RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 Q5XG85 94 aa3.77□□□□□ -1.81
RFX3-206ENST00000442560 COLCA2A8K830 154 aa3.76□□□□□ -1.81
RFX3-206ENST00000442560 IGLV5-48A0A075B6I7 105 aa3.75□□□□□ -1.81
RFX3-206ENST00000442560 TRBV7-6A0A0J9YX20 115 aa3.75□□□□□ -1.81
RFX3-206ENST00000442560 A0A1B0GWB2 263 aa3.75□□□□□ -1.81
RFX3-206ENST00000442560 A6NDN8 102 aa3.75□□□□□ -1.81
RFX3-206ENST00000442560 LINC01545Q5VT33 79 aa3.75□□□□□ -1.81
RFX3-206ENST00000442560 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
RFX3-206ENST00000442560 PET117Q6UWS5 81 aa3.74□□□□□ -1.81
RFX3-206ENST00000442560 SCGB1D4Q6XE38 83 aa3.74□□□□□ -1.81
RFX3-206ENST00000442560 TCL1BO95988 128 aa3.73□□□□□ -1.81
RFX3-206ENST00000442560 Q6Q795 121 aa3.73□□□□□ -1.81
RFX3-206ENST00000442560 MUSTN1Q8IVN3 82 aa3.73□□□□□ -1.81
RFX3-206ENST00000442560 HIST1H2BKO60814 126 aa3.72□□□□□ -1.81
RFX3-206ENST00000442560 HIST1H2BJP06899 126 aa3.72□□□□□ -1.81
RFX3-206ENST00000442560 C3orf79P0CE67 100 aa3.72□□□□□ -1.81
RFX3-206ENST00000442560 IFITM1P13164 125 aa3.72□□□□□ -1.81
RFX3-206ENST00000442560 HIST1H2BOP23527 126 aa3.72□□□□□ -1.81
RFX3-206ENST00000442560 HIST1H2BBP33778 126 aa3.72□□□□□ -1.81
RFX3-206ENST00000442560 HIST1H2BDP58876 126 aa3.72□□□□□ -1.81
RFX3-206ENST00000442560 HIST1H2BCP62807 126 aa3.72□□□□□ -1.81
RFX3-206ENST00000442560 HIST2H2BEQ16778 126 aa3.72□□□□□ -1.81
RFX3-206ENST00000442560 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.72□□□□□ -1.81
RFX3-206ENST00000442560 PCP2Q8IVA1 136 aa3.72□□□□□ -1.81
RFX3-206ENST00000442560 HIST1H2BHQ93079 126 aa3.72□□□□□ -1.81
RFX3-206ENST00000442560 HIST1H2BNQ99877 126 aa3.72□□□□□ -1.81
RFX3-206ENST00000442560 HIST1H2BMQ99879 126 aa3.72□□□□□ -1.81
RFX3-206ENST00000442560 A4D1N5 150 aa3.71□□□□□ -1.82
RFX3-206ENST00000442560 SLC7A5P1Q8MH63 180 aa3.71□□□□□ -1.82
RFX3-206ENST00000442560 SMIM11BQ8TCY0 68 aa3.71□□□□□ -1.82
RFX3-206ENST00000442560 NHP2Q9NX24 153 aaKnown RBP3.71□□□□□ -1.82
RFX3-206ENST00000442560 F8WEM9 126 aa3.7□□□□□ -1.82
RFX3-206ENST00000442560 KRTDAPP60985 99 aa3.7□□□□□ -1.82
RFX3-206ENST00000442560 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
RFX3-206ENST00000442560 COPS9Q8WXC6 57 aa3.7□□□□□ -1.82
RFX3-206ENST00000442560 TRAV13-2A0A0B4J235 113 aa3.69□□□□□ -1.82
RFX3-206ENST00000442560 ATP11AUNQ6ZP68 121 aa3.69□□□□□ -1.82
RFX3-206ENST00000442560 Q6ZVH6 145 aa3.69□□□□□ -1.82
RFX3-206ENST00000442560 ATOH7Q8N100 152 aa3.69□□□□□ -1.82
RFX3-206ENST00000442560 OBSCN-AS1Q96MR7 158 aa3.69□□□□□ -1.82
RFX3-206ENST00000442560 TRBV7-7A0A0K0K1E9 115 aa3.68□□□□□ -1.82
RFX3-206ENST00000442560 IGFL1Q6UW32 110 aa3.68□□□□□ -1.82
RFX3-206ENST00000442560 hADV29S1A0JD25 119 aa3.67□□□□□ -1.82
RFX3-206ENST00000442560 C20orf202A1L168 122 aa3.67□□□□□ -1.82
RFX3-206ENST00000442560 VAMP3Q15836 100 aa3.67□□□□□ -1.82
RFX3-206ENST00000442560 Q6JHZ5 121 aa3.67□□□□□ -1.82
RFX3-206ENST00000442560 LINC00575Q6W349 94 aa3.67□□□□□ -1.82
RFX3-206ENST00000442560 Q6ZQY7 126 aa3.67□□□□□ -1.82
RFX3-206ENST00000442560 Q75L30 129 aa3.67□□□□□ -1.82
RFX3-206ENST00000442560 CLEC2BQ92478 149 aa3.67□□□□□ -1.82
RFX3-206ENST00000442560 USH2AO75445 5202 aa3.66□□□□□ -1.82
RFX3-206ENST00000442560 OCIAD2Q56VL3 154 aa3.66□□□□□ -1.82
RFX3-206ENST00000442560 Q96NJ1 140 aa3.66□□□□□ -1.82
RFX3-206ENST00000442560 LST1O00453 97 aa3.65□□□□□ -1.83
RFX3-206ENST00000442560 COA6Q5JTJ3 125 aaKnown RBP3.64□□□□□ -1.83
RFX3-206ENST00000442560 H3BUT2 72 aa3.63□□□□□ -1.83
RFX3-206ENST00000442560 CFC1P0CG37 223 aa3.63□□□□□ -1.83
RFX3-206ENST00000442560 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.63□□□□□ -1.83
RFX3-206ENST00000442560 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
RFX3-206ENST00000442560 TRBV20-1A0A075B6N2 111 aa3.62□□□□□ -1.83
RFX3-206ENST00000442560 SNHG12Q9BXW3 62 aa3.62□□□□□ -1.83
RFX3-206ENST00000442560 A8MUU9 505 aa3.61□□□□□ -1.83
RFX3-206ENST00000442560 SNRPEP62304 92 aaKnown RBP3.61□□□□□ -1.83
RFX3-206ENST00000442560 C20orf166-AS1Q96NR2 134 aa3.61□□□□□ -1.83
RFX3-206ENST00000442560 C12orf57Q99622 126 aa3.61□□□□□ -1.83
RFX3-206ENST00000442560 BVES-AS1Q5T3Y7 98 aa3.6□□□□□ -1.83
RFX3-206ENST00000442560 PPDPFLQ8WWR9 84 aa3.6□□□□□ -1.83
RFX3-206ENST00000442560 SCGB1D1O95968 90 aa3.59□□□□□ -1.83
RFX3-206ENST00000442560 DSCR10P59022 87 aa3.59□□□□□ -1.83
RFX3-206ENST00000442560 SS18L2Q9UHA2 77 aa3.59□□□□□ -1.83
RFX3-206ENST00000442560 A0A087WSZ3 146 aa3.58□□□□□ -1.84
RFX3-206ENST00000442560 HSBP1L1C9JCN9 74 aa3.58□□□□□ -1.84
RFX3-206ENST00000442560 MT2AP02795 61 aa3.58□□□□□ -1.84
RFX3-206ENST00000442560 FAM236DA0A1B0GTK5 79 aa3.57□□□□□ -1.84
RFX3-206ENST00000442560 KRTAP16-1A8MUX0 517 aa3.57□□□□□ -1.84
RFX3-206ENST00000442560 FAM236CP0DP71 79 aa3.57□□□□□ -1.84
RFX3-206ENST00000442560 NDUFV3P56181 108 aaKnown RBP3.57□□□□□ -1.84
RFX3-206ENST00000442560 TEN1Q86WV5 123 aa3.57□□□□□ -1.84
RFX3-206ENST00000442560 HIST1H4GQ99525 98 aa3.57□□□□□ -1.84
RFX3-206ENST00000442560 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
RFX3-206ENST00000442560 MT1FP04733 61 aa3.56□□□□□ -1.84
RFX3-206ENST00000442560 H3BMG7 143 aa3.55□□□□□ -1.84
RFX3-206ENST00000442560 S100A2P29034 98 aa3.55□□□□□ -1.84
RFX3-206ENST00000442560 HIST3H2BBQ8N257 126 aa3.55□□□□□ -1.84
RFX3-206ENST00000442560 FAM218AQ96MZ4 157 aa3.55□□□□□ -1.84
RFX3-206ENST00000442560 SIGMAR1Q99720 223 aa3.55□□□□□ -1.84
RFX3-206ENST00000442560 HIST1H2BLQ99880 126 aa3.55□□□□□ -1.84
RFX3-206ENST00000442560 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
RFX3-206ENST00000442560 H0YGX0 51 aa3.54□□□□□ -1.84
RFX3-206ENST00000442560 SNCGO76070 127 aa3.54□□□□□ -1.84
RFX3-206ENST00000442560 FABP2P12104 132 aa3.54□□□□□ -1.84
RFX3-206ENST00000442560 LINC00313P59037 77 aa3.54□□□□□ -1.84
RFX3-206ENST00000442560 KRTAP10-10P60014 251 aa3.54□□□□□ -1.84
RFX3-206ENST00000442560 RAB37Q96AX2 223 aa3.54□□□□□ -1.84
RFX3-206ENST00000442560 A0A1W2PNM2 257 aa3.53□□□□□ -1.84
RFX3-206ENST00000442560 IGKV4-1P06312 121 aa3.53□□□□□ -1.84
RFX3-206ENST00000442560 HRES1P13985 223 aa3.53□□□□□ -1.84
RFX3-206ENST00000442560 Q8N9P0 234 aaPredicted RBP3.53□□□□□ -1.84
RFX3-206ENST00000442560 RBM12B-AS1Q9P1G2 102 aa3.53□□□□□ -1.84
RFX3-206ENST00000442560 COX8AP10176 69 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms