RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 KRTAP10-4P60372 401 aaPredicted RBP9.58□□□□□ -0.88
MCF2L-217ENST00000441756 ETDBQ3ZM63 59 aa9.57□□□□□ -0.88
MCF2L-217ENST00000441756 Q8N1X5 172 aa9.57□□□□□ -0.88
MCF2L-217ENST00000441756 APOBP04114 4563 aaKnown RBP9.55□□□□□ -0.88
MCF2L-217ENST00000441756 RBM3P98179 157 aaKnown RBP9.55□□□□□ -0.88
MCF2L-217ENST00000441756 C21orf62-AS1Q17RA5 79 aa9.55□□□□□ -0.88
MCF2L-217ENST00000441756 FAM229BQ4G0N7 80 aa9.55□□□□□ -0.88
MCF2L-217ENST00000441756 SMIM29Q86T20 159 aa9.54□□□□□ -0.88
MCF2L-217ENST00000441756 C3orf22Q8N5N4 141 aa9.54□□□□□ -0.88
MCF2L-217ENST00000441756 PDE6GP18545 87 aa9.53□□□□□ -0.88
MCF2L-217ENST00000441756 OBSCN-AS1Q96MR7 158 aa9.53□□□□□ -0.88
MCF2L-217ENST00000441756 DSCR8Q96T75 97 aa9.53□□□□□ -0.88
MCF2L-217ENST00000441756 IGLV8-61A0A075B6I0 122 aa9.51□□□□□ -0.89
MCF2L-217ENST00000441756 A0A1B0GV72 72 aa9.51□□□□□ -0.89
MCF2L-217ENST00000441756 Q6JHZ5 121 aa9.51□□□□□ -0.89
MCF2L-217ENST00000441756 C9orf153Q5TBE3 101 aa9.5□□□□□ -0.89
MCF2L-217ENST00000441756 Q8NBF4 154 aa9.5□□□□□ -0.89
MCF2L-217ENST00000441756 IGLV9-49A0A0B4J1Y8 123 aa9.49□□□□□ -0.89
MCF2L-217ENST00000441756 CRYGAP11844 174 aa9.49□□□□□ -0.89
MCF2L-217ENST00000441756 C14orf132Q9NPU4 83 aa9.49□□□□□ -0.89
MCF2L-217ENST00000441756 LOC110117498A0A087WWA1 95 aa9.48□□□□□ -0.89
MCF2L-217ENST00000441756 KRTAP1-4P0C5Y4 121 aa9.48□□□□□ -0.89
MCF2L-217ENST00000441756 ANAPC11Q9NYG5 84 aa9.48□□□□□ -0.89
MCF2L-217ENST00000441756 TRBV7-4A0A0J9YYF1 115 aa9.47□□□□□ -0.89
MCF2L-217ENST00000441756 J3QR89 54 aa9.46□□□□□ -0.9
MCF2L-217ENST00000441756 MOBPQ13875 183 aa9.46□□□□□ -0.9
MCF2L-217ENST00000441756 HERC2O95714 4834 aa9.45□□□□□ -0.9
MCF2L-217ENST00000441756 SSBP3-AS1Q7Z2R9 100 aa9.44□□□□□ -0.9
MCF2L-217ENST00000441756 VPS13BQ7Z7G8 4022 aa9.44□□□□□ -0.9
MCF2L-217ENST00000441756 Q6ZQT0 140 aa9.43□□□□□ -0.9
MCF2L-217ENST00000441756 A0A087X002 238 aa9.42□□□□□ -0.9
MCF2L-217ENST00000441756 CCKP06307 115 aa9.42□□□□□ -0.9
MCF2L-217ENST00000441756 IGFL1Q6UW32 110 aa9.42□□□□□ -0.9
MCF2L-217ENST00000441756 HSPG2P98160 4391 aa9.4□□□□□ -0.9
MCF2L-217ENST00000441756 K7ERU9 68 aa9.4□□□□□ -0.9
MCF2L-217ENST00000441756 TYMSOSQ8TAI1 123 aa9.4□□□□□ -0.9
MCF2L-217ENST00000441756 VPS25Q9BRG1 176 aa9.4□□□□□ -0.9
MCF2L-217ENST00000441756 RYR1P21817 5038 aa9.4□□□□□ -0.9
MCF2L-217ENST00000441756 A0A1B0GW54 56 aa9.39□□□□□ -0.91
MCF2L-217ENST00000441756 KRTAP13-2Q52LG2 175 aa9.39□□□□□ -0.91
MCF2L-217ENST00000441756 PCLOQ9Y6V0 5065 aa9.38□□□□□ -0.91
MCF2L-217ENST00000441756 SRRM2Q9UQ35 2752 aaKnown RBP9.38□□□□□ -0.91
MCF2L-217ENST00000441756 ACYP1P07311 99 aa9.37□□□□□ -0.91
MCF2L-217ENST00000441756 Q6Q795 121 aa9.37□□□□□ -0.91
MCF2L-217ENST00000441756 PRR26Q8N8Z3 221 aa9.37□□□□□ -0.91
MCF2L-217ENST00000441756 FAM240AA0A1B0GVK7 77 aa9.36□□□□□ -0.91
MCF2L-217ENST00000441756 CD164Q04900 197 aa9.35□□□□□ -0.91
MCF2L-217ENST00000441756 A0A1W2PNM2 257 aa9.34□□□□□ -0.91
MCF2L-217ENST00000441756 KIAA1109Q2LD37 5005 aa9.34□□□□□ -0.91
MCF2L-217ENST00000441756 C4orf48Q5BLP8 95 aa9.33□□□□□ -0.92
MCF2L-217ENST00000441756 FAT1Q14517 4588 aa9.31□□□□□ -0.92
MCF2L-217ENST00000441756 A0A0G2JQZ4 141 aa9.31□□□□□ -0.92
MCF2L-217ENST00000441756 TRBV7-7A0A0K0K1E9 115 aa9.3□□□□□ -0.92
MCF2L-217ENST00000441756 SPAG11AQ6PDA7 123 aa9.3□□□□□ -0.92
MCF2L-217ENST00000441756 SS18L2Q9UHA2 77 aa9.3□□□□□ -0.92
MCF2L-217ENST00000441756 LINC00304Q8N9R0 145 aa9.29□□□□□ -0.92
MCF2L-217ENST00000441756 OXTP01178 125 aa9.28□□□□□ -0.92
MCF2L-217ENST00000441756 HRCT1Q6UXD1 115 aa9.28□□□□□ -0.92
MCF2L-217ENST00000441756 A0A087WSZ3 146 aa9.27□□□□□ -0.93
MCF2L-217ENST00000441756 UBL5Q9BZL1 73 aa9.27□□□□□ -0.93
MCF2L-217ENST00000441756 PKHD1L1Q86WI1 4243 aa9.27□□□□□ -0.93
MCF2L-217ENST00000441756 SPINK1P00995 79 aa9.26□□□□□ -0.93
MCF2L-217ENST00000441756 LIMD2Q9BT23 127 aa9.26□□□□□ -0.93
MCF2L-217ENST00000441756 RPS29P62273 56 aaKnown RBP9.24□□□□□ -0.93
MCF2L-217ENST00000441756 KRTAP4-5Q9BYR2 181 aa9.24□□□□□ -0.93
MCF2L-217ENST00000441756 LINC00846Q9NV44 126 aa9.24□□□□□ -0.93
MCF2L-217ENST00000441756 KRTAP10-8P60410 259 aa9.23□□□□□ -0.93
MCF2L-217ENST00000441756 NREPQ16612 68 aa9.23□□□□□ -0.93
MCF2L-217ENST00000441756 Q5XG85 94 aa9.21□□□□□ -0.94
MCF2L-217ENST00000441756 KRTAP29-1A8MX34 341 aaPredicted RBP9.19□□□□□ -0.94
MCF2L-217ENST00000441756 Q6ZVQ6 151 aa9.19□□□□□ -0.94
MCF2L-217ENST00000441756 ASB16-AS1Q495Z4 193 aa9.18□□□□□ -0.94
MCF2L-217ENST00000441756 ATP5EP2Q5VTU8 51 aa9.16□□□□□ -0.94
MCF2L-217ENST00000441756 LINC00643Q86TS7 51 aa9.16□□□□□ -0.94
MCF2L-217ENST00000441756 J3KT08 172 aa9.14□□□□□ -0.95
MCF2L-217ENST00000441756 MT1HL1P0DM35 61 aa9.14□□□□□ -0.95
MCF2L-217ENST00000441756 CDIP1Q9H305 208 aa9.14□□□□□ -0.95
MCF2L-217ENST00000441756 FLG2Q5D862 2391 aaPredicted RBP9.13□□□□□ -0.95
MCF2L-217ENST00000441756 BPY2O14599 106 aa9.12□□□□□ -0.95
MCF2L-217ENST00000441756 SIGMAR1Q99720 223 aa9.12□□□□□ -0.95
MCF2L-217ENST00000441756 LINC00472Q9H8W2 130 aa9.11□□□□□ -0.95
MCF2L-217ENST00000441756 ABCA13Q86UQ4 5058 aa9.11□□□□□ -0.95
MCF2L-217ENST00000441756 CXCL6P80162 114 aa9.1□□□□□ -0.95
MCF2L-217ENST00000441756 J3QL48 77 aa9.09□□□□□ -0.95
MCF2L-217ENST00000441756 IGKV4-1P06312 121 aa9.07□□□□□ -0.96
MCF2L-217ENST00000441756 Q96NJ1 140 aa9.07□□□□□ -0.96
MCF2L-217ENST00000441756 C1orf195Q5TG92 126 aa9.06□□□□□ -0.96
MCF2L-217ENST00000441756 NDUFB1O75438 58 aa9.05□□□□□ -0.96
MCF2L-217ENST00000441756 IGKV3D-7A0A0C4DH55 119 aa9.04□□□□□ -0.96
MCF2L-217ENST00000441756 DEFB116Q30KQ4 102 aa9.04□□□□□ -0.96
MCF2L-217ENST00000441756 A8MWP4 228 aa9.02□□□□□ -0.97
MCF2L-217ENST00000441756 DSCR10P59022 87 aa9□□□□□ -0.97
MCF2L-217ENST00000441756 IMUPQ9GZP8 106 aa8.99□□□□□ -0.97
MCF2L-217ENST00000441756 FAT3Q8TDW7 4589 aa8.98□□□□□ -0.97
MCF2L-217ENST00000441756 MT-ATP8P03928 68 aa8.98□□□□□ -0.97
MCF2L-217ENST00000441756 FP248Q71RG6 208 aaPredicted RBP8.98□□□□□ -0.97
MCF2L-217ENST00000441756 LRP1Q07954 4544 aaKnown RBP8.97□□□□□ -0.97
MCF2L-217ENST00000441756 HIST1H4AP62805 103 aaKnown RBP8.97□□□□□ -0.97
MCF2L-217ENST00000441756 PRR15Q8IV56 129 aa8.97□□□□□ -0.97
MCF2L-217ENST00000441756 A0A1B0GVX0 72 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms