RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 DEFB105AQ8NG35 78 aa11.58□□□□□ -0.56
RPS28-202ENST00000449223 KRTAP17-1Q9BYP8 105 aa11.57□□□□□ -0.56
RPS28-202ENST00000449223 GAGE2AQ6NT46 116 aa11.56□□□□□ -0.56
RPS28-202ENST00000449223 SMIM29Q86T20 159 aa11.55□□□□□ -0.56
RPS28-202ENST00000449223 BIRC6Q9NR09 4857 aa11.55□□□□□ -0.56
RPS28-202ENST00000449223 KRTAP1-4P0C5Y4 121 aa11.53□□□□□ -0.56
RPS28-202ENST00000449223 NDUFV3P56181 108 aaKnown RBP11.52□□□□□ -0.57
RPS28-202ENST00000449223 OBSCN-AS1Q96MR7 158 aa11.51□□□□□ -0.57
RPS28-202ENST00000449223 FAM229BQ4G0N7 80 aa11.5□□□□□ -0.57
RPS28-202ENST00000449223 C3orf22Q8N5N4 141 aa11.5□□□□□ -0.57
RPS28-202ENST00000449223 TEN1Q86WV5 123 aa11.5□□□□□ -0.57
RPS28-202ENST00000449223 JMJD7-PLA2G4BH0Y9G9 81 aa11.49□□□□□ -0.57
RPS28-202ENST00000449223 LAMTOR3Q9UHA4 124 aa11.49□□□□□ -0.57
RPS28-202ENST00000449223 PKHD1L1Q86WI1 4243 aa11.48□□□□□ -0.57
RPS28-202ENST00000449223 IGLV8-61A0A075B6I0 122 aa11.47□□□□□ -0.57
RPS28-202ENST00000449223 ETDBQ3ZM63 59 aa11.46□□□□□ -0.57
RPS28-202ENST00000449223 ANAPC11Q9NYG5 84 aa11.45□□□□□ -0.58
RPS28-202ENST00000449223 F8WEM9 126 aa11.44□□□□□ -0.58
RPS28-202ENST00000449223 RBM3P98179 157 aaKnown RBP11.44□□□□□ -0.58
RPS28-202ENST00000449223 A0A087X002 238 aa11.42□□□□□ -0.58
RPS28-202ENST00000449223 TRBV7-4A0A0J9YYF1 115 aa11.42□□□□□ -0.58
RPS28-202ENST00000449223 CRYGAP11844 174 aa11.4□□□□□ -0.58
RPS28-202ENST00000449223 KRTAP13-2Q52LG2 175 aa11.39□□□□□ -0.59
RPS28-202ENST00000449223 Q6JHZ5 121 aa11.39□□□□□ -0.59
RPS28-202ENST00000449223 Q8NBF4 154 aa11.39□□□□□ -0.59
RPS28-202ENST00000449223 LOC110117498A0A087WWA1 95 aa11.38□□□□□ -0.59
RPS28-202ENST00000449223 IGLV9-49A0A0B4J1Y8 123 aa11.38□□□□□ -0.59
RPS28-202ENST00000449223 HERC2O95714 4834 aa11.37□□□□□ -0.59
RPS28-202ENST00000449223 PDE6GP18545 87 aa11.37□□□□□ -0.59
RPS28-202ENST00000449223 DSCR8Q96T75 97 aa11.37□□□□□ -0.59
RPS28-202ENST00000449223 C14orf132Q9NPU4 83 aa11.36□□□□□ -0.59
RPS28-202ENST00000449223 A0A1B0GV72 72 aa11.35□□□□□ -0.59
RPS28-202ENST00000449223 MOBPQ13875 183 aa11.35□□□□□ -0.59
RPS28-202ENST00000449223 SSBP3-AS1Q7Z2R9 100 aa11.35□□□□□ -0.59
RPS28-202ENST00000449223 C21orf62-AS1Q17RA5 79 aa11.35□□□□□ -0.59
RPS28-202ENST00000449223 C9orf153Q5TBE3 101 aa11.35□□□□□ -0.59
RPS28-202ENST00000449223 IGFL1Q6UW32 110 aa11.35□□□□□ -0.59
RPS28-202ENST00000449223 Q6ZQT0 140 aa11.34□□□□□ -0.59
RPS28-202ENST00000449223 KRTAP4-5Q9BYR2 181 aa11.33□□□□□ -0.6
RPS28-202ENST00000449223 PRR26Q8N8Z3 221 aa11.31□□□□□ -0.6
RPS28-202ENST00000449223 Q6Q795 121 aa11.3□□□□□ -0.6
RPS28-202ENST00000449223 CCKP06307 115 aa11.29□□□□□ -0.6
RPS28-202ENST00000449223 LRP1Q07954 4544 aaKnown RBP11.28□□□□□ -0.6
RPS28-202ENST00000449223 TYMSOSQ8TAI1 123 aa11.28□□□□□ -0.6
RPS28-202ENST00000449223 FLG2Q5D862 2391 aaPredicted RBP11.27□□□□□ -0.61
RPS28-202ENST00000449223 A0A1W2PNM2 257 aa11.27□□□□□ -0.61
RPS28-202ENST00000449223 A0A1B0GW54 56 aa11.26□□□□□ -0.61
RPS28-202ENST00000449223 FAT3Q8TDW7 4589 aa11.26□□□□□ -0.61
RPS28-202ENST00000449223 A0A0G2JQZ4 141 aa11.25□□□□□ -0.61
RPS28-202ENST00000449223 CD164Q04900 197 aa11.25□□□□□ -0.61
RPS28-202ENST00000449223 MYCBP2O75592 4640 aa11.25□□□□□ -0.61
RPS28-202ENST00000449223 KRTAP10-8P60410 259 aa11.24□□□□□ -0.61
RPS28-202ENST00000449223 FAM240AA0A1B0GVK7 77 aa11.21□□□□□ -0.61
RPS28-202ENST00000449223 OXTP01178 125 aa11.21□□□□□ -0.61
RPS28-202ENST00000449223 J3QR89 54 aa11.19□□□□□ -0.62
RPS28-202ENST00000449223 VPS25Q9BRG1 176 aa11.19□□□□□ -0.62
RPS28-202ENST00000449223 TNXBP22105 4242 aa11.18□□□□□ -0.62
RPS28-202ENST00000449223 TRBV7-7A0A0K0K1E9 115 aa11.18□□□□□ -0.62
RPS28-202ENST00000449223 ACYP1P07311 99 aa11.17□□□□□ -0.62
RPS28-202ENST00000449223 SPAG11AQ6PDA7 123 aa11.17□□□□□ -0.62
RPS28-202ENST00000449223 ABCA13Q86UQ4 5058 aa11.16□□□□□ -0.62
RPS28-202ENST00000449223 LINC00304Q8N9R0 145 aa11.16□□□□□ -0.62
RPS28-202ENST00000449223 KRTAP29-1A8MX34 341 aaPredicted RBP11.15□□□□□ -0.62
RPS28-202ENST00000449223 K7ERU9 68 aa11.15□□□□□ -0.62
RPS28-202ENST00000449223 MT1HL1P0DM35 61 aa11.15□□□□□ -0.62
RPS28-202ENST00000449223 SPINK1P00995 79 aa11.14□□□□□ -0.63
RPS28-202ENST00000449223 RPS29P62273 56 aaKnown RBP11.14□□□□□ -0.63
RPS28-202ENST00000449223 Q5XG85 94 aa11.14□□□□□ -0.63
RPS28-202ENST00000449223 A0A087WSZ3 146 aa11.12□□□□□ -0.63
RPS28-202ENST00000449223 C4orf48Q5BLP8 95 aa11.12□□□□□ -0.63
RPS28-202ENST00000449223 HRCT1Q6UXD1 115 aa11.12□□□□□ -0.63
RPS28-202ENST00000449223 LINC00846Q9NV44 126 aa11.09□□□□□ -0.63
RPS28-202ENST00000449223 SS18L2Q9UHA2 77 aa11.09□□□□□ -0.63
RPS28-202ENST00000449223 ASB16-AS1Q495Z4 193 aa11.08□□□□□ -0.64
RPS28-202ENST00000449223 LIMD2Q9BT23 127 aa11.07□□□□□ -0.64
RPS28-202ENST00000449223 UBL5Q9BZL1 73 aa11.04□□□□□ -0.64
RPS28-202ENST00000449223 Q6ZVQ6 151 aa11.02□□□□□ -0.65
RPS28-202ENST00000449223 NREPQ16612 68 aa11.01□□□□□ -0.65
RPS28-202ENST00000449223 DMBT1Q9UGM3 2413 aaPredicted RBP11□□□□□ -0.65
RPS28-202ENST00000449223 LINC00472Q9H8W2 130 aa11□□□□□ -0.65
RPS28-202ENST00000449223 Q96NJ1 140 aa10.99□□□□□ -0.65
RPS28-202ENST00000449223 CDIP1Q9H305 208 aa10.98□□□□□ -0.65
RPS28-202ENST00000449223 C1orf195Q5TG92 126 aa10.94□□□□□ -0.66
RPS28-202ENST00000449223 LINC00643Q86TS7 51 aa10.94□□□□□ -0.66
RPS28-202ENST00000449223 PCLOQ9Y6V0 5065 aa10.91□□□□□ -0.66
RPS28-202ENST00000449223 J3KT08 172 aa10.91□□□□□ -0.66
RPS28-202ENST00000449223 J3QL48 77 aa10.91□□□□□ -0.66
RPS28-202ENST00000449223 ATP5EP2Q5VTU8 51 aa10.9□□□□□ -0.66
RPS28-202ENST00000449223 CXCL6P80162 114 aa10.89□□□□□ -0.67
RPS28-202ENST00000449223 SIGMAR1Q99720 223 aa10.89□□□□□ -0.67
RPS28-202ENST00000449223 BPY2O14599 106 aa10.89□□□□□ -0.67
RPS28-202ENST00000449223 DEFB116Q30KQ4 102 aa10.86□□□□□ -0.67
RPS28-202ENST00000449223 IGKV4-1P06312 121 aa10.85□□□□□ -0.67
RPS28-202ENST00000449223 DSCR10P59022 87 aa10.85□□□□□ -0.67
RPS28-202ENST00000449223 A8MWP4 228 aa10.82□□□□□ -0.68
RPS28-202ENST00000449223 FP248Q71RG6 208 aaPredicted RBP10.81□□□□□ -0.68
RPS28-202ENST00000449223 RETNLBQ9BQ08 111 aa10.8□□□□□ -0.68
RPS28-202ENST00000449223 IGKV3D-7A0A0C4DH55 119 aa10.79□□□□□ -0.68
RPS28-202ENST00000449223 K7EQZ3 153 aa10.77□□□□□ -0.69
RPS28-202ENST00000449223 NDUFB1O75438 58 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms