RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 C20orf166-AS1Q96NR2 134 aa11.65□□□□□ -0.54
PTPRA-208ENST00000455631 LINC00846Q9NV44 126 aa11.65□□□□□ -0.54
PTPRA-208ENST00000455631 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
PTPRA-208ENST00000455631 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
PTPRA-208ENST00000455631 A8MUU9 505 aa11.6□□□□□ -0.55
PTPRA-208ENST00000455631 LST1O00453 97 aa11.6□□□□□ -0.55
PTPRA-208ENST00000455631 SLC7A5P1Q8MH63 180 aa11.6□□□□□ -0.55
PTPRA-208ENST00000455631 COPS9Q8WXC6 57 aa11.58□□□□□ -0.56
PTPRA-208ENST00000455631 TRAV13-2A0A0B4J235 113 aa11.57□□□□□ -0.56
PTPRA-208ENST00000455631 SYS1-DBNDD2H3BUS1 97 aa11.57□□□□□ -0.56
PTPRA-208ENST00000455631 SCGB1D4Q6XE38 83 aa11.57□□□□□ -0.56
PTPRA-208ENST00000455631 SMIM11BQ8TCY0 68 aa11.57□□□□□ -0.56
PTPRA-208ENST00000455631 KRTAP19-6Q3LI70 58 aa11.55□□□□□ -0.56
PTPRA-208ENST00000455631 Q6ZQY7 126 aa11.54□□□□□ -0.56
PTPRA-208ENST00000455631 IFITM1P13164 125 aa11.53□□□□□ -0.56
PTPRA-208ENST00000455631 OCIAD2Q56VL3 154 aa11.53□□□□□ -0.56
PTPRA-208ENST00000455631 LINC01545Q5VT33 79 aa11.51□□□□□ -0.57
PTPRA-208ENST00000455631 LINC00575Q6W349 94 aa11.5□□□□□ -0.57
PTPRA-208ENST00000455631 MUSTN1Q8IVN3 82 aa11.49□□□□□ -0.57
PTPRA-208ENST00000455631 RBM12B-AS1Q9P1G2 102 aa11.49□□□□□ -0.57
PTPRA-208ENST00000455631 VAMP3Q15836 100 aa11.48□□□□□ -0.57
PTPRA-208ENST00000455631 hADV29S1A0JD25 119 aa11.47□□□□□ -0.57
PTPRA-208ENST00000455631 KRTAP6-3Q3LI67 103 aa11.47□□□□□ -0.57
PTPRA-208ENST00000455631 Q6ZVH6 145 aa11.45□□□□□ -0.58
PTPRA-208ENST00000455631 SS18L2Q9UHA2 77 aa11.45□□□□□ -0.58
PTPRA-208ENST00000455631 KRTAP16-1A8MUX0 517 aa11.44□□□□□ -0.58
PTPRA-208ENST00000455631 H3BUT2 72 aa11.44□□□□□ -0.58
PTPRA-208ENST00000455631 DSCR10P59022 87 aa11.43□□□□□ -0.58
PTPRA-208ENST00000455631 PET117Q6UWS5 81 aa11.43□□□□□ -0.58
PTPRA-208ENST00000455631 MPLKIPQ8TAP9 179 aa11.42□□□□□ -0.58
PTPRA-208ENST00000455631 HRES1P13985 223 aa11.41□□□□□ -0.58
PTPRA-208ENST00000455631 SNHG12Q9BXW3 62 aa11.39□□□□□ -0.59
PTPRA-208ENST00000455631 SCGB1D1O95968 90 aa11.36□□□□□ -0.59
PTPRA-208ENST00000455631 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.36□□□□□ -0.59
PTPRA-208ENST00000455631 ANKRD39Q53RE8 183 aa11.35□□□□□ -0.59
PTPRA-208ENST00000455631 PPDPFLQ8WWR9 84 aa11.35□□□□□ -0.59
PTPRA-208ENST00000455631 C3orf79P0CE67 100 aa11.32□□□□□ -0.6
PTPRA-208ENST00000455631 A0A087WSZ3 146 aa11.31□□□□□ -0.6
PTPRA-208ENST00000455631 SIGMAR1Q99720 223 aa11.3□□□□□ -0.6
PTPRA-208ENST00000455631 TEN1Q86WV5 123 aa11.29□□□□□ -0.6
PTPRA-208ENST00000455631 NOTCH2NLQ7Z3S9 236 aa11.28□□□□□ -0.6
PTPRA-208ENST00000455631 COLCA2A8K830 154 aa11.27□□□□□ -0.61
PTPRA-208ENST00000455631 KRTDAPP60985 99 aa11.27□□□□□ -0.61
PTPRA-208ENST00000455631 LINC00313P59037 77 aa11.26□□□□□ -0.61
PTPRA-208ENST00000455631 NEBP20929 6669 aa11.25□□□□□ -0.61
PTPRA-208ENST00000455631 ATOH7Q8N100 152 aa11.24□□□□□ -0.61
PTPRA-208ENST00000455631 MTURNQ8N3F0 131 aa11.24□□□□□ -0.61
PTPRA-208ENST00000455631 HIST1H2BKO60814 126 aa11.23□□□□□ -0.61
PTPRA-208ENST00000455631 HIST1H2BJP06899 126 aa11.23□□□□□ -0.61
PTPRA-208ENST00000455631 HIST1H2BOP23527 126 aa11.23□□□□□ -0.61
PTPRA-208ENST00000455631 HIST1H2BBP33778 126 aa11.23□□□□□ -0.61
PTPRA-208ENST00000455631 HIST1H2BDP58876 126 aa11.23□□□□□ -0.61
PTPRA-208ENST00000455631 HIST1H2BCP62807 126 aa11.23□□□□□ -0.61
PTPRA-208ENST00000455631 HIST2H2BEQ16778 126 aa11.23□□□□□ -0.61
PTPRA-208ENST00000455631 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.23□□□□□ -0.61
PTPRA-208ENST00000455631 HIST1H2BHQ93079 126 aa11.23□□□□□ -0.61
PTPRA-208ENST00000455631 HIST1H2BNQ99877 126 aa11.23□□□□□ -0.61
PTPRA-208ENST00000455631 HIST1H2BMQ99879 126 aa11.23□□□□□ -0.61
PTPRA-208ENST00000455631 BVES-AS1Q5T3Y7 98 aa11.2□□□□□ -0.62
PTPRA-208ENST00000455631 Q8N9P0 234 aaPredicted RBP11.18□□□□□ -0.62
PTPRA-208ENST00000455631 C12orf57Q99622 126 aa11.17□□□□□ -0.62
PTPRA-208ENST00000455631 A8MWP4 228 aa11.16□□□□□ -0.62
PTPRA-208ENST00000455631 NDUFV3P56181 108 aaKnown RBP11.15□□□□□ -0.62
PTPRA-208ENST00000455631 IGKV4-1P06312 121 aa11.14□□□□□ -0.63
PTPRA-208ENST00000455631 H3BMG7 143 aa11.08□□□□□ -0.64
PTPRA-208ENST00000455631 A0A1W2PNM2 257 aa11.06□□□□□ -0.64
PTPRA-208ENST00000455631 IGHV6-1A0A0B4J1U7 121 aa11.04□□□□□ -0.64
PTPRA-208ENST00000455631 SNCGO76070 127 aa11.04□□□□□ -0.64
PTPRA-208ENST00000455631 SPINK7P58062 85 aa11.02□□□□□ -0.65
PTPRA-208ENST00000455631 SNRPEP62304 92 aaKnown RBP11.02□□□□□ -0.65
PTPRA-208ENST00000455631 DEFB116Q30KQ4 102 aa11.02□□□□□ -0.65
PTPRA-208ENST00000455631 KRTAP20-1Q3LI63 56 aa11.02□□□□□ -0.65
PTPRA-208ENST00000455631 MUC12Q9UKN1 5478 aa11.01□□□□□ -0.65
PTPRA-208ENST00000455631 FAM218AQ96MZ4 157 aa10.99□□□□□ -0.65
PTPRA-208ENST00000455631 FABP2P12104 132 aa10.98□□□□□ -0.65
PTPRA-208ENST00000455631 COA6Q5JTJ3 125 aaKnown RBP10.98□□□□□ -0.65
PTPRA-208ENST00000455631 ZCCHC13Q8WW36 166 aaKnown RBP10.97□□□□□ -0.65
PTPRA-208ENST00000455631 TRBV7-4A0A0J9YYF1 115 aa10.93□□□□□ -0.66
PTPRA-208ENST00000455631 H0YGX0 51 aa10.93□□□□□ -0.66
PTPRA-208ENST00000455631 WFDC13Q8IUB5 93 aa10.93□□□□□ -0.66
PTPRA-208ENST00000455631 HIST1H4GQ99525 98 aa10.93□□□□□ -0.66
PTPRA-208ENST00000455631 LINC00472Q9H8W2 130 aa10.93□□□□□ -0.66
PTPRA-208ENST00000455631 GHRHP01286 108 aa10.91□□□□□ -0.66
PTPRA-208ENST00000455631 HSBP1L1C9JCN9 74 aa10.9□□□□□ -0.66
PTPRA-208ENST00000455631 ANKRD29Q8N6D5 301 aa10.9□□□□□ -0.66
PTPRA-208ENST00000455631 A0A1B0GV72 72 aa10.89□□□□□ -0.67
PTPRA-208ENST00000455631 C8orf87E5RJ46 101 aa10.89□□□□□ -0.67
PTPRA-208ENST00000455631 RAB37Q96AX2 223 aa10.87□□□□□ -0.67
PTPRA-208ENST00000455631 A0A1B0GVX0 72 aa10.86□□□□□ -0.67
PTPRA-208ENST00000455631 TRACP01848 142 aa10.82□□□□□ -0.68
PTPRA-208ENST00000455631 A0A1B0GX51 115 aa10.81□□□□□ -0.68
PTPRA-208ENST00000455631 A6NN06 94 aa10.8□□□□□ -0.68
PTPRA-208ENST00000455631 CCKP06307 115 aa10.79□□□□□ -0.68
PTPRA-208ENST00000455631 A0A0B4J2C4 111 aa10.76□□□□□ -0.69
PTPRA-208ENST00000455631 LYRM7Q5U5X0 104 aa10.74□□□□□ -0.69
PTPRA-208ENST00000455631 ORMDL1Q9P0S3 153 aa10.7□□□□□ -0.7
PTPRA-208ENST00000455631 DNAL4O96015 105 aa10.69□□□□□ -0.7
PTPRA-208ENST00000455631 H1FX-AS1Q4G0G2 97 aa10.69□□□□□ -0.7
PTPRA-208ENST00000455631 COX8AP10176 69 aa10.68□□□□□ -0.7
PTPRA-208ENST00000455631 VPS25Q9BRG1 176 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms