RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 OCIAD2Q56VL3 154 aa12.88□□□□□ -0.35
C9orf3-208ENST00000451893 Q6ZRX8 168 aa12.87□□□□□ -0.35
C9orf3-208ENST00000451893 TYMSOSQ8TAI1 123 aa12.87□□□□□ -0.35
C9orf3-208ENST00000451893 ORMDL1Q9P0S3 153 aa12.87□□□□□ -0.35
C9orf3-208ENST00000451893 BAALC-AS2P0C853 105 aa12.86□□□□□ -0.35
C9orf3-208ENST00000451893 SMCPP49901 116 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-208ENST00000451893 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-208ENST00000451893 TMEM256-PLSCR3K7ERE1 68 aa12.83□□□□□ -0.36
C9orf3-208ENST00000451893 FAM19A1Q7Z5A9 133 aa12.83□□□□□ -0.36
C9orf3-208ENST00000451893 MTURNQ8N3F0 131 aa12.83□□□□□ -0.36
C9orf3-208ENST00000451893 TEN1Q86WV5 123 aa12.81□□□□□ -0.36
C9orf3-208ENST00000451893 RNF213Q63HN8 5207 aa12.8□□□□□ -0.36
C9orf3-208ENST00000451893 A0A087X002 238 aa12.8□□□□□ -0.36
C9orf3-208ENST00000451893 PRLHP81277 87 aa12.79□□□□□ -0.36
C9orf3-208ENST00000451893 ETDBQ3ZM63 59 aa12.79□□□□□ -0.36
C9orf3-208ENST00000451893 Q6ZQY7 126 aa12.78□□□□□ -0.36
C9orf3-208ENST00000451893 PPDPFLQ8WWR9 84 aa12.78□□□□□ -0.36
C9orf3-208ENST00000451893 ANAPC11Q9NYG5 84 aa12.78□□□□□ -0.36
C9orf3-208ENST00000451893 Q9BRP9 147 aa12.75□□□□□ -0.37
C9orf3-208ENST00000451893 KRTAP13-1Q8IUC0 172 aa12.74□□□□□ -0.37
C9orf3-208ENST00000451893 FAM229BQ4G0N7 80 aa12.73□□□□□ -0.37
C9orf3-208ENST00000451893 SMCR5Q8TEV8 140 aa12.71□□□□□ -0.37
C9orf3-208ENST00000451893 HIGD2AQ9BW72 106 aa12.71□□□□□ -0.37
C9orf3-208ENST00000451893 JMJD7-PLA2G4BH0Y9G9 81 aa12.7□□□□□ -0.38
C9orf3-208ENST00000451893 J3QR89 54 aa12.7□□□□□ -0.38
C9orf3-208ENST00000451893 LINC00304Q8N9R0 145 aa12.7□□□□□ -0.38
C9orf3-208ENST00000451893 LPAP08519 4548 aa12.69□□□□□ -0.38
C9orf3-208ENST00000451893 IGLV5-48A0A075B6I7 105 aa12.67□□□□□ -0.38
C9orf3-208ENST00000451893 K7ERU9 68 aa12.67□□□□□ -0.38
C9orf3-208ENST00000451893 KRTAP13-2Q52LG2 175 aa12.67□□□□□ -0.38
C9orf3-208ENST00000451893 OBSCN-AS1Q96MR7 158 aa12.67□□□□□ -0.38
C9orf3-208ENST00000451893 TEX49A0A1B0GTD5 131 aa12.65□□□□□ -0.38
C9orf3-208ENST00000451893 ERC2-IT1O76042 136 aa12.64□□□□□ -0.39
C9orf3-208ENST00000451893 ZNF706Q9Y5V0 76 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-208ENST00000451893 LAMTOR3Q9UHA4 124 aa12.63□□□□□ -0.39
C9orf3-208ENST00000451893 LINC01547P58512 204 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-208ENST00000451893 C21orf62-AS1Q17RA5 79 aa12.62□□□□□ -0.39
C9orf3-208ENST00000451893 Q8N377 158 aa12.62□□□□□ -0.39
C9orf3-208ENST00000451893 NDUFV3P56181 108 aaKnown RBP12.61□□□□□ -0.39
C9orf3-208ENST00000451893 RETNLBQ9BQ08 111 aa12.61□□□□□ -0.39
C9orf3-208ENST00000451893 RBM3P98179 157 aaKnown RBP12.6□□□□□ -0.39
C9orf3-208ENST00000451893 DEFB105AQ8NG35 78 aa12.6□□□□□ -0.39
C9orf3-208ENST00000451893 PDE6GP18545 87 aa12.59□□□□□ -0.39
C9orf3-208ENST00000451893 ST20-AS1Q8NBB2 130 aa12.59□□□□□ -0.39
C9orf3-208ENST00000451893 SPRR1BP22528 89 aa12.58□□□□□ -0.4
C9orf3-208ENST00000451893 C4orf48Q5BLP8 95 aa12.58□□□□□ -0.4
C9orf3-208ENST00000451893 C3orf22Q8N5N4 141 aa12.56□□□□□ -0.4
C9orf3-208ENST00000451893 SPRR4Q96PI1 79 aa12.56□□□□□ -0.4
C9orf3-208ENST00000451893 A0A0U1RQV1 116 aa12.55□□□□□ -0.4
C9orf3-208ENST00000451893 DSCR8Q96T75 97 aa12.54□□□□□ -0.4
C9orf3-208ENST00000451893 LOC110117498A0A087WWA1 95 aa12.53□□□□□ -0.4
C9orf3-208ENST00000451893 SPAG11AQ6PDA7 123 aa12.52□□□□□ -0.41
C9orf3-208ENST00000451893 CDIP1Q9H305 208 aa12.52□□□□□ -0.41
C9orf3-208ENST00000451893 FAM240AA0A1B0GVK7 77 aa12.51□□□□□ -0.41
C9orf3-208ENST00000451893 ACYP1P07311 99 aa12.51□□□□□ -0.41
C9orf3-208ENST00000451893 C14orf132Q9NPU4 83 aa12.51□□□□□ -0.41
C9orf3-208ENST00000451893 IGLV7-46A0A075B6I9 117 aa12.5□□□□□ -0.41
C9orf3-208ENST00000451893 F8WEM9 126 aa12.5□□□□□ -0.41
C9orf3-208ENST00000451893 SMIM29Q86T20 159 aa12.49□□□□□ -0.41
C9orf3-208ENST00000451893 TRBV7-4A0A0J9YYF1 115 aa12.48□□□□□ -0.41
C9orf3-208ENST00000451893 CCKP06307 115 aa12.48□□□□□ -0.41
C9orf3-208ENST00000451893 LINC00483Q53H64 154 aa12.48□□□□□ -0.41
C9orf3-208ENST00000451893 GAGE2AQ6NT46 116 aa12.48□□□□□ -0.41
C9orf3-208ENST00000451893 IGLV8-61A0A075B6I0 122 aa12.46□□□□□ -0.41
C9orf3-208ENST00000451893 Q6ZQT0 140 aa12.45□□□□□ -0.42
C9orf3-208ENST00000451893 Q8NBF4 154 aa12.45□□□□□ -0.42
C9orf3-208ENST00000451893 TPRXLQ17RH7 258 aa12.43□□□□□ -0.42
C9orf3-208ENST00000451893 A0A1B0GV72 72 aa12.42□□□□□ -0.42
C9orf3-208ENST00000451893 A0A1B0GW54 56 aa12.42□□□□□ -0.42
C9orf3-208ENST00000451893 IGLV9-49A0A0B4J1Y8 123 aa12.41□□□□□ -0.42
C9orf3-208ENST00000451893 Q6JHZ5 121 aa12.41□□□□□ -0.42
C9orf3-208ENST00000451893 MOBPQ13875 183 aa12.37□□□□□ -0.43
C9orf3-208ENST00000451893 SPINK1P00995 79 aa12.36□□□□□ -0.43
C9orf3-208ENST00000451893 FP248Q71RG6 208 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-208ENST00000451893 C9orf153Q5TBE3 101 aa12.34□□□□□ -0.43
C9orf3-208ENST00000451893 SSBP3-AS1Q7Z2R9 100 aa12.31□□□□□ -0.44
C9orf3-208ENST00000451893 VPS25Q9BRG1 176 aa12.31□□□□□ -0.44
C9orf3-208ENST00000451893 IGFL1Q6UW32 110 aa12.3□□□□□ -0.44
C9orf3-208ENST00000451893 MUC2Q02817 5179 aa12.28□□□□□ -0.44
C9orf3-208ENST00000451893 Q6Q795 121 aa12.28□□□□□ -0.44
C9orf3-208ENST00000451893 A0A1W2PNM2 257 aa12.26□□□□□ -0.45
C9orf3-208ENST00000451893 UBL5Q9BZL1 73 aa12.26□□□□□ -0.45
C9orf3-208ENST00000451893 LINC00846Q9NV44 126 aa12.26□□□□□ -0.45
C9orf3-208ENST00000451893 LINC00643Q86TS7 51 aa12.24□□□□□ -0.45
C9orf3-208ENST00000451893 RPS29P62273 56 aaKnown RBP12.22□□□□□ -0.45
C9orf3-208ENST00000451893 TRBV7-7A0A0K0K1E9 115 aa12.18□□□□□ -0.46
C9orf3-208ENST00000451893 KRTAP13-3Q3SY46 172 aa12.18□□□□□ -0.46
C9orf3-208ENST00000451893 SIGMAR1Q99720 223 aa12.18□□□□□ -0.46
C9orf3-208ENST00000451893 CD164Q04900 197 aa12.17□□□□□ -0.46
C9orf3-208ENST00000451893 NREPQ16612 68 aa12.16□□□□□ -0.46
C9orf3-208ENST00000451893 ATP5EP2Q5VTU8 51 aa12.15□□□□□ -0.46
C9orf3-208ENST00000451893 Q6ZVQ6 151 aa12.14□□□□□ -0.47
C9orf3-208ENST00000451893 SEC61BP60468 96 aaKnown RBP12.13□□□□□ -0.47
C9orf3-208ENST00000451893 HRCT1Q6UXD1 115 aa12.12□□□□□ -0.47
C9orf3-208ENST00000451893 LIMD2Q9BT23 127 aa12.12□□□□□ -0.47
C9orf3-208ENST00000451893 A0A0G2JQZ4 141 aa12.11□□□□□ -0.47
C9orf3-208ENST00000451893 A0A087WSZ3 146 aa12.09□□□□□ -0.47
C9orf3-208ENST00000451893 IMUPQ9GZP8 106 aa12.09□□□□□ -0.47
C9orf3-208ENST00000451893 SS18L2Q9UHA2 77 aa12.09□□□□□ -0.47
C9orf3-208ENST00000451893 MUC17Q685J3 4493 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms