RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 KRTAP1-4P0C5Y4 121 aa6.27□□□□□ -1.41
NEDD9-205ENST00000459670 ETDBQ3ZM63 59 aa6.27□□□□□ -1.41
NEDD9-205ENST00000459670 IGLV8-61A0A075B6I0 122 aa6.26□□□□□ -1.41
NEDD9-205ENST00000459670 FAT3Q8TDW7 4589 aa6.26□□□□□ -1.41
NEDD9-205ENST00000459670 TEX49A0A1B0GTD5 131 aa6.25□□□□□ -1.41
NEDD9-205ENST00000459670 SMR3BP02814 79 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-205ENST00000459670 RPL37AP61513 92 aaKnown RBP6.25□□□□□ -1.41
NEDD9-205ENST00000459670 PCLOQ9Y6V0 5065 aa6.24□□□□□ -1.41
NEDD9-205ENST00000459670 TRBV7-4A0A0J9YYF1 115 aa6.24□□□□□ -1.41
NEDD9-205ENST00000459670 SNCGO76070 127 aa6.24□□□□□ -1.41
NEDD9-205ENST00000459670 C3orf22Q8N5N4 141 aa6.24□□□□□ -1.41
NEDD9-205ENST00000459670 TNXBP22105 4242 aa6.23□□□□□ -1.41
NEDD9-205ENST00000459670 NDUFV3P56181 108 aaKnown RBP6.23□□□□□ -1.41
NEDD9-205ENST00000459670 LCE2AQ5TA79 106 aaPredicted RBP6.23□□□□□ -1.41
NEDD9-205ENST00000459670 LRP1Q07954 4544 aaKnown RBP6.22□□□□□ -1.41
NEDD9-205ENST00000459670 LOC110117498A0A087WWA1 95 aa6.21□□□□□ -1.42
NEDD9-205ENST00000459670 J3QL48 77 aa6.21□□□□□ -1.42
NEDD9-205ENST00000459670 GHRHP01286 108 aa6.21□□□□□ -1.42
NEDD9-205ENST00000459670 ZNF706Q9Y5V0 76 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-205ENST00000459670 JMJD7-PLA2G4BH0Y9G9 81 aa6.2□□□□□ -1.42
NEDD9-205ENST00000459670 SPINK6Q6UWN8 80 aa6.2□□□□□ -1.42
NEDD9-205ENST00000459670 LCE2CQ5TA81 110 aa6.19□□□□□ -1.42
NEDD9-205ENST00000459670 GAGE2AQ6NT46 116 aa6.19□□□□□ -1.42
NEDD9-205ENST00000459670 Q6ZQT0 140 aa6.19□□□□□ -1.42
NEDD9-205ENST00000459670 DEFB105AQ8NG35 78 aa6.19□□□□□ -1.42
NEDD9-205ENST00000459670 A0A087X002 238 aa6.18□□□□□ -1.42
NEDD9-205ENST00000459670 FAM229BQ4G0N7 80 aa6.18□□□□□ -1.42
NEDD9-205ENST00000459670 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
NEDD9-205ENST00000459670 Q5VSD8 79 aa6.18□□□□□ -1.42
NEDD9-205ENST00000459670 C14orf132Q9NPU4 83 aa6.18□□□□□ -1.42
NEDD9-205ENST00000459670 Q8N1X5 172 aa6.17□□□□□ -1.42
NEDD9-205ENST00000459670 ANAPC11Q9NYG5 84 aa6.17□□□□□ -1.42
NEDD9-205ENST00000459670 RBM3P98179 157 aaKnown RBP6.16□□□□□ -1.42
NEDD9-205ENST00000459670 IGFL1Q6UW32 110 aa6.16□□□□□ -1.42
NEDD9-205ENST00000459670 LAMTOR3Q9UHA4 124 aa6.16□□□□□ -1.42
NEDD9-205ENST00000459670 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
NEDD9-205ENST00000459670 A0A1W2PNM2 257 aa6.15□□□□□ -1.42
NEDD9-205ENST00000459670 A0A1B0GV72 72 aa6.14□□□□□ -1.43
NEDD9-205ENST00000459670 FAM240AA0A1B0GVK7 77 aa6.14□□□□□ -1.43
NEDD9-205ENST00000459670 CCKP06307 115 aa6.14□□□□□ -1.43
NEDD9-205ENST00000459670 Q6Q795 121 aa6.14□□□□□ -1.43
NEDD9-205ENST00000459670 PLA2G1BP04054 148 aaKnown RBP6.13□□□□□ -1.43
NEDD9-205ENST00000459670 Q8NBF4 154 aa6.13□□□□□ -1.43
NEDD9-205ENST00000459670 ABCA13Q86UQ4 5058 aa6.12□□□□□ -1.43
NEDD9-205ENST00000459670 A0A0G2JQZ4 141 aa6.12□□□□□ -1.43
NEDD9-205ENST00000459670 FAM229AH3BQW9 127 aa6.12□□□□□ -1.43
NEDD9-205ENST00000459670 PDE6GP18545 87 aa6.12□□□□□ -1.43
NEDD9-205ENST00000459670 Q6JHZ5 121 aa6.12□□□□□ -1.43
NEDD9-205ENST00000459670 KRTAP4-5Q9BYR2 181 aa6.11□□□□□ -1.43
NEDD9-205ENST00000459670 F8WEM9 126 aa6.1□□□□□ -1.43
NEDD9-205ENST00000459670 MOBPQ13875 183 aa6.1□□□□□ -1.43
NEDD9-205ENST00000459670 C21orf62-AS1Q17RA5 79 aa6.1□□□□□ -1.43
NEDD9-205ENST00000459670 DSCR8Q96T75 97 aa6.1□□□□□ -1.43
NEDD9-205ENST00000459670 K7ERU9 68 aa6.09□□□□□ -1.43
NEDD9-205ENST00000459670 CRYGAP11844 174 aa6.09□□□□□ -1.43
NEDD9-205ENST00000459670 CDIP1Q9H305 208 aa6.09□□□□□ -1.43
NEDD9-205ENST00000459670 FLG2Q5D862 2391 aaPredicted RBP6.09□□□□□ -1.43
NEDD9-205ENST00000459670 IGLV9-49A0A0B4J1Y8 123 aa6.08□□□□□ -1.44
NEDD9-205ENST00000459670 A0A1B0GW54 56 aa6.08□□□□□ -1.44
NEDD9-205ENST00000459670 SSBP3-AS1Q7Z2R9 100 aa6.08□□□□□ -1.44
NEDD9-205ENST00000459670 LINC00846Q9NV44 126 aa6.07□□□□□ -1.44
NEDD9-205ENST00000459670 TRBV7-7A0A0K0K1E9 115 aa6.06□□□□□ -1.44
NEDD9-205ENST00000459670 ACYP1P07311 99 aa6.06□□□□□ -1.44
NEDD9-205ENST00000459670 CD164Q04900 197 aa6.06□□□□□ -1.44
NEDD9-205ENST00000459670 C9orf153Q5TBE3 101 aa6.06□□□□□ -1.44
NEDD9-205ENST00000459670 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
NEDD9-205ENST00000459670 J3QR89 54 aa6.05□□□□□ -1.44
NEDD9-205ENST00000459670 KRTAP10-8P60410 259 aa6.05□□□□□ -1.44
NEDD9-205ENST00000459670 MT1HL1P0DM35 61 aa6.04□□□□□ -1.44
NEDD9-205ENST00000459670 Q5XG85 94 aa6.03□□□□□ -1.44
NEDD9-205ENST00000459670 Q96NJ1 140 aa6.03□□□□□ -1.44
NEDD9-205ENST00000459670 ASB16-AS1Q495Z4 193 aa6.01□□□□□ -1.45
NEDD9-205ENST00000459670 A0A087WSZ3 146 aa6□□□□□ -1.45
NEDD9-205ENST00000459670 LORP23490 312 aaPredicted RBP6□□□□□ -1.45
NEDD9-205ENST00000459670 RPS29P62273 56 aaKnown RBP6□□□□□ -1.45
NEDD9-205ENST00000459670 Q6ZVQ6 151 aa6□□□□□ -1.45
NEDD9-205ENST00000459670 TYMSOSQ8TAI1 123 aa6□□□□□ -1.45
NEDD9-205ENST00000459670 VPS25Q9BRG1 176 aa6□□□□□ -1.45
NEDD9-205ENST00000459670 LINC00472Q9H8W2 130 aa5.99□□□□□ -1.45
NEDD9-205ENST00000459670 C4orf48Q5BLP8 95 aa5.97□□□□□ -1.45
NEDD9-205ENST00000459670 LINC00304Q8N9R0 145 aa5.97□□□□□ -1.45
NEDD9-205ENST00000459670 LINC00643Q86TS7 51 aa5.96□□□□□ -1.46
NEDD9-205ENST00000459670 SPINK1P00995 79 aa5.95□□□□□ -1.46
NEDD9-205ENST00000459670 OXTP01178 125 aa5.95□□□□□ -1.46
NEDD9-205ENST00000459670 KRTAP29-1A8MX34 341 aaPredicted RBP5.94□□□□□ -1.46
NEDD9-205ENST00000459670 DSCR10P59022 87 aa5.94□□□□□ -1.46
NEDD9-205ENST00000459670 SPAG11AQ6PDA7 123 aa5.94□□□□□ -1.46
NEDD9-205ENST00000459670 HRCT1Q6UXD1 115 aa5.94□□□□□ -1.46
NEDD9-205ENST00000459670 UBL5Q9BZL1 73 aa5.94□□□□□ -1.46
NEDD9-205ENST00000459670 MT-ATP8P03928 68 aa5.93□□□□□ -1.46
NEDD9-205ENST00000459670 ATP5EP2Q5VTU8 51 aa5.93□□□□□ -1.46
NEDD9-205ENST00000459670 SS18L2Q9UHA2 77 aa5.93□□□□□ -1.46
NEDD9-205ENST00000459670 CXCL6P80162 114 aa5.92□□□□□ -1.46
NEDD9-205ENST00000459670 C1orf195Q5TG92 126 aa5.92□□□□□ -1.46
NEDD9-205ENST00000459670 NREPQ16612 68 aa5.91□□□□□ -1.46
NEDD9-205ENST00000459670 DMBT1Q9UGM3 2413 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-205ENST00000459670 LIMD2Q9BT23 127 aa5.9□□□□□ -1.46
NEDD9-205ENST00000459670 IGKV4-1P06312 121 aa5.89□□□□□ -1.47
NEDD9-205ENST00000459670 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
NEDD9-205ENST00000459670 IGKV3D-7A0A0C4DH55 119 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms