RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 SPANXCQ9NY87 97 aa7.03□□□□□ -1.28
SF3B4-202ENST00000457312 LINC00313P59037 77 aa7.01□□□□□ -1.29
SF3B4-202ENST00000457312 RGS21Q2M5E4 152 aa7.01□□□□□ -1.29
SF3B4-202ENST00000457312 TRAV12-1A0A0B4J245 112 aa7□□□□□ -1.29
SF3B4-202ENST00000457312 ZNF815PA8K554 130 aa7□□□□□ -1.29
SF3B4-202ENST00000457312 COLCA2A8K830 154 aa7□□□□□ -1.29
SF3B4-202ENST00000457312 SS18L2Q9UHA2 77 aa7□□□□□ -1.29
SF3B4-202ENST00000457312 LEPROTO15243 131 aa6.99□□□□□ -1.29
SF3B4-202ENST00000457312 ANKRD39Q53RE8 183 aa6.99□□□□□ -1.29
SF3B4-202ENST00000457312 LINC00518Q8N0U6 118 aa6.99□□□□□ -1.29
SF3B4-202ENST00000457312 ANAPC16Q96DE5 110 aa6.99□□□□□ -1.29
SF3B4-202ENST00000457312 TRAV13-2A0A0B4J235 113 aa6.97□□□□□ -1.29
SF3B4-202ENST00000457312 PEA15Q15121 130 aa6.97□□□□□ -1.29
SF3B4-202ENST00000457312 J3QQQ9 107 aa6.96□□□□□ -1.3
SF3B4-202ENST00000457312 MT-ND4LP03901 98 aa6.96□□□□□ -1.3
SF3B4-202ENST00000457312 FAM236AA0A1B0GUQ0 79 aa6.95□□□□□ -1.3
SF3B4-202ENST00000457312 FAM236BA0A1B0GV22 79 aa6.95□□□□□ -1.3
SF3B4-202ENST00000457312 NMUP48645 174 aa6.95□□□□□ -1.3
SF3B4-202ENST00000457312 SMCPP49901 116 aaPredicted RBP6.94□□□□□ -1.3
SF3B4-202ENST00000457312 OCIAD2Q56VL3 154 aa6.94□□□□□ -1.3
SF3B4-202ENST00000457312 SIGMAR1Q99720 223 aa6.94□□□□□ -1.3
SF3B4-202ENST00000457312 A0A0J9YXY3 114 aa6.93□□□□□ -1.3
SF3B4-202ENST00000457312 TCTE3Q8IZS6 198 aa6.93□□□□□ -1.3
SF3B4-202ENST00000457312 LINC00308Q8TCZ7 52 aa6.93□□□□□ -1.3
SF3B4-202ENST00000457312 LINC00614P0C842 121 aa6.92□□□□□ -1.3
SF3B4-202ENST00000457312 H1FX-AS1Q4G0G2 97 aa6.92□□□□□ -1.3
SF3B4-202ENST00000457312 LCE1DQ5T752 114 aa6.92□□□□□ -1.3
SF3B4-202ENST00000457312 KRTAP5-7Q6L8G8 165 aa6.91□□□□□ -1.3
SF3B4-202ENST00000457312 ZCCHC13Q8WW36 166 aaKnown RBP6.9□□□□□ -1.3
SF3B4-202ENST00000457312 NHP2Q9NX24 153 aaKnown RBP6.9□□□□□ -1.3
SF3B4-202ENST00000457312 SLC7A5P1Q8MH63 180 aa6.89□□□□□ -1.31
SF3B4-202ENST00000457312 IFI27L1Q96BM0 104 aa6.88□□□□□ -1.31
SF3B4-202ENST00000457312 A4D1N5 150 aa6.87□□□□□ -1.31
SF3B4-202ENST00000457312 LITAFQ99732 161 aa6.87□□□□□ -1.31
SF3B4-202ENST00000457312 H3BUT2 72 aa6.86□□□□□ -1.31
SF3B4-202ENST00000457312 C18orf32Q8TCD1 76 aa6.86□□□□□ -1.31
SF3B4-202ENST00000457312 A0A087WSZ3 146 aa6.84□□□□□ -1.31
SF3B4-202ENST00000457312 FABP9Q0Z7S8 132 aa6.84□□□□□ -1.31
SF3B4-202ENST00000457312 KRTAP4-8A0A0G2JLE6 195 aa6.82□□□□□ -1.32
SF3B4-202ENST00000457312 Q6ZQY7 126 aa6.82□□□□□ -1.32
SF3B4-202ENST00000457312 SEC11CQ9BY50 192 aa6.82□□□□□ -1.32
SF3B4-202ENST00000457312 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
SF3B4-202ENST00000457312 HERVK_113P61574 105 aa6.78□□□□□ -1.32
SF3B4-202ENST00000457312 IGKV4-1P06312 121 aa6.77□□□□□ -1.33
SF3B4-202ENST00000457312 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
SF3B4-202ENST00000457312 TEN1Q86WV5 123 aa6.77□□□□□ -1.33
SF3B4-202ENST00000457312 H0Y8G0 127 aa6.76□□□□□ -1.33
SF3B4-202ENST00000457312 SPRR5A0A1B0GTR4 108 aa6.75□□□□□ -1.33
SF3B4-202ENST00000457312 SERF1AO75920 110 aa6.74□□□□□ -1.33
SF3B4-202ENST00000457312 IGHV6-1A0A0B4J1U7 121 aa6.73□□□□□ -1.33
SF3B4-202ENST00000457312 TIMM17BO60830 172 aa6.73□□□□□ -1.33
SF3B4-202ENST00000457312 SCGB1D1O95968 90 aa6.73□□□□□ -1.33
SF3B4-202ENST00000457312 PLNP26678 52 aa6.73□□□□□ -1.33
SF3B4-202ENST00000457312 MT1XP80297 61 aa6.73□□□□□ -1.33
SF3B4-202ENST00000457312 COX19Q49B96 90 aa6.73□□□□□ -1.33
SF3B4-202ENST00000457312 LINC00575Q6W349 94 aa6.72□□□□□ -1.33
SF3B4-202ENST00000457312 A6NDN8 102 aa6.71□□□□□ -1.34
SF3B4-202ENST00000457312 PRO2289Q9P1D8 64 aa6.71□□□□□ -1.34
SF3B4-202ENST00000457312 SMIM11BQ8TCY0 68 aa6.7□□□□□ -1.34
SF3B4-202ENST00000457312 hADV29S1A0JD25 119 aa6.68□□□□□ -1.34
SF3B4-202ENST00000457312 KLKP1Q107X0 134 aa6.68□□□□□ -1.34
SF3B4-202ENST00000457312 C5orf47Q569G3 176 aa6.68□□□□□ -1.34
SF3B4-202ENST00000457312 C3orf79P0CE67 100 aa6.67□□□□□ -1.34
SF3B4-202ENST00000457312 MT4P47944 62 aa6.67□□□□□ -1.34
SF3B4-202ENST00000457312 SNHG12Q9BXW3 62 aa6.67□□□□□ -1.34
SF3B4-202ENST00000457312 PPDPFLQ8WWR9 84 aa6.66□□□□□ -1.34
SF3B4-202ENST00000457312 DPM2O94777 84 aa6.65□□□□□ -1.34
SF3B4-202ENST00000457312 PMCHL2Q9BQD1 86 aa6.65□□□□□ -1.34
SF3B4-202ENST00000457312 E9PLD3 99 aa6.64□□□□□ -1.35
SF3B4-202ENST00000457312 S100PP25815 95 aa6.64□□□□□ -1.35
SF3B4-202ENST00000457312 DEFB116Q30KQ4 102 aa6.63□□□□□ -1.35
SF3B4-202ENST00000457312 C8orf87E5RJ46 101 aa6.62□□□□□ -1.35
SF3B4-202ENST00000457312 IGKCP01834 107 aa6.62□□□□□ -1.35
SF3B4-202ENST00000457312 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.62□□□□□ -1.35
SF3B4-202ENST00000457312 CHCHD1Q96BP2 118 aaKnown RBP6.62□□□□□ -1.35
SF3B4-202ENST00000457312 TRAPPC1Q9Y5R8 145 aa6.59□□□□□ -1.35
SF3B4-202ENST00000457312 VAMP3Q15836 100 aa6.58□□□□□ -1.36
SF3B4-202ENST00000457312 KRTAP5-3Q6L8H2 238 aa6.57□□□□□ -1.36
SF3B4-202ENST00000457312 A0A1B0GVX0 72 aa6.56□□□□□ -1.36
SF3B4-202ENST00000457312 LINC00472Q9H8W2 130 aa6.56□□□□□ -1.36
SF3B4-202ENST00000457312 RAB37Q96AX2 223 aa6.55□□□□□ -1.36
SF3B4-202ENST00000457312 LCE4AQ5TA78 99 aa6.54□□□□□ -1.36
SF3B4-202ENST00000457312 DSCR8Q96T75 97 aa6.54□□□□□ -1.36
SF3B4-202ENST00000457312 HSPB8Q9UJY1 196 aa6.54□□□□□ -1.36
SF3B4-202ENST00000457312 IGKV3D-7A0A0C4DH55 119 aa6.52□□□□□ -1.37
SF3B4-202ENST00000457312 TTTY13Q9BZ97 58 aa6.52□□□□□ -1.37
SF3B4-202ENST00000457312 PRR15Q8IV56 129 aa6.51□□□□□ -1.37
SF3B4-202ENST00000457312 LYRM7Q5U5X0 104 aa6.5□□□□□ -1.37
SF3B4-202ENST00000457312 LCA10Q71F78 164 aa6.5□□□□□ -1.37
SF3B4-202ENST00000457312 HSBP1O75506 76 aa6.49□□□□□ -1.37
SF3B4-202ENST00000457312 LEPROTL1O95214 131 aa6.49□□□□□ -1.37
SF3B4-202ENST00000457312 NDUFV3P56181 108 aaKnown RBP6.48□□□□□ -1.37
SF3B4-202ENST00000457312 COPS9Q8WXC6 57 aa6.48□□□□□ -1.37
SF3B4-202ENST00000457312 IFITM1P13164 125 aa6.47□□□□□ -1.37
SF3B4-202ENST00000457312 CRIPTQ9P021 101 aa6.47□□□□□ -1.37
SF3B4-202ENST00000457312 RBM3P98179 157 aaKnown RBP6.45□□□□□ -1.38
SF3B4-202ENST00000457312 CSAG1Q6PB30 78 aa6.45□□□□□ -1.38
SF3B4-202ENST00000457312 MUSTN1Q8IVN3 82 aa6.44□□□□□ -1.38
SF3B4-202ENST00000457312 H3BMG7 143 aa6.42□□□□□ -1.38
SF3B4-202ENST00000457312 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms