RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 SPRR1BP22528 89 aa6.54□□□□□ -1.36
VIPAS39-203ENST00000448935 RYR3Q15413 4870 aa6.54□□□□□ -1.36
VIPAS39-203ENST00000448935 C1orf137Q5JT78 98 aa6.54□□□□□ -1.36
VIPAS39-203ENST00000448935 C3orf22Q8N5N4 141 aa6.54□□□□□ -1.36
VIPAS39-203ENST00000448935 KRTAP13-1Q8IUC0 172 aa6.53□□□□□ -1.36
VIPAS39-203ENST00000448935 Q6ZVQ6 151 aa6.52□□□□□ -1.37
VIPAS39-203ENST00000448935 SMIM29Q86T20 159 aa6.52□□□□□ -1.37
VIPAS39-203ENST00000448935 IGLV8-61A0A075B6I0 122 aa6.51□□□□□ -1.37
VIPAS39-203ENST00000448935 ZNF706Q9Y5V0 76 aaPredicted RBP6.51□□□□□ -1.37
VIPAS39-203ENST00000448935 ALMS1Q8TCU4 4167 aa6.51□□□□□ -1.37
VIPAS39-203ENST00000448935 DNAH6Q9C0G6 4158 aa6.51□□□□□ -1.37
VIPAS39-203ENST00000448935 IGKV3D-7A0A0C4DH55 119 aa6.5□□□□□ -1.37
VIPAS39-203ENST00000448935 KRTAP10-2P60368 255 aa6.5□□□□□ -1.37
VIPAS39-203ENST00000448935 Q8NBF4 154 aa6.5□□□□□ -1.37
VIPAS39-203ENST00000448935 PSORS1C2Q9UIG4 136 aa6.5□□□□□ -1.37
VIPAS39-203ENST00000448935 CXCL6P80162 114 aa6.5□□□□□ -1.37
VIPAS39-203ENST00000448935 LCE6AA0A183 80 aa6.49□□□□□ -1.37
VIPAS39-203ENST00000448935 HAMPP81172 84 aa6.49□□□□□ -1.37
VIPAS39-203ENST00000448935 LINC00336Q6ZUF6 198 aa6.49□□□□□ -1.37
VIPAS39-203ENST00000448935 SPRR4Q96PI1 79 aa6.49□□□□□ -1.37
VIPAS39-203ENST00000448935 NREPQ16612 68 aa6.48□□□□□ -1.37
VIPAS39-203ENST00000448935 ANAPC13Q9BS18 74 aa6.48□□□□□ -1.37
VIPAS39-203ENST00000448935 KMT2AQ03164 3969 aa6.48□□□□□ -1.37
VIPAS39-203ENST00000448935 A0A1W2PNM2 257 aa6.47□□□□□ -1.37
VIPAS39-203ENST00000448935 ZNF861PO60384 105 aa6.47□□□□□ -1.37
VIPAS39-203ENST00000448935 Q6ZSA8 131 aa6.47□□□□□ -1.37
VIPAS39-203ENST00000448935 DNAH17Q9UFH2 4485 aa6.47□□□□□ -1.37
VIPAS39-203ENST00000448935 FAM236AA0A1B0GUQ0 79 aa6.47□□□□□ -1.37
VIPAS39-203ENST00000448935 FAM236BA0A1B0GV22 79 aa6.47□□□□□ -1.37
VIPAS39-203ENST00000448935 CRYGAP11844 174 aa6.47□□□□□ -1.37
VIPAS39-203ENST00000448935 HIST1H4AP62805 103 aaKnown RBP6.47□□□□□ -1.37
VIPAS39-203ENST00000448935 DNAH2Q9P225 4427 aa6.46□□□□□ -1.37
VIPAS39-203ENST00000448935 IGFL1Q6UW32 110 aa6.46□□□□□ -1.38
VIPAS39-203ENST00000448935 CIRBP-AS1Q8TBR5 109 aa6.46□□□□□ -1.38
VIPAS39-203ENST00000448935 IGLV7-43P04211 117 aa6.44□□□□□ -1.38
VIPAS39-203ENST00000448935 RPL37AP61513 92 aaKnown RBP6.44□□□□□ -1.38
VIPAS39-203ENST00000448935 LINC00483Q53H64 154 aa6.44□□□□□ -1.38
VIPAS39-203ENST00000448935 ATOX1O00244 68 aa6.43□□□□□ -1.38
VIPAS39-203ENST00000448935 KRTAP10-1P60331 282 aa6.43□□□□□ -1.38
VIPAS39-203ENST00000448935 SCXQ7RTU7 201 aa6.43□□□□□ -1.38
VIPAS39-203ENST00000448935 KRTAP17-1Q9BYP8 105 aa6.43□□□□□ -1.38
VIPAS39-203ENST00000448935 BPY2O14599 106 aa6.43□□□□□ -1.38
VIPAS39-203ENST00000448935 SEC61BP60468 96 aaKnown RBP6.41□□□□□ -1.38
VIPAS39-203ENST00000448935 A0A087WVE0 104 aa6.4□□□□□ -1.38
VIPAS39-203ENST00000448935 C9orf153Q5TBE3 101 aa6.39□□□□□ -1.39
VIPAS39-203ENST00000448935 HECTD4Q9Y4D8 3996 aa6.38□□□□□ -1.39
VIPAS39-203ENST00000448935 IGLV9-49A0A0B4J1Y8 123 aa6.38□□□□□ -1.39
VIPAS39-203ENST00000448935 A0A087WSZ3 146 aa6.37□□□□□ -1.39
VIPAS39-203ENST00000448935 Q75L30 129 aa6.36□□□□□ -1.39
VIPAS39-203ENST00000448935 A0A0G2JQZ4 141 aa6.36□□□□□ -1.39
VIPAS39-203ENST00000448935 FRAS1Q86XX4 4008 aa6.35□□□□□ -1.39
VIPAS39-203ENST00000448935 SMIM20Q8N5G0 67 aa6.35□□□□□ -1.39
VIPAS39-203ENST00000448935 EPPK1P58107 5090 aaKnown RBP6.35□□□□□ -1.39
VIPAS39-203ENST00000448935 IGKV4-1P06312 121 aa6.34□□□□□ -1.39
VIPAS39-203ENST00000448935 BIRC6Q9NR09 4857 aa6.33□□□□□ -1.4
VIPAS39-203ENST00000448935 UQCRQO14949 82 aa6.33□□□□□ -1.4
VIPAS39-203ENST00000448935 MOBPQ13875 183 aa6.33□□□□□ -1.4
VIPAS39-203ENST00000448935 SERP2Q8N6R1 65 aa6.33□□□□□ -1.4
VIPAS39-203ENST00000448935 SS18L2Q9UHA2 77 aa6.33□□□□□ -1.4
VIPAS39-203ENST00000448935 A0A1B0GVY2 172 aa6.32□□□□□ -1.4
VIPAS39-203ENST00000448935 COX7CP15954 63 aa6.32□□□□□ -1.4
VIPAS39-203ENST00000448935 MPLKIPQ8TAP9 179 aa6.32□□□□□ -1.4
VIPAS39-203ENST00000448935 HYDINQ4G0P3 5121 aa6.32□□□□□ -1.4
VIPAS39-203ENST00000448935 J3KT08 172 aa6.32□□□□□ -1.4
VIPAS39-203ENST00000448935 SSBP3-AS1Q7Z2R9 100 aa6.32□□□□□ -1.4
VIPAS39-203ENST00000448935 DNAH11Q96DT5 4516 aa6.31□□□□□ -1.4
VIPAS39-203ENST00000448935 DNAH8Q96JB1 4490 aa6.31□□□□□ -1.4
VIPAS39-203ENST00000448935 FAM229BQ4G0N7 80 aa6.31□□□□□ -1.4
VIPAS39-203ENST00000448935 DSCR10P59022 87 aa6.3□□□□□ -1.4
VIPAS39-203ENST00000448935 Q8N9L7 120 aa6.3□□□□□ -1.4
VIPAS39-203ENST00000448935 DNAH5Q8TE73 4624 aa6.29□□□□□ -1.4
VIPAS39-203ENST00000448935 CD164Q04900 197 aa6.29□□□□□ -1.4
VIPAS39-203ENST00000448935 ANAPC11Q9NYG5 84 aa6.29□□□□□ -1.4
VIPAS39-203ENST00000448935 FAT2Q9NYQ8 4349 aa6.29□□□□□ -1.4
VIPAS39-203ENST00000448935 PKD1P98161 4303 aa6.29□□□□□ -1.4
VIPAS39-203ENST00000448935 TRAV7A0A075B6U4 112 aa6.28□□□□□ -1.4
VIPAS39-203ENST00000448935 CCDC179H3BU77 68 aa6.28□□□□□ -1.4
VIPAS39-203ENST00000448935 LINC00472Q9H8W2 130 aa6.28□□□□□ -1.4
VIPAS39-203ENST00000448935 XP32Q5T750 250 aa6.28□□□□□ -1.4
VIPAS39-203ENST00000448935 K7EQZ3 153 aa6.27□□□□□ -1.41
VIPAS39-203ENST00000448935 SACSQ9NZJ4 4579 aa6.27□□□□□ -1.41
VIPAS39-203ENST00000448935 RYR2Q92736 4967 aa6.26□□□□□ -1.41
VIPAS39-203ENST00000448935 SRRM2Q9UQ35 2752 aaKnown RBP6.26□□□□□ -1.41
VIPAS39-203ENST00000448935 A8MWP4 228 aa6.25□□□□□ -1.41
VIPAS39-203ENST00000448935 NDUFB1O75438 58 aa6.25□□□□□ -1.41
VIPAS39-203ENST00000448935 SPINK6Q6UWN8 80 aa6.25□□□□□ -1.41
VIPAS39-203ENST00000448935 HRCT1Q6UXD1 115 aa6.25□□□□□ -1.41
VIPAS39-203ENST00000448935 DEFB116Q30KQ4 102 aa6.25□□□□□ -1.41
VIPAS39-203ENST00000448935 HCG22E2RYF7 251 aa6.24□□□□□ -1.41
VIPAS39-203ENST00000448935 PRR15Q8IV56 129 aa6.24□□□□□ -1.41
VIPAS39-203ENST00000448935 CDK2AP2O75956 126 aa6.21□□□□□ -1.41
VIPAS39-203ENST00000448935 A0A087X002 238 aa6.21□□□□□ -1.42
VIPAS39-203ENST00000448935 KRTAP1-4P0C5Y4 121 aa6.21□□□□□ -1.42
VIPAS39-203ENST00000448935 ASB16-AS1Q495Z4 193 aa6.21□□□□□ -1.42
VIPAS39-203ENST00000448935 Q96NJ1 140 aa6.21□□□□□ -1.42
VIPAS39-203ENST00000448935 KRTAP13-2Q52LG2 175 aa6.2□□□□□ -1.42
VIPAS39-203ENST00000448935 OCR1Q9BZK8 76 aa6.2□□□□□ -1.42
VIPAS39-203ENST00000448935 Q5XG85 94 aa6.18□□□□□ -1.42
VIPAS39-203ENST00000448935 Q8N1X5 172 aa6.18□□□□□ -1.42
VIPAS39-203ENST00000448935 PRR26Q8N8Z3 221 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms