RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 MUSTN1Q8IVN3 82 aa7.2□□□□□ -1.26
PTPRN-205ENST00000440552 C20orf166-AS1Q96NR2 134 aa7.2□□□□□ -1.26
PTPRN-205ENST00000440552 TRBV20-1A0A075B6N2 111 aa7.19□□□□□ -1.26
PTPRN-205ENST00000440552 MT2AP02795 61 aa7.19□□□□□ -1.26
PTPRN-205ENST00000440552 VAMP3Q15836 100 aa7.19□□□□□ -1.26
PTPRN-205ENST00000440552 LINC00575Q6W349 94 aa7.19□□□□□ -1.26
PTPRN-205ENST00000440552 Q96NJ1 140 aa7.19□□□□□ -1.26
PTPRN-205ENST00000440552 A8MUU9 505 aa7.18□□□□□ -1.26
PTPRN-205ENST00000440552 KRTAP19-1Q8IUB9 90 aa7.18□□□□□ -1.26
PTPRN-205ENST00000440552 LST1O00453 97 aa7.17□□□□□ -1.26
PTPRN-205ENST00000440552 Q6ZQY7 126 aa7.17□□□□□ -1.26
PTPRN-205ENST00000440552 SLC7A5P1Q8MH63 180 aa7.17□□□□□ -1.26
PTPRN-205ENST00000440552 LCE2BO14633 110 aa7.16□□□□□ -1.26
PTPRN-205ENST00000440552 C3orf79P0CE67 100 aa7.16□□□□□ -1.26
PTPRN-205ENST00000440552 hADV29S1A0JD25 119 aa7.15□□□□□ -1.26
PTPRN-205ENST00000440552 HIST1H2BKO60814 126 aa7.15□□□□□ -1.26
PTPRN-205ENST00000440552 HIST1H2BJP06899 126 aa7.15□□□□□ -1.26
PTPRN-205ENST00000440552 HIST1H2BOP23527 126 aa7.15□□□□□ -1.26
PTPRN-205ENST00000440552 HIST1H2BBP33778 126 aa7.15□□□□□ -1.26
PTPRN-205ENST00000440552 HIST1H2BDP58876 126 aa7.15□□□□□ -1.26
PTPRN-205ENST00000440552 HIST1H2BCP62807 126 aa7.15□□□□□ -1.26
PTPRN-205ENST00000440552 HIST2H2BEQ16778 126 aa7.15□□□□□ -1.26
PTPRN-205ENST00000440552 ANKRD39Q53RE8 183 aa7.15□□□□□ -1.26
PTPRN-205ENST00000440552 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.15□□□□□ -1.26
PTPRN-205ENST00000440552 HIST1H2BHQ93079 126 aa7.15□□□□□ -1.26
PTPRN-205ENST00000440552 HIST1H2BNQ99877 126 aa7.15□□□□□ -1.26
PTPRN-205ENST00000440552 HIST1H2BMQ99879 126 aa7.15□□□□□ -1.26
PTPRN-205ENST00000440552 PPDPFLQ8WWR9 84 aa7.14□□□□□ -1.27
PTPRN-205ENST00000440552 KRTAP9-3Q9BYQ3 159 aa7.13□□□□□ -1.27
PTPRN-205ENST00000440552 MACF1Q9UPN3 7388 aaKnown RBP7.12□□□□□ -1.27
PTPRN-205ENST00000440552 SYNE2Q8WXH0 6885 aaKnown RBP7.12□□□□□ -1.27
PTPRN-205ENST00000440552 MT1FP04733 61 aa7.12□□□□□ -1.27
PTPRN-205ENST00000440552 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.12□□□□□ -1.27
PTPRN-205ENST00000440552 SS18L2Q9UHA2 77 aa7.12□□□□□ -1.27
PTPRN-205ENST00000440552 SCGB1D1O95968 90 aa7.11□□□□□ -1.27
PTPRN-205ENST00000440552 KRTDAPP60985 99 aa7.1□□□□□ -1.27
PTPRN-205ENST00000440552 SNHG12Q9BXW3 62 aa7.09□□□□□ -1.27
PTPRN-205ENST00000440552 H3BUT2 72 aa7.07□□□□□ -1.28
PTPRN-205ENST00000440552 KRTAP10-10P60014 251 aa7.07□□□□□ -1.28
PTPRN-205ENST00000440552 COA6Q5JTJ3 125 aaKnown RBP7.07□□□□□ -1.28
PTPRN-205ENST00000440552 FAM236DA0A1B0GTK5 79 aa7.06□□□□□ -1.28
PTPRN-205ENST00000440552 FAM236CP0DP71 79 aa7.06□□□□□ -1.28
PTPRN-205ENST00000440552 MPLKIPQ8TAP9 179 aa7.06□□□□□ -1.28
PTPRN-205ENST00000440552 TEN1Q86WV5 123 aa7.05□□□□□ -1.28
PTPRN-205ENST00000440552 ATOH7Q8N100 152 aa7.05□□□□□ -1.28
PTPRN-205ENST00000440552 SNRPEP62304 92 aaKnown RBP7.04□□□□□ -1.28
PTPRN-205ENST00000440552 LINC00846Q9NV44 126 aa7.04□□□□□ -1.28
PTPRN-205ENST00000440552 KRTAP16-1A8MUX0 517 aa7.03□□□□□ -1.28
PTPRN-205ENST00000440552 BVES-AS1Q5T3Y7 98 aa7.03□□□□□ -1.28
PTPRN-205ENST00000440552 RBM12B-AS1Q9P1G2 102 aa7.03□□□□□ -1.28
PTPRN-205ENST00000440552 DSCR10P59022 87 aa7.02□□□□□ -1.29
PTPRN-205ENST00000440552 HRES1P13985 223 aa7.01□□□□□ -1.29
PTPRN-205ENST00000440552 A0A087WSZ3 146 aa7□□□□□ -1.29
PTPRN-205ENST00000440552 KRTAP19-6Q3LI70 58 aa7□□□□□ -1.29
PTPRN-205ENST00000440552 C12orf57Q99622 126 aa6.98□□□□□ -1.29
PTPRN-205ENST00000440552 LINC00313P59037 77 aa6.97□□□□□ -1.29
PTPRN-205ENST00000440552 NDUFV3P56181 108 aaKnown RBP6.96□□□□□ -1.3
PTPRN-205ENST00000440552 NOTCH2NLQ7Z3S9 236 aa6.95□□□□□ -1.3
PTPRN-205ENST00000440552 SIGMAR1Q99720 223 aa6.95□□□□□ -1.3
PTPRN-205ENST00000440552 SNCGO76070 127 aa6.94□□□□□ -1.3
PTPRN-205ENST00000440552 H0YGX0 51 aa6.91□□□□□ -1.3
PTPRN-205ENST00000440552 H3BMG7 143 aa6.91□□□□□ -1.3
PTPRN-205ENST00000440552 A0A1W2PNM2 257 aa6.9□□□□□ -1.3
PTPRN-205ENST00000440552 HSBP1L1C9JCN9 74 aa6.9□□□□□ -1.3
PTPRN-205ENST00000440552 MTURNQ8N3F0 131 aa6.9□□□□□ -1.3
PTPRN-205ENST00000440552 GHRHP01286 108 aa6.89□□□□□ -1.31
PTPRN-205ENST00000440552 IGKV4-1P06312 121 aa6.89□□□□□ -1.31
PTPRN-205ENST00000440552 KRTAP6-3Q3LI67 103 aa6.89□□□□□ -1.31
PTPRN-205ENST00000440552 FAM218AQ96MZ4 157 aa6.88□□□□□ -1.31
PTPRN-205ENST00000440552 HIST1H4GQ99525 98 aa6.88□□□□□ -1.31
PTPRN-205ENST00000440552 A0A1B0GX51 115 aa6.86□□□□□ -1.31
PTPRN-205ENST00000440552 TRBV7-4A0A0J9YYF1 115 aa6.85□□□□□ -1.31
PTPRN-205ENST00000440552 FABP2P12104 132 aa6.84□□□□□ -1.31
PTPRN-205ENST00000440552 LINC00472Q9H8W2 130 aa6.84□□□□□ -1.31
PTPRN-205ENST00000440552 A8MWP4 228 aa6.83□□□□□ -1.32
PTPRN-205ENST00000440552 RAB37Q96AX2 223 aa6.83□□□□□ -1.32
PTPRN-205ENST00000440552 IGHV6-1A0A0B4J1U7 121 aa6.81□□□□□ -1.32
PTPRN-205ENST00000440552 A0A0B4J2C4 111 aa6.81□□□□□ -1.32
PTPRN-205ENST00000440552 ANKRD29Q8N6D5 301 aa6.81□□□□□ -1.32
PTPRN-205ENST00000440552 HIST1H2BLQ99880 126 aa6.81□□□□□ -1.32
PTPRN-205ENST00000440552 COX8AP10176 69 aa6.8□□□□□ -1.32
PTPRN-205ENST00000440552 HIST3H2BBQ8N257 126 aa6.8□□□□□ -1.32
PTPRN-205ENST00000440552 C8orf87E5RJ46 101 aa6.79□□□□□ -1.32
PTPRN-205ENST00000440552 DLEU1O43261 78 aa6.79□□□□□ -1.32
PTPRN-205ENST00000440552 SPINK7P58062 85 aa6.79□□□□□ -1.32
PTPRN-205ENST00000440552 ZCCHC13Q8WW36 166 aaKnown RBP6.79□□□□□ -1.32
PTPRN-205ENST00000440552 NEBP20929 6669 aa6.79□□□□□ -1.32
PTPRN-205ENST00000440552 DEFB116Q30KQ4 102 aa6.78□□□□□ -1.32
PTPRN-205ENST00000440552 S100A2P29034 98 aa6.77□□□□□ -1.33
PTPRN-205ENST00000440552 TMA7Q9Y2S6 64 aaKnown RBP6.77□□□□□ -1.33
PTPRN-205ENST00000440552 H3BQ85 93 aa6.76□□□□□ -1.33
PTPRN-205ENST00000440552 A0A1B0GVX0 72 aa6.75□□□□□ -1.33
PTPRN-205ENST00000440552 Q8N9P0 234 aaPredicted RBP6.74□□□□□ -1.33
PTPRN-205ENST00000440552 HIGD1BQ9P298 99 aa6.74□□□□□ -1.33
PTPRN-205ENST00000440552 TRACP01848 142 aa6.73□□□□□ -1.33
PTPRN-205ENST00000440552 CCKP06307 115 aa6.73□□□□□ -1.33
PTPRN-205ENST00000440552 LOC105371267A0A1B0GV96 52 aa6.72□□□□□ -1.33
PTPRN-205ENST00000440552 ORMDL1Q9P0S3 153 aa6.72□□□□□ -1.33
PTPRN-205ENST00000440552 PRO1854Q9UHT4 67 aa6.72□□□□□ -1.33
PTPRN-205ENST00000440552 S100A6P06703 90 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms