RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 STATHP02808 62 aa1.23□□□□□ -2.21
HMGB1P26-201ENST00000452520 SAA2P0DJI9 122 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P26-201ENST00000452520 HAMPP81172 84 aa1.23□□□□□ -2.21
HMGB1P26-201ENST00000452520 SPRR4Q96PI1 79 aa1.23□□□□□ -2.21
HMGB1P26-201ENST00000452520 KMT2CQ8NEZ4 4911 aaKnown RBP1.23□□□□□ -2.21
HMGB1P26-201ENST00000452520 EPPK1P58107 5090 aaKnown RBP1.23□□□□□ -2.21
HMGB1P26-201ENST00000452520 ZNF469Q96JG9 3925 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P26-201ENST00000452520 CUBNO60494 3623 aa1.22□□□□□ -2.21
HMGB1P26-201ENST00000452520 SSBP3-AS1Q7Z2R9 100 aa1.22□□□□□ -2.21
HMGB1P26-201ENST00000452520 A0A1B0GWA3 101 aa1.21□□□□□ -2.22
HMGB1P26-201ENST00000452520 SPINK7P58062 85 aa1.21□□□□□ -2.22
HMGB1P26-201ENST00000452520 DEFB121Q5J5C9 76 aa1.21□□□□□ -2.22
HMGB1P26-201ENST00000452520 CACNA1CQ13936 2221 aa1.21□□□□□ -2.22
HMGB1P26-201ENST00000452520 SACSQ9NZJ4 4579 aa1.2□□□□□ -2.22
HMGB1P26-201ENST00000452520 MXRA5Q9NR99 2828 aa1.2□□□□□ -2.22
HMGB1P26-201ENST00000452520 TRBV25-1A0A075B6N4 114 aa1.2□□□□□ -2.22
HMGB1P26-201ENST00000452520 ZNF815PA8K554 130 aa1.2□□□□□ -2.22
HMGB1P26-201ENST00000452520 SYS1-DBNDD2H3BUS1 97 aa1.2□□□□□ -2.22
HMGB1P26-201ENST00000452520 PMCHL1Q16048 86 aa1.2□□□□□ -2.22
HMGB1P26-201ENST00000452520 Q6JHZ5 121 aa1.2□□□□□ -2.22
HMGB1P26-201ENST00000452520 VPS13CQ709C8 3753 aa1.2□□□□□ -2.22
HMGB1P26-201ENST00000452520 USF3Q68DE3 2245 aa1.19□□□□□ -2.22
HMGB1P26-201ENST00000452520 WNK1Q9H4A3 2382 aa1.19□□□□□ -2.22
HMGB1P26-201ENST00000452520 MGAM2Q2M2H8 2515 aa1.19□□□□□ -2.22
HMGB1P26-201ENST00000452520 DEFB110Q30KQ9 67 aa1.19□□□□□ -2.22
HMGB1P26-201ENST00000452520 TMEM263Q8WUH6 116 aaKnown RBP1.19□□□□□ -2.22
HMGB1P26-201ENST00000452520 PVALEFA0A1B0GWK0 134 aa1.18□□□□□ -2.22
HMGB1P26-201ENST00000452520 C7orf77A4D0Y5 90 aa1.18□□□□□ -2.22
HMGB1P26-201ENST00000452520 GYPAP02724 150 aa1.18□□□□□ -2.22
HMGB1P26-201ENST00000452520 TFF3Q07654 80 aa1.18□□□□□ -2.22
HMGB1P26-201ENST00000452520 C9orf62Q8N4C0 152 aa1.18□□□□□ -2.22
HMGB1P26-201ENST00000452520 C20orf78Q9BR46 151 aa1.18□□□□□ -2.22
HMGB1P26-201ENST00000452520 HYDINQ4G0P3 5121 aa1.18□□□□□ -2.22
HMGB1P26-201ENST00000452520 PRKDCP78527 4128 aaKnown RBP1.18□□□□□ -2.22
HMGB1P26-201ENST00000452520 PCLOQ9Y6V0 5065 aa1.18□□□□□ -2.22
HMGB1P26-201ENST00000452520 RYR2Q92736 4967 aa1.17□□□□□ -2.22
HMGB1P26-201ENST00000452520 UQCRHLA0A096LP55 91 aa1.17□□□□□ -2.22
HMGB1P26-201ENST00000452520 ZNF720Q7Z2F6 126 aa1.17□□□□□ -2.22
HMGB1P26-201ENST00000452520 MEGF8Q7Z7M0 2845 aa1.17□□□□□ -2.22
HMGB1P26-201ENST00000452520 HERC2O95714 4834 aa1.17□□□□□ -2.22
HMGB1P26-201ENST00000452520 CMYA5Q8N3K9 4069 aa1.16□□□□□ -2.22
HMGB1P26-201ENST00000452520 PSMG4Q5JS54 123 aa1.16□□□□□ -2.22
HMGB1P26-201ENST00000452520 DEFB106AQ8N104 65 aa1.16□□□□□ -2.22
HMGB1P26-201ENST00000452520 PRO1933Q9H354 126 aa1.16□□□□□ -2.22
HMGB1P26-201ENST00000452520 ZANQ9Y493 2812 aa1.16□□□□□ -2.22
HMGB1P26-201ENST00000452520 TENM2Q9NT68 2774 aa1.16□□□□□ -2.22
HMGB1P26-201ENST00000452520 DNAJC13O75165 2243 aa1.16□□□□□ -2.22
HMGB1P26-201ENST00000452520 TRRAPQ9Y4A5 3859 aa1.15□□□□□ -2.22
HMGB1P26-201ENST00000452520 ANK2Q01484 3957 aa1.15□□□□□ -2.22
HMGB1P26-201ENST00000452520 BCE1O60756 84 aa1.15□□□□□ -2.23
HMGB1P26-201ENST00000452520 PYY3Q5JQD4 70 aa1.15□□□□□ -2.23
HMGB1P26-201ENST00000452520 C10orf113Q5VZT2 155 aa1.15□□□□□ -2.23
HMGB1P26-201ENST00000452520 NSD1Q96L73 2696 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P26-201ENST00000452520 DNAH9Q9NYC9 4486 aa1.14□□□□□ -2.23
HMGB1P26-201ENST00000452520 SVEP1Q4LDE5 3571 aa1.14□□□□□ -2.23
HMGB1P26-201ENST00000452520 SPATA8Q6RVD6 105 aa1.14□□□□□ -2.23
HMGB1P26-201ENST00000452520 LCN9Q8WX39 176 aa1.14□□□□□ -2.23
HMGB1P26-201ENST00000452520 LINC00846Q9NV44 126 aa1.14□□□□□ -2.23
HMGB1P26-201ENST00000452520 HIGD1BQ9P298 99 aa1.14□□□□□ -2.23
HMGB1P26-201ENST00000452520 ANKRD36A6QL64 1941 aa1.14□□□□□ -2.23
HMGB1P26-201ENST00000452520 A0A087WVE0 104 aa1.13□□□□□ -2.23
HMGB1P26-201ENST00000452520 LCE6AA0A183 80 aa1.13□□□□□ -2.23
HMGB1P26-201ENST00000452520 DEFB108AA8MXU0 73 aa1.13□□□□□ -2.23
HMGB1P26-201ENST00000452520 COX6A2Q02221 97 aa1.13□□□□□ -2.23
HMGB1P26-201ENST00000452520 COL7A1Q02388 2944 aa1.13□□□□□ -2.23
HMGB1P26-201ENST00000452520 UBR4Q5T4S7 5183 aa1.13□□□□□ -2.23
HMGB1P26-201ENST00000452520 VWFP04275 2813 aa1.12□□□□□ -2.23
HMGB1P26-201ENST00000452520 HERC1Q15751 4861 aa1.12□□□□□ -2.23
HMGB1P26-201ENST00000452520 HRNRQ86YZ3 2850 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P26-201ENST00000452520 DYNC2H1Q8NCM8 4307 aaKnown RBP1.12□□□□□ -2.23
HMGB1P26-201ENST00000452520 LYNX1G3V0Z9 82 aa1.12□□□□□ -2.23
HMGB1P26-201ENST00000452520 COX14Q96I36 57 aa1.12□□□□□ -2.23
HMGB1P26-201ENST00000452520 HMCN1Q96RW7 5635 aa1.12□□□□□ -2.23
HMGB1P26-201ENST00000452520 PLCE1Q9P212 2302 aa1.11□□□□□ -2.23
HMGB1P26-201ENST00000452520 S100A3P33764 101 aa1.11□□□□□ -2.23
HMGB1P26-201ENST00000452520 PLECQ15149 4684 aaKnown RBP1.1□□□□□ -2.23
HMGB1P26-201ENST00000452520 KIAA1109Q2LD37 5005 aa1.1□□□□□ -2.23
HMGB1P26-201ENST00000452520 DNAH1Q9P2D7 4330 aa1.1□□□□□ -2.23
HMGB1P26-201ENST00000452520 H0YGG7 62 aa1.1□□□□□ -2.23
HMGB1P26-201ENST00000452520 K7EP34 96 aa1.1□□□□□ -2.23
HMGB1P26-201ENST00000452520 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
HMGB1P26-201ENST00000452520 LINC01600Q96MT4 127 aa1.1□□□□□ -2.23
HMGB1P26-201ENST00000452520 ABCA13Q86UQ4 5058 aa1.1□□□□□ -2.23
HMGB1P26-201ENST00000452520 ARMS2P0C7Q2 107 aa1.09□□□□□ -2.23
HMGB1P26-201ENST00000452520 SNRPFP62306 86 aaKnown RBP1.09□□□□□ -2.23
HMGB1P26-201ENST00000452520 PSENENQ9NZ42 101 aa1.09□□□□□ -2.23
HMGB1P26-201ENST00000452520 DYNC1H1Q14204 4646 aaKnown RBP1.09□□□□□ -2.24
HMGB1P26-201ENST00000452520 TENM3Q9P273 2699 aa1.09□□□□□ -2.24
HMGB1P26-201ENST00000452520 HUWE1Q7Z6Z7 4374 aaKnown RBP1.08□□□□□ -2.24
HMGB1P26-201ENST00000452520 WNK2Q9Y3S1 2297 aa1.08□□□□□ -2.24
HMGB1P26-201ENST00000452520 F8WEM9 126 aa1.08□□□□□ -2.24
HMGB1P26-201ENST00000452520 CCL22O00626 93 aa1.08□□□□□ -2.24
HMGB1P26-201ENST00000452520 DNAH10Q8IVF4 4471 aa1.08□□□□□ -2.24
HMGB1P26-201ENST00000452520 TRBV6-1A0A0K0K1D8 114 aa1.07□□□□□ -2.24
HMGB1P26-201ENST00000452520 DEFB112Q30KQ8 113 aa1.07□□□□□ -2.24
HMGB1P26-201ENST00000452520 ETDBQ3ZM63 59 aa1.07□□□□□ -2.24
HMGB1P26-201ENST00000452520 S100A16Q96FQ6 103 aaKnown RBP1.07□□□□□ -2.24
HMGB1P26-201ENST00000452520 PLAC8Q9NZF1 115 aa1.07□□□□□ -2.24
HMGB1P26-201ENST00000452520 CYB5AP00167 134 aa1.06□□□□□ -2.24
HMGB1P26-201ENST00000452520 DEFB107AQ8IZN7 70 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms