RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 IGFL1Q6UW32 110 aa3.7□□□□□ -1.82
VPS50-205ENST00000441602 SCXQ7RTU7 201 aa3.7□□□□□ -1.82
VPS50-205ENST00000441602 CIRBP-AS1Q8TBR5 109 aa3.7□□□□□ -1.82
VPS50-205ENST00000441602 KRTAP10-1P60331 282 aa3.69□□□□□ -1.82
VPS50-205ENST00000441602 Q6ZSA8 131 aa3.69□□□□□ -1.82
VPS50-205ENST00000441602 LINC00483Q53H64 154 aa3.69□□□□□ -1.82
VPS50-205ENST00000441602 SS18L2Q9UHA2 77 aa3.69□□□□□ -1.82
VPS50-205ENST00000441602 FBN3Q75N90 2809 aa3.69□□□□□ -1.82
VPS50-205ENST00000441602 MEGF8Q7Z7M0 2845 aa3.69□□□□□ -1.82
VPS50-205ENST00000441602 SMIM20Q8N5G0 67 aa3.68□□□□□ -1.82
VPS50-205ENST00000441602 ALMS1Q8TCU4 4167 aa3.68□□□□□ -1.82
VPS50-205ENST00000441602 IGLV9-49A0A0B4J1Y8 123 aa3.68□□□□□ -1.82
VPS50-205ENST00000441602 VPS13DQ5THJ4 4388 aa3.67□□□□□ -1.82
VPS50-205ENST00000441602 FAM30AQ9NZY2 134 aa3.67□□□□□ -1.82
VPS50-205ENST00000441602 COL7A1Q02388 2944 aa3.67□□□□□ -1.82
VPS50-205ENST00000441602 A0A087WSZ3 146 aa3.67□□□□□ -1.82
VPS50-205ENST00000441602 J3KT08 172 aa3.67□□□□□ -1.82
VPS50-205ENST00000441602 SSBP3-AS1Q7Z2R9 100 aa3.66□□□□□ -1.82
VPS50-205ENST00000441602 MOBPQ13875 183 aa3.65□□□□□ -1.82
VPS50-205ENST00000441602 FAM229BQ4G0N7 80 aa3.65□□□□□ -1.83
VPS50-205ENST00000441602 CDK2AP2O75956 126 aa3.65□□□□□ -1.83
VPS50-205ENST00000441602 DNAH1Q9P2D7 4330 aa3.65□□□□□ -1.83
VPS50-205ENST00000441602 PRKDCP78527 4128 aaKnown RBP3.64□□□□□ -1.83
VPS50-205ENST00000441602 A0A087WVE0 104 aa3.64□□□□□ -1.83
VPS50-205ENST00000441602 NDUFB1O75438 58 aa3.64□□□□□ -1.83
VPS50-205ENST00000441602 DNHD1Q96M86 4753 aa3.64□□□□□ -1.83
VPS50-205ENST00000441602 CD164Q04900 197 aa3.64□□□□□ -1.83
VPS50-205ENST00000441602 SERP2Q8N6R1 65 aa3.63□□□□□ -1.83
VPS50-205ENST00000441602 PLECQ15149 4684 aaKnown RBP3.63□□□□□ -1.83
VPS50-205ENST00000441602 TENM2Q9NT68 2774 aa3.63□□□□□ -1.83
VPS50-205ENST00000441602 UQCRQO14949 82 aa3.63□□□□□ -1.83
VPS50-205ENST00000441602 DNAH6Q9C0G6 4158 aa3.63□□□□□ -1.83
VPS50-205ENST00000441602 IGKV4-1P06312 121 aa3.62□□□□□ -1.83
VPS50-205ENST00000441602 COX7CP15954 63 aa3.62□□□□□ -1.83
VPS50-205ENST00000441602 TRAV7A0A075B6U4 112 aa3.62□□□□□ -1.83
VPS50-205ENST00000441602 SPINK6Q6UWN8 80 aa3.62□□□□□ -1.83
VPS50-205ENST00000441602 A0A1B0GVY2 172 aa3.61□□□□□ -1.83
VPS50-205ENST00000441602 C4orf48Q5BLP8 95 aa3.61□□□□□ -1.83
VPS50-205ENST00000441602 DNAH7Q8WXX0 4024 aa3.61□□□□□ -1.83
VPS50-205ENST00000441602 A0A0G2JQZ4 141 aa3.61□□□□□ -1.83
VPS50-205ENST00000441602 STARD9Q9P2P6 4700 aa3.6□□□□□ -1.83
VPS50-205ENST00000441602 HRCT1Q6UXD1 115 aa3.6□□□□□ -1.83
VPS50-205ENST00000441602 LIMD2Q9BT23 127 aa3.6□□□□□ -1.83
VPS50-205ENST00000441602 A8MWP4 228 aa3.6□□□□□ -1.83
VPS50-205ENST00000441602 ANAPC11Q9NYG5 84 aa3.6□□□□□ -1.83
VPS50-205ENST00000441602 HCG22E2RYF7 251 aa3.59□□□□□ -1.83
VPS50-205ENST00000441602 DSCR10P59022 87 aa3.59□□□□□ -1.83
VPS50-205ENST00000441602 Q8N9L7 120 aa3.59□□□□□ -1.83
VPS50-205ENST00000441602 PLA2G1BP04054 148 aaKnown RBP3.59□□□□□ -1.83
VPS50-205ENST00000441602 LINC00472Q9H8W2 130 aa3.58□□□□□ -1.84
VPS50-205ENST00000441602 K7EQZ3 153 aa3.58□□□□□ -1.84
VPS50-205ENST00000441602 PRR15Q8IV56 129 aa3.58□□□□□ -1.84
VPS50-205ENST00000441602 DNAH17Q9UFH2 4485 aa3.58□□□□□ -1.84
VPS50-205ENST00000441602 FAM229AH3BQW9 127 aa3.58□□□□□ -1.84
VPS50-205ENST00000441602 CCDC179H3BU77 68 aa3.58□□□□□ -1.84
VPS50-205ENST00000441602 TYMSOSQ8TAI1 123 aa3.57□□□□□ -1.84
VPS50-205ENST00000441602 DEFB116Q30KQ4 102 aa3.57□□□□□ -1.84
VPS50-205ENST00000441602 SPAG11AQ6PDA7 123 aa3.57□□□□□ -1.84
VPS50-205ENST00000441602 CASC2Q6XLA1 102 aa3.57□□□□□ -1.84
VPS50-205ENST00000441602 ASB16-AS1Q495Z4 193 aa3.56□□□□□ -1.84
VPS50-205ENST00000441602 WFDC13Q8IUB5 93 aa3.56□□□□□ -1.84
VPS50-205ENST00000441602 DNAH10Q8IVF4 4471 aa3.56□□□□□ -1.84
VPS50-205ENST00000441602 TGP01266 2768 aa3.56□□□□□ -1.84
VPS50-205ENST00000441602 SMR3BP02814 79 aaPredicted RBP3.56□□□□□ -1.84
VPS50-205ENST00000441602 A0A1B0GVX0 72 aa3.55□□□□□ -1.84
VPS50-205ENST00000441602 C8orf87E5RJ46 101 aa3.55□□□□□ -1.84
VPS50-205ENST00000441602 Q5XG85 94 aa3.55□□□□□ -1.84
VPS50-205ENST00000441602 NDUFC1O43677 76 aa3.54□□□□□ -1.84
VPS50-205ENST00000441602 C20orf197Q8N268 126 aa3.54□□□□□ -1.84
VPS50-205ENST00000441602 SPINK1P00995 79 aa3.54□□□□□ -1.84
VPS50-205ENST00000441602 MP68P56378 58 aa3.54□□□□□ -1.84
VPS50-205ENST00000441602 CSMD3Q7Z407 3707 aa3.54□□□□□ -1.84
VPS50-205ENST00000441602 KRTAP1-4P0C5Y4 121 aa3.54□□□□□ -1.84
VPS50-205ENST00000441602 KRTAP13-2Q52LG2 175 aa3.54□□□□□ -1.84
VPS50-205ENST00000441602 C8orf17Q9NRJ1 99 aa3.54□□□□□ -1.84
VPS50-205ENST00000441602 A0A087X002 238 aa3.53□□□□□ -1.84
VPS50-205ENST00000441602 LINC00304Q8N9R0 145 aa3.53□□□□□ -1.84
VPS50-205ENST00000441602 DNAH2Q9P225 4427 aa3.53□□□□□ -1.84
VPS50-205ENST00000441602 IGHV6-1A0A0B4J1U7 121 aa3.53□□□□□ -1.84
VPS50-205ENST00000441602 hDV103S1A0JD37 113 aa3.53□□□□□ -1.84
VPS50-205ENST00000441602 C5orf47Q569G3 176 aa3.53□□□□□ -1.84
VPS50-205ENST00000441602 OCR1Q9BZK8 76 aa3.53□□□□□ -1.84
VPS50-205ENST00000441602 TP53AIP1Q9HCN2 124 aa3.53□□□□□ -1.84
VPS50-205ENST00000441602 RPS29P62273 56 aaKnown RBP3.52□□□□□ -1.85
VPS50-205ENST00000441602 Q96NJ1 140 aa3.52□□□□□ -1.85
VPS50-205ENST00000441602 TMEM258P61165 79 aa3.52□□□□□ -1.85
VPS50-205ENST00000441602 TMEM254Q8TBM7 123 aa3.52□□□□□ -1.85
VPS50-205ENST00000441602 MMP24-AS1A0A0U1RRL7 71 aa3.51□□□□□ -1.85
VPS50-205ENST00000441602 H3BPC8 53 aa3.51□□□□□ -1.85
VPS50-205ENST00000441602 LCE2BO14633 110 aa3.51□□□□□ -1.85
VPS50-205ENST00000441602 KRTAP29-1A8MX34 341 aaPredicted RBP3.51□□□□□ -1.85
VPS50-205ENST00000441602 PRR26Q8N8Z3 221 aa3.51□□□□□ -1.85
VPS50-205ENST00000441602 NDUFS5O43920 106 aa3.5□□□□□ -1.85
VPS50-205ENST00000441602 KLKP1Q107X0 134 aa3.5□□□□□ -1.85
VPS50-205ENST00000441602 MRPL34Q9BQ48 92 aaKnown RBP3.5□□□□□ -1.85
VPS50-205ENST00000441602 ATP5EP56381 51 aaPredicted RBP3.5□□□□□ -1.85
VPS50-205ENST00000441602 LCE2AQ5TA79 106 aaPredicted RBP3.49□□□□□ -1.85
VPS50-205ENST00000441602 C1orf195Q5TG92 126 aa3.49□□□□□ -1.85
VPS50-205ENST00000441602 LINC00313P59037 77 aa3.49□□□□□ -1.85
VPS50-205ENST00000441602 SNURFQ9Y675 71 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms