RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 IGLV9-49A0A0B4J1Y8 123 aa8.46□□□□□ -1.05
CLK3-203ENST00000454830 CXCL6P80162 114 aa8.46□□□□□ -1.06
CLK3-203ENST00000454830 IGFL1Q6UW32 110 aa8.46□□□□□ -1.06
CLK3-203ENST00000454830 VPS13DQ5THJ4 4388 aa8.46□□□□□ -1.06
CLK3-203ENST00000454830 DEFB116Q30KQ4 102 aa8.45□□□□□ -1.06
CLK3-203ENST00000454830 A0A087WSZ3 146 aa8.45□□□□□ -1.06
CLK3-203ENST00000454830 KMT2AQ03164 3969 aa8.45□□□□□ -1.06
CLK3-203ENST00000454830 SS18L2Q9UHA2 77 aa8.44□□□□□ -1.06
CLK3-203ENST00000454830 PSORS1C2Q9UIG4 136 aa8.44□□□□□ -1.06
CLK3-203ENST00000454830 UQCRQO14949 82 aa8.43□□□□□ -1.06
CLK3-203ENST00000454830 COX7CP15954 63 aa8.43□□□□□ -1.06
CLK3-203ENST00000454830 KRTAP21-3Q3LHN1 58 aa8.43□□□□□ -1.06
CLK3-203ENST00000454830 SERP2Q8N6R1 65 aa8.42□□□□□ -1.06
CLK3-203ENST00000454830 KRTAP10-2P60368 255 aa8.41□□□□□ -1.06
CLK3-203ENST00000454830 H0Y9J4 135 aa8.41□□□□□ -1.06
CLK3-203ENST00000454830 HRCT1Q6UXD1 115 aa8.41□□□□□ -1.06
CLK3-203ENST00000454830 ANAPC11Q9NYG5 84 aa8.4□□□□□ -1.06
CLK3-203ENST00000454830 CRYGAP11844 174 aa8.38□□□□□ -1.07
CLK3-203ENST00000454830 PLAC8Q9NZF1 115 aa8.38□□□□□ -1.07
CLK3-203ENST00000454830 SPRR4Q96PI1 79 aa8.37□□□□□ -1.07
CLK3-203ENST00000454830 C20orf197Q8N268 126 aa8.36□□□□□ -1.07
CLK3-203ENST00000454830 FAM30AQ9NZY2 134 aa8.36□□□□□ -1.07
CLK3-203ENST00000454830 IGKV4-1P06312 121 aa8.35□□□□□ -1.07
CLK3-203ENST00000454830 A0A1B0GW54 56 aa8.35□□□□□ -1.07
CLK3-203ENST00000454830 CIRBP-AS1Q8TBR5 109 aa8.34□□□□□ -1.07
CLK3-203ENST00000454830 ZNF706Q9Y5V0 76 aaPredicted RBP8.34□□□□□ -1.07
CLK3-203ENST00000454830 ZNF861PO60384 105 aa8.34□□□□□ -1.08
CLK3-203ENST00000454830 KRTAP13-1Q8IUC0 172 aa8.33□□□□□ -1.08
CLK3-203ENST00000454830 MOBPQ13875 183 aa8.33□□□□□ -1.08
CLK3-203ENST00000454830 SPRR1BP22528 89 aa8.33□□□□□ -1.08
CLK3-203ENST00000454830 K7EQZ3 153 aa8.32□□□□□ -1.08
CLK3-203ENST00000454830 RPL37AP61513 92 aaKnown RBP8.32□□□□□ -1.08
CLK3-203ENST00000454830 SMIM20Q8N5G0 67 aa8.31□□□□□ -1.08
CLK3-203ENST00000454830 DNAH2Q9P225 4427 aa8.31□□□□□ -1.08
CLK3-203ENST00000454830 IGLV8-61A0A075B6I0 122 aa8.31□□□□□ -1.08
CLK3-203ENST00000454830 TRAV7A0A075B6U4 112 aa8.31□□□□□ -1.08
CLK3-203ENST00000454830 SNURFQ9Y675 71 aa8.3□□□□□ -1.08
CLK3-203ENST00000454830 WFDC13Q8IUB5 93 aa8.3□□□□□ -1.08
CLK3-203ENST00000454830 KRTAP10-1P60331 282 aa8.3□□□□□ -1.08
CLK3-203ENST00000454830 IGLV7-43P04211 117 aa8.29□□□□□ -1.08
CLK3-203ENST00000454830 DSCR10P59022 87 aa8.29□□□□□ -1.08
CLK3-203ENST00000454830 CYSTM1Q9H1C7 97 aa8.27□□□□□ -1.08
CLK3-203ENST00000454830 HECTD4Q9Y4D8 3996 aa8.25□□□□□ -1.09
CLK3-203ENST00000454830 DNAH17Q9UFH2 4485 aa8.24□□□□□ -1.09
CLK3-203ENST00000454830 HCG22E2RYF7 251 aa8.22□□□□□ -1.09
CLK3-203ENST00000454830 SPINK6Q6UWN8 80 aa8.21□□□□□ -1.09
CLK3-203ENST00000454830 NDUFB1O75438 58 aa8.2□□□□□ -1.1
CLK3-203ENST00000454830 CDK2AP2O75956 126 aa8.2□□□□□ -1.1
CLK3-203ENST00000454830 LINC00483Q53H64 154 aa8.2□□□□□ -1.1
CLK3-203ENST00000454830 DNAH11Q96DT5 4516 aa8.19□□□□□ -1.1
CLK3-203ENST00000454830 TMEM254Q8TBM7 123 aa8.17□□□□□ -1.1
CLK3-203ENST00000454830 HYDINQ4G0P3 5121 aa8.16□□□□□ -1.1
CLK3-203ENST00000454830 CASC2Q6XLA1 102 aa8.16□□□□□ -1.1
CLK3-203ENST00000454830 LINC00472Q9H8W2 130 aa8.16□□□□□ -1.1
CLK3-203ENST00000454830 DNAH6Q9C0G6 4158 aa8.16□□□□□ -1.1
CLK3-203ENST00000454830 OCR1Q9BZK8 76 aa8.16□□□□□ -1.1
CLK3-203ENST00000454830 A8MWP4 228 aa8.15□□□□□ -1.1
CLK3-203ENST00000454830 PRR15Q8IV56 129 aa8.15□□□□□ -1.11
CLK3-203ENST00000454830 IGHV6-1A0A0B4J1U7 121 aa8.14□□□□□ -1.11
CLK3-203ENST00000454830 SMR3BP02814 79 aaPredicted RBP8.14□□□□□ -1.11
CLK3-203ENST00000454830 TMEM258P61165 79 aa8.14□□□□□ -1.11
CLK3-203ENST00000454830 LCE6AA0A183 80 aa8.13□□□□□ -1.11
CLK3-203ENST00000454830 Q6ZSA8 131 aa8.13□□□□□ -1.11
CLK3-203ENST00000454830 J3KT08 172 aa8.12□□□□□ -1.11
CLK3-203ENST00000454830 FRAS1Q86XX4 4008 aa8.12□□□□□ -1.11
CLK3-203ENST00000454830 DNAH8Q96JB1 4490 aa8.12□□□□□ -1.11
CLK3-203ENST00000454830 NDUFS5O43920 106 aa8.12□□□□□ -1.11
CLK3-203ENST00000454830 ALMS1Q8TCU4 4167 aa8.11□□□□□ -1.11
CLK3-203ENST00000454830 KLKP1Q107X0 134 aa8.1□□□□□ -1.11
CLK3-203ENST00000454830 FAM236DA0A1B0GTK5 79 aa8.09□□□□□ -1.11
CLK3-203ENST00000454830 FAM236CP0DP71 79 aa8.09□□□□□ -1.11
CLK3-203ENST00000454830 DNAH5Q8TE73 4624 aa8.09□□□□□ -1.11
CLK3-203ENST00000454830 A0A087X002 238 aa8.09□□□□□ -1.11
CLK3-203ENST00000454830 H7BZZ5 65 aa8.08□□□□□ -1.12
CLK3-203ENST00000454830 LINC00336Q6ZUF6 198 aa8.08□□□□□ -1.12
CLK3-203ENST00000454830 MP68P56378 58 aa8.07□□□□□ -1.12
CLK3-203ENST00000454830 hDV103S1A0JD37 113 aa8.07□□□□□ -1.12
CLK3-203ENST00000454830 PLA2G1BP04054 148 aaKnown RBP8.07□□□□□ -1.12
CLK3-203ENST00000454830 SSBP3-AS1Q7Z2R9 100 aa8.06□□□□□ -1.12
CLK3-203ENST00000454830 C4orf48Q5BLP8 95 aa8.05□□□□□ -1.12
CLK3-203ENST00000454830 LINC00208Q96KT6 92 aa8.05□□□□□ -1.12
CLK3-203ENST00000454830 Q96NJ1 140 aa8.05□□□□□ -1.12
CLK3-203ENST00000454830 NDUFC1O43677 76 aa8.04□□□□□ -1.12
CLK3-203ENST00000454830 A0A0U1RQV1 116 aa8.03□□□□□ -1.12
CLK3-203ENST00000454830 C5orf47Q569G3 176 aa8.03□□□□□ -1.12
CLK3-203ENST00000454830 MMP24-AS1A0A0U1RRL7 71 aa8.02□□□□□ -1.13
CLK3-203ENST00000454830 A0A1B0GVX0 72 aa8.02□□□□□ -1.13
CLK3-203ENST00000454830 C8orf17Q9NRJ1 99 aa8.02□□□□□ -1.13
CLK3-203ENST00000454830 LRP1BQ9NZR2 4599 aa8.01□□□□□ -1.13
CLK3-203ENST00000454830 PRR4Q16378 134 aa8.01□□□□□ -1.13
CLK3-203ENST00000454830 H0Y9P7 68 aa8.01□□□□□ -1.13
CLK3-203ENST00000454830 KRTAP13-2Q52LG2 175 aa8.01□□□□□ -1.13
CLK3-203ENST00000454830 KRTAP29-1A8MX34 341 aaPredicted RBP8.01□□□□□ -1.13
CLK3-203ENST00000454830 TYMSOSQ8TAI1 123 aa8□□□□□ -1.13
CLK3-203ENST00000454830 FAT2Q9NYQ8 4349 aa7.99□□□□□ -1.13
CLK3-203ENST00000454830 SACSQ9NZJ4 4579 aa7.98□□□□□ -1.13
CLK3-203ENST00000454830 NOTCH2NLQ7Z3S9 236 aa7.97□□□□□ -1.13
CLK3-203ENST00000454830 CD164Q04900 197 aa7.96□□□□□ -1.14
CLK3-203ENST00000454830 FAM229BQ4G0N7 80 aa7.96□□□□□ -1.14
CLK3-203ENST00000454830 PKD1P98161 4303 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms