RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 SLC7A5P1Q8MH63 180 aa11.88□□□□□ -0.51
NUP50-211ENST00000445721 SMIM11BQ8TCY0 68 aa11.88□□□□□ -0.51
NUP50-211ENST00000445721 COPS9Q8WXC6 57 aa11.88□□□□□ -0.51
NUP50-211ENST00000445721 LST1O00453 97 aa11.87□□□□□ -0.51
NUP50-211ENST00000445721 SCGB1D4Q6XE38 83 aa11.87□□□□□ -0.51
NUP50-211ENST00000445721 FAM236DA0A1B0GTK5 79 aa11.86□□□□□ -0.51
NUP50-211ENST00000445721 A8MUU9 505 aa11.86□□□□□ -0.51
NUP50-211ENST00000445721 FAM236CP0DP71 79 aa11.86□□□□□ -0.51
NUP50-211ENST00000445721 IFITM1P13164 125 aa11.85□□□□□ -0.51
NUP50-211ENST00000445721 OCIAD2Q56VL3 154 aa11.85□□□□□ -0.51
NUP50-211ENST00000445721 TRAV13-2A0A0B4J235 113 aa11.84□□□□□ -0.51
NUP50-211ENST00000445721 LINC01545Q5VT33 79 aa11.84□□□□□ -0.51
NUP50-211ENST00000445721 LINC00846Q9NV44 126 aa11.83□□□□□ -0.52
NUP50-211ENST00000445721 Q6ZQY7 126 aa11.82□□□□□ -0.52
NUP50-211ENST00000445721 MUSTN1Q8IVN3 82 aa11.82□□□□□ -0.52
NUP50-211ENST00000445721 VAMP3Q15836 100 aa11.8□□□□□ -0.52
NUP50-211ENST00000445721 LINC00575Q6W349 94 aa11.8□□□□□ -0.52
NUP50-211ENST00000445721 PET117Q6UWS5 81 aa11.77□□□□□ -0.53
NUP50-211ENST00000445721 Q6ZVH6 145 aa11.77□□□□□ -0.53
NUP50-211ENST00000445721 hADV29S1A0JD25 119 aa11.76□□□□□ -0.53
NUP50-211ENST00000445721 KRTAP19-6Q3LI70 58 aa11.73□□□□□ -0.53
NUP50-211ENST00000445721 KRTAP16-1A8MUX0 517 aa11.71□□□□□ -0.53
NUP50-211ENST00000445721 H3BUT2 72 aa11.71□□□□□ -0.53
NUP50-211ENST00000445721 RBM12B-AS1Q9P1G2 102 aa11.7□□□□□ -0.54
NUP50-211ENST00000445721 SS18L2Q9UHA2 77 aa11.7□□□□□ -0.54
NUP50-211ENST00000445721 SNHG12Q9BXW3 62 aa11.69□□□□□ -0.54
NUP50-211ENST00000445721 DSCR10P59022 87 aa11.68□□□□□ -0.54
NUP50-211ENST00000445721 ANKRD39Q53RE8 183 aa11.67□□□□□ -0.54
NUP50-211ENST00000445721 MPLKIPQ8TAP9 179 aa11.67□□□□□ -0.54
NUP50-211ENST00000445721 COLCA2A8K830 154 aa11.66□□□□□ -0.54
NUP50-211ENST00000445721 C3orf79P0CE67 100 aa11.66□□□□□ -0.54
NUP50-211ENST00000445721 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.65□□□□□ -0.54
NUP50-211ENST00000445721 HRES1P13985 223 aa11.64□□□□□ -0.55
NUP50-211ENST00000445721 KRTAP6-3Q3LI67 103 aa11.64□□□□□ -0.55
NUP50-211ENST00000445721 SCGB1D1O95968 90 aa11.63□□□□□ -0.55
NUP50-211ENST00000445721 PPDPFLQ8WWR9 84 aa11.63□□□□□ -0.55
NUP50-211ENST00000445721 KRTDAPP60985 99 aa11.6□□□□□ -0.55
NUP50-211ENST00000445721 HIST1H2BKO60814 126 aa11.58□□□□□ -0.56
NUP50-211ENST00000445721 HIST1H2BJP06899 126 aa11.58□□□□□ -0.56
NUP50-211ENST00000445721 HIST1H2BOP23527 126 aa11.58□□□□□ -0.56
NUP50-211ENST00000445721 HIST1H2BBP33778 126 aa11.58□□□□□ -0.56
NUP50-211ENST00000445721 HIST1H2BDP58876 126 aa11.58□□□□□ -0.56
NUP50-211ENST00000445721 HIST1H2BCP62807 126 aa11.58□□□□□ -0.56
NUP50-211ENST00000445721 HIST2H2BEQ16778 126 aa11.58□□□□□ -0.56
NUP50-211ENST00000445721 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.58□□□□□ -0.56
NUP50-211ENST00000445721 TEN1Q86WV5 123 aa11.58□□□□□ -0.56
NUP50-211ENST00000445721 HIST1H2BHQ93079 126 aa11.58□□□□□ -0.56
NUP50-211ENST00000445721 HIST1H2BNQ99877 126 aa11.58□□□□□ -0.56
NUP50-211ENST00000445721 HIST1H2BMQ99879 126 aa11.58□□□□□ -0.56
NUP50-211ENST00000445721 ATOH7Q8N100 152 aa11.57□□□□□ -0.56
NUP50-211ENST00000445721 A0A087WSZ3 146 aa11.56□□□□□ -0.56
NUP50-211ENST00000445721 NOTCH2NLQ7Z3S9 236 aa11.54□□□□□ -0.56
NUP50-211ENST00000445721 LINC00313P59037 77 aa11.53□□□□□ -0.56
NUP50-211ENST00000445721 SIGMAR1Q99720 223 aa11.53□□□□□ -0.56
NUP50-211ENST00000445721 BVES-AS1Q5T3Y7 98 aa11.48□□□□□ -0.57
NUP50-211ENST00000445721 MTURNQ8N3F0 131 aa11.46□□□□□ -0.57
NUP50-211ENST00000445721 C12orf57Q99622 126 aa11.46□□□□□ -0.57
NUP50-211ENST00000445721 NDUFV3P56181 108 aaKnown RBP11.44□□□□□ -0.58
NUP50-211ENST00000445721 IGKV4-1P06312 121 aa11.41□□□□□ -0.58
NUP50-211ENST00000445721 H3BMG7 143 aa11.37□□□□□ -0.59
NUP50-211ENST00000445721 Q8N9P0 234 aaPredicted RBP11.37□□□□□ -0.59
NUP50-211ENST00000445721 A8MWP4 228 aa11.36□□□□□ -0.59
NUP50-211ENST00000445721 SNCGO76070 127 aa11.35□□□□□ -0.59
NUP50-211ENST00000445721 SNRPEP62304 92 aaKnown RBP11.35□□□□□ -0.59
NUP50-211ENST00000445721 A0A1W2PNM2 257 aa11.34□□□□□ -0.59
NUP50-211ENST00000445721 COA6Q5JTJ3 125 aaKnown RBP11.34□□□□□ -0.59
NUP50-211ENST00000445721 NEBP20929 6669 aa11.31□□□□□ -0.6
NUP50-211ENST00000445721 IGHV6-1A0A0B4J1U7 121 aa11.3□□□□□ -0.6
NUP50-211ENST00000445721 DEFB116Q30KQ4 102 aa11.3□□□□□ -0.6
NUP50-211ENST00000445721 FABP2P12104 132 aa11.28□□□□□ -0.6
NUP50-211ENST00000445721 FAM218AQ96MZ4 157 aa11.28□□□□□ -0.6
NUP50-211ENST00000445721 SPINK7P58062 85 aa11.27□□□□□ -0.61
NUP50-211ENST00000445721 H0YGX0 51 aa11.25□□□□□ -0.61
NUP50-211ENST00000445721 HIST1H4GQ99525 98 aa11.25□□□□□ -0.61
NUP50-211ENST00000445721 HSBP1L1C9JCN9 74 aa11.22□□□□□ -0.61
NUP50-211ENST00000445721 ZCCHC13Q8WW36 166 aaKnown RBP11.22□□□□□ -0.61
NUP50-211ENST00000445721 LINC00472Q9H8W2 130 aa11.22□□□□□ -0.61
NUP50-211ENST00000445721 TRBV7-4A0A0J9YYF1 115 aa11.2□□□□□ -0.62
NUP50-211ENST00000445721 GHRHP01286 108 aa11.2□□□□□ -0.62
NUP50-211ENST00000445721 ANKRD29Q8N6D5 301 aa11.19□□□□□ -0.62
NUP50-211ENST00000445721 MUC12Q9UKN1 5478 aa11.18□□□□□ -0.62
NUP50-211ENST00000445721 RAB37Q96AX2 223 aa11.17□□□□□ -0.62
NUP50-211ENST00000445721 A0A1B0GV72 72 aa11.15□□□□□ -0.62
NUP50-211ENST00000445721 C8orf87E5RJ46 101 aa11.14□□□□□ -0.63
NUP50-211ENST00000445721 KRTAP20-1Q3LI63 56 aa11.14□□□□□ -0.63
NUP50-211ENST00000445721 WFDC13Q8IUB5 93 aa11.14□□□□□ -0.63
NUP50-211ENST00000445721 A0A1B0GVX0 72 aa11.12□□□□□ -0.63
NUP50-211ENST00000445721 A0A1B0GX51 115 aa11.11□□□□□ -0.63
NUP50-211ENST00000445721 TRACP01848 142 aa11.08□□□□□ -0.64
NUP50-211ENST00000445721 CCKP06307 115 aa11.07□□□□□ -0.64
NUP50-211ENST00000445721 A0A0B4J2C4 111 aa11.05□□□□□ -0.64
NUP50-211ENST00000445721 COX8AP10176 69 aa11□□□□□ -0.65
NUP50-211ENST00000445721 HIST1H2BLQ99880 126 aa11□□□□□ -0.65
NUP50-211ENST00000445721 LYRM7Q5U5X0 104 aa10.98□□□□□ -0.65
NUP50-211ENST00000445721 ORMDL1Q9P0S3 153 aa10.98□□□□□ -0.65
NUP50-211ENST00000445721 A6NN06 94 aa10.97□□□□□ -0.65
NUP50-211ENST00000445721 HIST3H2BBQ8N257 126 aa10.97□□□□□ -0.65
NUP50-211ENST00000445721 S100A2P29034 98 aa10.96□□□□□ -0.65
NUP50-211ENST00000445721 DNAL4O96015 105 aa10.95□□□□□ -0.66
NUP50-211ENST00000445721 VPS25Q9BRG1 176 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms