39-210ENST00000459775 KRTAP7-1Q8IUC3 87 aa6.56□□□□□ -1.36
USP39-210ENST00000459775 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.56□□□□□ -1.36
USP39-210ENST00000459775 A0A1B0GW54 56 aa6.55□□□□□ -1.36
USP39-210ENST00000459775 HAMPP81172 84 aa6.55□□□□□ -1.36
USP39-210ENST00000459775 NCR3O14931 201 aa6.55□□□□□ -1.36
USP39-210ENST00000459775 TLX1NBP0CAT3 122 aa6.55□□□□□ -1.36
USP39-210ENST00000459775 IGKV2-28A0A075B6P5 120 aa6.54□□□□□ -1.36
USP39-210ENST00000459775 A0A1W2PNN7 141 aa6.54□□□□□ -1.36
USP39-210ENST00000459775 IGKV2D-28P01615 120 aa6.54□□□□□ -1.36
USP39-210ENST00000459775 KRTAP10-1P60331 282 aa6.54□□□□□ -1.36
USP39-210ENST00000459775 DYNC1H1Q14204 4646 aaKnown RBP6.54□□□□□ -1.36
USP39-210ENST00000459775 CFC1BP0CG36 223 aa6.53□□□□□ -1.36
USP39-210ENST00000459775 CFC1P0CG37 223 aa6.53□□□□□ -1.36
USP39-210ENST00000459775 ATP5EP2Q5VTU8 51 aa6.53□□□□□ -1.36
USP39-210ENST00000459775 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
USP39-210ENST00000459775 ABCA13Q86UQ4 5058 aa6.53□□□□□ -1.36
USP39-210ENST00000459775 CYP4F30PQ9H0H9 118 aa6.52□□□□□ -1.37
USP39-210ENST00000459775 TRBV10-3A0A0K0K1G6 114 aa6.52□□□□□ -1.37
USP39-210ENST00000459775 H7C2G1 150 aa6.52□□□□□ -1.37
USP39-210ENST00000459775 DNAH8Q96JB1 4490 aa6.51□□□□□ -1.37
USP39-210ENST00000459775 Q8N1X5 172 aa6.51□□□□□ -1.37
USP39-210ENST00000459775 TRAV22A0A0B4J277 110 aa6.5□□□□□ -1.37
USP39-210ENST00000459775 LRP1BQ9NZR2 4599 aa6.49□□□□□ -1.37
USP39-210ENST00000459775 HCG22E2RYF7 251 aa6.49□□□□□ -1.37
USP39-210ENST00000459775 RPL37AP8A6NKH3 93 aa6.49□□□□□ -1.37
USP39-210ENST00000459775 ERC2-IT1O76042 136 aa6.49□□□□□ -1.37
USP39-210ENST00000459775 SPACA4Q8TDM5 124 aa6.49□□□□□ -1.37
USP39-210ENST00000459775 A0A087WYN8 130 aa6.48□□□□□ -1.37
USP39-210ENST00000459775 hDV103S1A0JD37 113 aa6.48□□□□□ -1.37
USP39-210ENST00000459775 KRTAP11-1Q8IUC1 163 aa6.48□□□□□ -1.37
USP39-210ENST00000459775 SPTSSBQ8NFR3 76 aa6.48□□□□□ -1.37
USP39-210ENST00000459775 C22orf24Q9Y442 160 aa6.48□□□□□ -1.37
USP39-210ENST00000459775 C7orf33Q8WU49 177 aa6.47□□□□□ -1.37
USP39-210ENST00000459775 LINC00167Q96N53 147 aa6.46□□□□□ -1.38
USP39-210ENST00000459775 COX6CP09669 75 aa6.45□□□□□ -1.38
USP39-210ENST00000459775 Q5VV11 94 aa6.45□□□□□ -1.38
USP39-210ENST00000459775 KRTAP16-1A8MUX0 517 aa6.44□□□□□ -1.38
USP39-210ENST00000459775 CIRBP-AS1Q8TBR5 109 aa6.44□□□□□ -1.38
USP39-210ENST00000459775 CDC42SE1Q9NRR8 79 aa6.44□□□□□ -1.38
USP39-210ENST00000459775 Q1RN00 199 aa6.43□□□□□ -1.38
USP39-210ENST00000459775 SMIM11BQ8TCY0 68 aa6.43□□□□□ -1.38
USP39-210ENST00000459775 RETNLBQ9BQ08 111 aa6.43□□□□□ -1.38
USP39-210ENST00000459775 IGLV6-57P01721 117 aa6.43□□□□□ -1.38
USP39-210ENST00000459775 Q6ZSA8 131 aa6.43□□□□□ -1.38
USP39-210ENST00000459775 HSPG2P98160 4391 aa6.42□□□□□ -1.38
USP39-210ENST00000459775 IGLV5-37A0A075B6J1 123 aa6.42□□□□□ -1.38
USP39-210ENST00000459775 A0A087WVE0 104 aa6.42□□□□□ -1.38
USP39-210ENST00000459775 PLAC8Q9NZF1 115 aa6.41□□□□□ -1.38
USP39-210ENST00000459775 APOBP04114 4563 aaKnown RBP6.41□□□□□ -1.38
USP39-210ENST00000459775 IGLV1-50A0A075B6I6 118 aa6.41□□□□□ -1.38
USP39-210ENST00000459775 LIMD2Q9BT23 127 aa6.4□□□□□ -1.38
USP39-210ENST00000459775 SRRM2Q9UQ35 2752 aaKnown RBP6.4□□□□□ -1.38
USP39-210ENST00000459775 A8MU10 97 aa6.4□□□□□ -1.39
USP39-210ENST00000459775 RPL28P46779 137 aaKnown RBP6.4□□□□□ -1.39
USP39-210ENST00000459775 IGKV3D-7A0A0C4DH55 119 aa6.39□□□□□ -1.39
USP39-210ENST00000459775 TRAV23DV6A0A075B6W5 121 aa6.38□□□□□ -1.39
USP39-210ENST00000459775 SMR3BP02814 79 aaPredicted RBP6.38□□□□□ -1.39
USP39-210ENST00000459775 SNURFQ9Y675 71 aa6.38□□□□□ -1.39
USP39-210ENST00000459775 CHKB-CPT1BH3BT56 60 aa6.37□□□□□ -1.39
USP39-210ENST00000459775 FAT1Q14517 4588 aa6.37□□□□□ -1.39
USP39-210ENST00000459775 MOBPQ13875 183 aa6.37□□□□□ -1.39
USP39-210ENST00000459775 KCNQ1DNQ9H478 68 aa6.37□□□□□ -1.39
USP39-210ENST00000459775 TRBV7-4A0A0J9YYF1 115 aa6.36□□□□□ -1.39
USP39-210ENST00000459775 PSORS1C2Q9UIG4 136 aa6.35□□□□□ -1.39
USP39-210ENST00000459775 PRLHP81277 87 aa6.35□□□□□ -1.39
USP39-210ENST00000459775 REG3GQ6UW15 175 aa6.35□□□□□ -1.39
USP39-210ENST00000459775 KRTAP4-16G5E9R7 235 aaPredicted RBP6.34□□□□□ -1.39
USP39-210ENST00000459775 DNAL4O96015 105 aa6.32□□□□□ -1.4
USP39-210ENST00000459775 BAALC-AS2P0C853 105 aa6.32□□□□□ -1.4
USP39-210ENST00000459775 SPRR1AP35321 89 aa6.32□□□□□ -1.4
USP39-210ENST00000459775 C1orf137Q5JT78 98 aa6.32□□□□□ -1.4
USP39-210ENST00000459775 Q9BRP9 147 aa6.32□□□□□ -1.4
USP39-210ENST00000459775 ETDCA0A1B0GVM5 59 aa6.31□□□□□ -1.4
USP39-210ENST00000459775 COX7BP24311 80 aa6.31□□□□□ -1.4
USP39-210ENST00000459775 ELOF1P60002 83 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms