RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 NBEAL2Q6ZNJ1 2754 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 COL27A1Q8IZC6 1860 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 SVILO95425 2214 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 H0Y9P7 68 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGHV3-53P01767 116 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 SPATA8Q6RVD6 105 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 Q8NBF4 154 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 SPRR4Q96PI1 79 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 WFDC10AQ9H1F0 79 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 ANK3Q12955 4377 aaKnown RBP2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 ARFGEF3Q5TH69 2177 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
HMGB3P9-201ENST00000441799 NUPR2A6NF83 97 aa2.94□□□□□ -1.94
HMGB3P9-201ENST00000441799 I3L2K1 104 aa2.94□□□□□ -1.94
HMGB3P9-201ENST00000441799 NCR3O14931 201 aa2.94□□□□□ -1.94
HMGB3P9-201ENST00000441799 CCL18P55774 89 aa2.94□□□□□ -1.94
HMGB3P9-201ENST00000441799 NSD1Q96L73 2696 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P9-201ENST00000441799 TNCP24821 2201 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 NOTCH1P46531 2555 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGKV3-7A0A075B6H7 116 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGKV2-40A0A087WW87 121 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 K7EIM0 57 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 NDUFA4O00483 81 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 INSP01308 110 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGKV2D-40P01614 121 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 HAMPP81172 84 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 MINOS1Q5TGZ0 78 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 KCNQ1DNQ9H478 68 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 MINOS1-NBL1R4GNA1 71 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 BIRC6Q9NR09 4857 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 CADP27708 2225 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 MED13LQ71F56 2210 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 TGP01266 2768 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 PRR14LQ5THK1 2151 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGLV7-46A0A075B6I9 117 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGHV3-64A0A075B6Q5 118 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 LYNX1G3V0Z9 82 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 UQCR11O14957 56 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 MGPP08493 103 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 LYNX1P0DP58 116 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 NDPQ00604 133 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 C9orf163Q8N9P6 203 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 LINC00308Q8TCZ7 52 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 FLNAP21333 2647 aaKnown RBP2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 CSPG4Q6UVK1 2322 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 PLCE1Q9P212 2302 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 ETDCA0A1B0GVM5 59 aa2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGKV2-29A2NJV5 120 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGKV4-1P06312 121 aa2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 CRIP1P50238 77 aa2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 PRB3Q04118 309 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 Q5W150 140 aa2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 ACANP16112 2415 aa2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 EPPK1P58107 5090 aaKnown RBP2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 ZGRF1Q86YA3 2104 aa2.9□□□□□ -1.94
HMGB3P9-201ENST00000441799 TRGV4A0A0C4DH28 118 aa2.9□□□□□ -1.95
HMGB3P9-201ENST00000441799 LINC00959A0A1B0GUT2 108 aa2.9□□□□□ -1.95
HMGB3P9-201ENST00000441799 NDUFA1O15239 70 aa2.9□□□□□ -1.95
HMGB3P9-201ENST00000441799 ZNF861PO60384 105 aa2.9□□□□□ -1.95
HMGB3P9-201ENST00000441799 COA5Q86WW8 74 aa2.9□□□□□ -1.95
HMGB3P9-201ENST00000441799 PCLOQ9Y6V0 5065 aa2.89□□□□□ -1.95
HMGB3P9-201ENST00000441799 IGLV4-60A0A075B6I1 120 aa2.89□□□□□ -1.95
HMGB3P9-201ENST00000441799 TRGV2A0A075B6R0 118 aa2.89□□□□□ -1.95
HMGB3P9-201ENST00000441799 CR1P17927 2039 aa2.89□□□□□ -1.95
HMGB3P9-201ENST00000441799 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.89□□□□□ -1.95
HMGB3P9-201ENST00000441799 MALRD1Q5VYJ5 2156 aa2.88□□□□□ -1.95
HMGB3P9-201ENST00000441799 DEFB112Q30KQ8 113 aa2.88□□□□□ -1.95
HMGB3P9-201ENST00000441799 PKDREJQ9NTG1 2253 aa2.88□□□□□ -1.95
HMGB3P9-201ENST00000441799 RYR1P21817 5038 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 TLN2Q9Y4G6 2542 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 IGKV3OR2-268A0A0C4DH90 116 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 C14orf177Q52M58 125 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 Q6ZTI0 123 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 USMG5Q96IX5 58 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 KLK12Q9UKR0 248 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 SVEP1Q4LDE5 3571 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 PRKDCP78527 4128 aaKnown RBP2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 ROS1P08922 2347 aa2.86□□□□□ -1.95
HMGB3P9-201ENST00000441799 A0A1B0GU33 70 aa2.86□□□□□ -1.95
HMGB3P9-201ENST00000441799 H3BUA1 57 aa2.86□□□□□ -1.95
HMGB3P9-201ENST00000441799 HYDINQ4G0P3 5121 aa2.85□□□□□ -1.95
HMGB3P9-201ENST00000441799 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P9-201ENST00000441799 RNASE3P12724 160 aaKnown RBP2.85□□□□□ -1.95
HMGB3P9-201ENST00000441799 KRTAP7-1Q8IUC3 87 aa2.85□□□□□ -1.95
HMGB3P9-201ENST00000441799 SMR3AQ99954 134 aa2.85□□□□□ -1.95
HMGB3P9-201ENST00000441799 ABCA1O95477 2261 aa2.85□□□□□ -1.95
HMGB3P9-201ENST00000441799 TRBV6-4A0A1B0GX49 114 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 G3V318 75 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 IGLV7-43P04211 117 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 C5orf56Q8N8D9 126 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 SMIM11BQ8TCY0 68 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 C16orf74Q96GX8 76 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 ZANQ9Y493 2812 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 TRRAPQ9Y4A5 3859 aa2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 A0A087WTM6 91 aa2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 POLR2KP53803 58 aaKnown RBP2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 LY6EQ16553 131 aa2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 KLK9Q2XQG4 91 aa2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 LINC00612Q8N6U2 182 aa2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 RPL39LQ96EH5 51 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms