RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 NDUFC1O43677 76 aa5.93□□□□□ -1.46
KLHL3-202ENST00000447439 DSCR10P59022 87 aa5.93□□□□□ -1.46
KLHL3-202ENST00000447439 IGFL1Q6UW32 110 aa5.92□□□□□ -1.46
KLHL3-202ENST00000447439 KRTAP3-3Q9BYR6 98 aa5.92□□□□□ -1.46
KLHL3-202ENST00000447439 KRTAP3-2Q9BYR7 98 aa5.92□□□□□ -1.46
KLHL3-202ENST00000447439 C16orf90A8MZG2 172 aa5.92□□□□□ -1.46
KLHL3-202ENST00000447439 EPM2AB3EWF7 344 aa5.91□□□□□ -1.46
KLHL3-202ENST00000447439 PANO1I0J062 215 aa5.91□□□□□ -1.46
KLHL3-202ENST00000447439 RPL37AP61513 92 aaKnown RBP5.91□□□□□ -1.46
KLHL3-202ENST00000447439 SERP1Q9Y6X1 66 aa5.91□□□□□ -1.46
KLHL3-202ENST00000447439 A0A087WSZ3 146 aa5.9□□□□□ -1.46
KLHL3-202ENST00000447439 SPRR4Q96PI1 79 aa5.9□□□□□ -1.46
KLHL3-202ENST00000447439 MDFIQ99750 246 aa5.9□□□□□ -1.46
KLHL3-202ENST00000447439 APLNQ9ULZ1 77 aa5.9□□□□□ -1.46
KLHL3-202ENST00000447439 ATP5EP56381 51 aaPredicted RBP5.9□□□□□ -1.47
KLHL3-202ENST00000447439 PLECQ15149 4684 aaKnown RBP5.89□□□□□ -1.47
KLHL3-202ENST00000447439 LINC00474Q9P2X8 69 aa5.89□□□□□ -1.47
KLHL3-202ENST00000447439 A0A0U1RQV1 116 aa5.89□□□□□ -1.47
KLHL3-202ENST00000447439 UBE2AP49459 152 aa5.88□□□□□ -1.47
KLHL3-202ENST00000447439 CNBPP62633 177 aaKnown RBP5.88□□□□□ -1.47
KLHL3-202ENST00000447439 WFDC13Q8IUB5 93 aa5.88□□□□□ -1.47
KLHL3-202ENST00000447439 FAM229BQ4G0N7 80 aa5.87□□□□□ -1.47
KLHL3-202ENST00000447439 PKIGQ9Y2B9 76 aa5.86□□□□□ -1.47
KLHL3-202ENST00000447439 FP248Q71RG6 208 aaPredicted RBP5.85□□□□□ -1.47
KLHL3-202ENST00000447439 PRR4Q16378 134 aa5.85□□□□□ -1.47
KLHL3-202ENST00000447439 LINC00336Q6ZUF6 198 aa5.84□□□□□ -1.47
KLHL3-202ENST00000447439 PRO0628Q9UI54 55 aa5.84□□□□□ -1.47
KLHL3-202ENST00000447439 LRCOL1A6NCL2 159 aa5.84□□□□□ -1.47
KLHL3-202ENST00000447439 KRTAP21-3Q3LHN1 58 aa5.84□□□□□ -1.47
KLHL3-202ENST00000447439 HCG22E2RYF7 251 aa5.83□□□□□ -1.48
KLHL3-202ENST00000447439 STARD9Q9P2P6 4700 aa5.83□□□□□ -1.48
KLHL3-202ENST00000447439 MPLKIPQ8TAP9 179 aa5.82□□□□□ -1.48
KLHL3-202ENST00000447439 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.82□□□□□ -1.48
KLHL3-202ENST00000447439 IGLV8-61A0A075B6I0 122 aa5.82□□□□□ -1.48
KLHL3-202ENST00000447439 NBDYA0A0U1RRE5 68 aa5.82□□□□□ -1.48
KLHL3-202ENST00000447439 LCE6AA0A183 80 aa5.82□□□□□ -1.48
KLHL3-202ENST00000447439 C9orf163Q8N9P6 203 aa5.82□□□□□ -1.48
KLHL3-202ENST00000447439 C14orf177Q52M58 125 aa5.81□□□□□ -1.48
KLHL3-202ENST00000447439 SMIM26A0A096LP01 95 aa5.8□□□□□ -1.48
KLHL3-202ENST00000447439 IGLV9-49A0A0B4J1Y8 123 aa5.8□□□□□ -1.48
KLHL3-202ENST00000447439 Q6ZRN7 208 aaPredicted RBP5.79□□□□□ -1.48
KLHL3-202ENST00000447439 DYNC2H1Q8NCM8 4307 aaKnown RBP5.79□□□□□ -1.48
KLHL3-202ENST00000447439 B9D2Q9BPU9 175 aa5.79□□□□□ -1.48
KLHL3-202ENST00000447439 ANAPC11Q9NYG5 84 aa5.79□□□□□ -1.48
KLHL3-202ENST00000447439 V9GYY9 64 aa5.79□□□□□ -1.48
KLHL3-202ENST00000447439 H0Y9J4 135 aa5.78□□□□□ -1.48
KLHL3-202ENST00000447439 FRAS1Q86XX4 4008 aa5.78□□□□□ -1.48
KLHL3-202ENST00000447439 SPRR1BP22528 89 aa5.77□□□□□ -1.49
KLHL3-202ENST00000447439 PRKDCP78527 4128 aaKnown RBP5.77□□□□□ -1.49
KLHL3-202ENST00000447439 KMT2AQ03164 3969 aa5.77□□□□□ -1.49
KLHL3-202ENST00000447439 ZCCHC13Q8WW36 166 aaKnown RBP5.76□□□□□ -1.49
KLHL3-202ENST00000447439 CASC2Q6XLA1 102 aa5.75□□□□□ -1.49
KLHL3-202ENST00000447439 LINC00208Q96KT6 92 aa5.74□□□□□ -1.49
KLHL3-202ENST00000447439 LINC00472Q9H8W2 130 aa5.74□□□□□ -1.49
KLHL3-202ENST00000447439 KRTAP13-1Q8IUC0 172 aa5.74□□□□□ -1.49
KLHL3-202ENST00000447439 SPACA4Q8TDM5 124 aa5.74□□□□□ -1.49
KLHL3-202ENST00000447439 KRTAP29-1A8MX34 341 aaPredicted RBP5.73□□□□□ -1.49
KLHL3-202ENST00000447439 PRR15Q8IV56 129 aa5.73□□□□□ -1.49
KLHL3-202ENST00000447439 C1orf64Q8NEQ6 169 aa5.73□□□□□ -1.49
KLHL3-202ENST00000447439 NUPR2A6NF83 97 aa5.73□□□□□ -1.49
KLHL3-202ENST00000447439 C1orf195Q5TG92 126 aa5.73□□□□□ -1.49
KLHL3-202ENST00000447439 A0A087WTM6 91 aa5.72□□□□□ -1.49
KLHL3-202ENST00000447439 DNAH2Q9P225 4427 aa5.72□□□□□ -1.49
KLHL3-202ENST00000447439 A8MWP4 228 aa5.71□□□□□ -1.49
KLHL3-202ENST00000447439 hDV103S1A0JD37 113 aa5.71□□□□□ -1.5
KLHL3-202ENST00000447439 MEGF8Q7Z7M0 2845 aa5.71□□□□□ -1.5
KLHL3-202ENST00000447439 VPS13DQ5THJ4 4388 aa5.71□□□□□ -1.5
KLHL3-202ENST00000447439 H0Y9P7 68 aa5.71□□□□□ -1.5
KLHL3-202ENST00000447439 RTL8CO15255 209 aa5.71□□□□□ -1.5
KLHL3-202ENST00000447439 PSORS1C2Q9UIG4 136 aa5.71□□□□□ -1.5
KLHL3-202ENST00000447439 HECTD4Q9Y4D8 3996 aa5.7□□□□□ -1.5
KLHL3-202ENST00000447439 MP68P56378 58 aa5.7□□□□□ -1.5
KLHL3-202ENST00000447439 MOBPQ13875 183 aa5.7□□□□□ -1.5
KLHL3-202ENST00000447439 DNAH8Q96JB1 4490 aa5.69□□□□□ -1.5
KLHL3-202ENST00000447439 FBN3Q75N90 2809 aa5.69□□□□□ -1.5
KLHL3-202ENST00000447439 TGP01266 2768 aa5.69□□□□□ -1.5
KLHL3-202ENST00000447439 TRAV22A0A0B4J277 110 aa5.68□□□□□ -1.5
KLHL3-202ENST00000447439 MMP24-AS1A0A0U1RRL7 71 aa5.68□□□□□ -1.5
KLHL3-202ENST00000447439 NDUFB1O75438 58 aa5.68□□□□□ -1.5
KLHL3-202ENST00000447439 BRK1Q8WUW1 75 aa5.68□□□□□ -1.5
KLHL3-202ENST00000447439 Q96NJ1 140 aa5.68□□□□□ -1.5
KLHL3-202ENST00000447439 DNHD1Q96M86 4753 aa5.68□□□□□ -1.5
KLHL3-202ENST00000447439 CYP4F30PQ9H0H9 118 aa5.67□□□□□ -1.5
KLHL3-202ENST00000447439 DNAH17Q9UFH2 4485 aa5.67□□□□□ -1.5
KLHL3-202ENST00000447439 IGHV6-1A0A0B4J1U7 121 aa5.66□□□□□ -1.5
KLHL3-202ENST00000447439 H3BPC8 53 aa5.66□□□□□ -1.5
KLHL3-202ENST00000447439 A0A087X002 238 aa5.65□□□□□ -1.5
KLHL3-202ENST00000447439 IGLV5-52A0A0A0MRZ9 124 aa5.65□□□□□ -1.5
KLHL3-202ENST00000447439 PSPHP1O15172 72 aa5.65□□□□□ -1.5
KLHL3-202ENST00000447439 NOTCH2NLQ7Z3S9 236 aa5.65□□□□□ -1.5
KLHL3-202ENST00000447439 WWC2-AS2Q96NR7 200 aa5.65□□□□□ -1.51
KLHL3-202ENST00000447439 PCOTHQ58A44 107 aa5.64□□□□□ -1.51
KLHL3-202ENST00000447439 NDUFS5O43920 106 aa5.64□□□□□ -1.51
KLHL3-202ENST00000447439 SPINK6Q6UWN8 80 aa5.64□□□□□ -1.51
KLHL3-202ENST00000447439 DNAH6Q9C0G6 4158 aa5.63□□□□□ -1.51
KLHL3-202ENST00000447439 LY6G6CO95867 125 aa5.63□□□□□ -1.51
KLHL3-202ENST00000447439 LINC00483Q53H64 154 aa5.62□□□□□ -1.51
KLHL3-202ENST00000447439 Q6ZR54 194 aa5.62□□□□□ -1.51
KLHL3-202ENST00000447439 ZNF861PO60384 105 aa5.61□□□□□ -1.51
KLHL3-202ENST00000447439 C8orf17Q9NRJ1 99 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms