RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 NKAPP1Q8N9T2 125 aa3.9□□□□□ -1.78
PTPRR-204ENST00000440835 FAT1Q14517 4588 aa3.9□□□□□ -1.78
PTPRR-204ENST00000440835 SRRM2Q9UQ35 2752 aaKnown RBP3.9□□□□□ -1.79
PTPRR-204ENST00000440835 A0A087WZ39 114 aa3.89□□□□□ -1.79
PTPRR-204ENST00000440835 ATP5EP2Q5VTU8 51 aa3.89□□□□□ -1.79
PTPRR-204ENST00000440835 MPLKIPQ8TAP9 179 aa3.89□□□□□ -1.79
PTPRR-204ENST00000440835 PLA2G2DQ9UNK4 145 aa3.89□□□□□ -1.79
PTPRR-204ENST00000440835 IGKV2D-24A0A075B6R9 120 aa3.89□□□□□ -1.79
PTPRR-204ENST00000440835 SMIM1B2RUZ4 78 aa3.89□□□□□ -1.79
PTPRR-204ENST00000440835 RPL37AP61513 92 aaKnown RBP3.89□□□□□ -1.79
PTPRR-204ENST00000440835 C7orf65Q6ZTY9 151 aa3.89□□□□□ -1.79
PTPRR-204ENST00000440835 TRAV13-2A0A0B4J235 113 aa3.89□□□□□ -1.79
PTPRR-204ENST00000440835 CRPP02741 224 aa3.89□□□□□ -1.79
PTPRR-204ENST00000440835 LINC00242Q5T6M2 205 aa3.89□□□□□ -1.79
PTPRR-204ENST00000440835 NOTCH2NLQ7Z3S9 236 aa3.89□□□□□ -1.79
PTPRR-204ENST00000440835 CIRBP-AS1Q8TBR5 109 aa3.89□□□□□ -1.79
PTPRR-204ENST00000440835 FLG2Q5D862 2391 aaPredicted RBP3.88□□□□□ -1.79
PTPRR-204ENST00000440835 PSPHP1O15172 72 aa3.88□□□□□ -1.79
PTPRR-204ENST00000440835 ANGP03950 147 aaKnown RBP3.88□□□□□ -1.79
PTPRR-204ENST00000440835 KIAA0087Q14695 138 aa3.88□□□□□ -1.79
PTPRR-204ENST00000440835 IGKV3OR2-268A0A0C4DH90 116 aa3.88□□□□□ -1.79
PTPRR-204ENST00000440835 TRBV10-3A0A0K0K1G6 114 aa3.88□□□□□ -1.79
PTPRR-204ENST00000440835 PRR3P79522 188 aaKnown RBP3.88□□□□□ -1.79
PTPRR-204ENST00000440835 S100A7L2Q5SY68 101 aa3.88□□□□□ -1.79
PTPRR-204ENST00000440835 C9orf163Q8N9P6 203 aa3.88□□□□□ -1.79
PTPRR-204ENST00000440835 DIRC1Q969H9 104 aa3.88□□□□□ -1.79
PTPRR-204ENST00000440835 KLK12Q9UKR0 248 aa3.88□□□□□ -1.79
PTPRR-204ENST00000440835 IGLV4-60A0A075B6I1 120 aa3.87□□□□□ -1.79
PTPRR-204ENST00000440835 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.87□□□□□ -1.79
PTPRR-204ENST00000440835 LINC00959A0A1B0GUT2 108 aa3.87□□□□□ -1.79
PTPRR-204ENST00000440835 ORMDL1Q9P0S3 153 aa3.87□□□□□ -1.79
PTPRR-204ENST00000440835 UBE2AP49459 152 aa3.87□□□□□ -1.79
PTPRR-204ENST00000440835 CNBPP62633 177 aaKnown RBP3.87□□□□□ -1.79
PTPRR-204ENST00000440835 SND1-IT1Q9HBX3 110 aa3.87□□□□□ -1.79
PTPRR-204ENST00000440835 PRR34Q9NV39 138 aa3.87□□□□□ -1.79
PTPRR-204ENST00000440835 H0YGX0 51 aa3.86□□□□□ -1.79
PTPRR-204ENST00000440835 LINC00313P59037 77 aa3.86□□□□□ -1.79
PTPRR-204ENST00000440835 HAMPP81172 84 aa3.86□□□□□ -1.79
PTPRR-204ENST00000440835 REG3AQ06141 175 aa3.86□□□□□ -1.79
PTPRR-204ENST00000440835 Q1T7F1 81 aa3.86□□□□□ -1.79
PTPRR-204ENST00000440835 ATP11AUNQ6ZP68 121 aa3.86□□□□□ -1.79
PTPRR-204ENST00000440835 COX7B2Q8TF08 81 aa3.86□□□□□ -1.79
PTPRR-204ENST00000440835 TRBV7-4A0A0J9YYF1 115 aa3.85□□□□□ -1.79
PTPRR-204ENST00000440835 LINC00269Q8N2A0 174 aa3.85□□□□□ -1.79
PTPRR-204ENST00000440835 C6orf99Q4VX62 202 aa3.85□□□□□ -1.79
PTPRR-204ENST00000440835 UBL5Q9BZL1 73 aa3.85□□□□□ -1.79
PTPRR-204ENST00000440835 LINC01547P58512 204 aaPredicted RBP3.85□□□□□ -1.79
PTPRR-204ENST00000440835 CHCHD10Q8WYQ3 142 aaPredicted RBP3.85□□□□□ -1.79
PTPRR-204ENST00000440835 LINC01554Q52M75 96 aa3.84□□□□□ -1.79
PTPRR-204ENST00000440835 CLPSL2Q6UWE3 100 aa3.84□□□□□ -1.79
PTPRR-204ENST00000440835 Q8N3U1 123 aa3.84□□□□□ -1.79
PTPRR-204ENST00000440835 LINC00167Q96N53 147 aa3.84□□□□□ -1.79
PTPRR-204ENST00000440835 TOMM7Q9P0U1 55 aa3.84□□□□□ -1.79
PTPRR-204ENST00000440835 JMJD7-PLA2G4BH0Y9G9 81 aa3.84□□□□□ -1.8
PTPRR-204ENST00000440835 KRTAP26-1Q6PEX3 210 aa3.83□□□□□ -1.8
PTPRR-204ENST00000440835 Q8IZM0 81 aa3.83□□□□□ -1.8
PTPRR-204ENST00000440835 IGHV6-1A0A0B4J1U7 121 aa3.83□□□□□ -1.8
PTPRR-204ENST00000440835 SEC61BP60468 96 aaKnown RBP3.83□□□□□ -1.8
PTPRR-204ENST00000440835 C7orf33Q8WU49 177 aa3.83□□□□□ -1.8
PTPRR-204ENST00000440835 FAT3Q8TDW7 4589 aa3.82□□□□□ -1.8
PTPRR-204ENST00000440835 PLAC8Q9NZF1 115 aa3.82□□□□□ -1.8
PTPRR-204ENST00000440835 LINC00158P58513 81 aa3.82□□□□□ -1.8
PTPRR-204ENST00000440835 Q6ZQT0 140 aa3.82□□□□□ -1.8
PTPRR-204ENST00000440835 IGLV10-54A0A075B6I4 117 aa3.81□□□□□ -1.8
PTPRR-204ENST00000440835 TMEM254Q8TBM7 123 aa3.81□□□□□ -1.8
PTPRR-204ENST00000440835 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
PTPRR-204ENST00000440835 SPACA4Q8TDM5 124 aa3.81□□□□□ -1.8
PTPRR-204ENST00000440835 NREPQ16612 68 aa3.8□□□□□ -1.8
PTPRR-204ENST00000440835 HMCN2Q8NDA2 5059 aa3.8□□□□□ -1.8
PTPRR-204ENST00000440835 A6NN06 94 aa3.8□□□□□ -1.8
PTPRR-204ENST00000440835 SPAG11BQ08648 103 aa3.8□□□□□ -1.8
PTPRR-204ENST00000440835 COX17Q14061 63 aa3.8□□□□□ -1.8
PTPRR-204ENST00000440835 REG3GQ6UW15 175 aa3.8□□□□□ -1.8
PTPRR-204ENST00000440835 Q6ZRP5 223 aa3.8□□□□□ -1.8
PTPRR-204ENST00000440835 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.8□□□□□ -1.8
PTPRR-204ENST00000440835 A8MU10 97 aa3.79□□□□□ -1.8
PTPRR-204ENST00000440835 ASB16-AS1Q495Z4 193 aa3.79□□□□□ -1.8
PTPRR-204ENST00000440835 LOC110117498A0A087WWA1 95 aa3.78□□□□□ -1.8
PTPRR-204ENST00000440835 A0A087X002 238 aa3.78□□□□□ -1.8
PTPRR-204ENST00000440835 SPINK6Q6UWN8 80 aa3.78□□□□□ -1.8
PTPRR-204ENST00000440835 ZNF706Q9Y5V0 76 aaPredicted RBP3.78□□□□□ -1.8
PTPRR-204ENST00000440835 GVQW2A0A096LPI5 108 aaPredicted RBP3.78□□□□□ -1.8
PTPRR-204ENST00000440835 BPY2O14599 106 aa3.78□□□□□ -1.8
PTPRR-204ENST00000440835 XP32Q5T750 250 aa3.78□□□□□ -1.8
PTPRR-204ENST00000440835 LCE2CQ5TA81 110 aa3.78□□□□□ -1.8
PTPRR-204ENST00000440835 hDV103S1A0JD37 113 aa3.77□□□□□ -1.81
PTPRR-204ENST00000440835 ERC2-IT1O76042 136 aa3.77□□□□□ -1.81
PTPRR-204ENST00000440835 HIGD2AQ9BW72 106 aa3.77□□□□□ -1.81
PTPRR-204ENST00000440835 A0A1B0GW54 56 aa3.76□□□□□ -1.81
PTPRR-204ENST00000440835 CAMK2N2Q96S95 79 aa3.76□□□□□ -1.81
PTPRR-204ENST00000440835 Q8N9L7 120 aa3.76□□□□□ -1.81
PTPRR-204ENST00000440835 OCR1Q9BZK8 76 aa3.76□□□□□ -1.81
PTPRR-204ENST00000440835 C15orf56Q8N910 161 aa3.76□□□□□ -1.81
PTPRR-204ENST00000440835 LRP1Q07954 4544 aaKnown RBP3.75□□□□□ -1.81
PTPRR-204ENST00000440835 PANO1I0J062 215 aa3.75□□□□□ -1.81
PTPRR-204ENST00000440835 KRTAP10-8P60410 259 aa3.75□□□□□ -1.81
PTPRR-204ENST00000440835 CYP4F30PQ9H0H9 118 aa3.75□□□□□ -1.81
PTPRR-204ENST00000440835 TRAV22A0A0B4J277 110 aa3.75□□□□□ -1.81
PTPRR-204ENST00000440835 SYCNQ0VAF6 134 aa3.75□□□□□ -1.81
PTPRR-204ENST00000440835 LINC00575Q6W349 94 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 228.7 ms