RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 PRR26Q8N8Z3 221 aa10.9□□□□□ -0.66
HDAC6-208ENST00000438518 ANAPC11Q9NYG5 84 aa10.9□□□□□ -0.66
HDAC6-208ENST00000438518 Q8N377 158 aa10.89□□□□□ -0.67
HDAC6-208ENST00000438518 FABP2P12104 132 aa10.88□□□□□ -0.67
HDAC6-208ENST00000438518 KRTAP10-8P60410 259 aa10.88□□□□□ -0.67
HDAC6-208ENST00000438518 ORMDL1Q9P0S3 153 aa10.88□□□□□ -0.67
HDAC6-208ENST00000438518 FLG2Q5D862 2391 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-208ENST00000438518 TCL1BO95988 128 aa10.87□□□□□ -0.67
HDAC6-208ENST00000438518 TYMSOSQ8TAI1 123 aa10.87□□□□□ -0.67
HDAC6-208ENST00000438518 J3QL48 77 aa10.85□□□□□ -0.67
HDAC6-208ENST00000438518 KRTAP13-2Q52LG2 175 aa10.85□□□□□ -0.67
HDAC6-208ENST00000438518 TMEM256-PLSCR3K7ERE1 68 aa10.84□□□□□ -0.67
HDAC6-208ENST00000438518 MT1HL1P0DM35 61 aa10.84□□□□□ -0.67
HDAC6-208ENST00000438518 SSBP3-AS1Q7Z2R9 100 aa10.84□□□□□ -0.67
HDAC6-208ENST00000438518 SMIM29Q86T20 159 aa10.84□□□□□ -0.67
HDAC6-208ENST00000438518 Q8NBF4 154 aa10.84□□□□□ -0.67
HDAC6-208ENST00000438518 F8WEM9 126 aa10.83□□□□□ -0.68
HDAC6-208ENST00000438518 IGLV9-49A0A0B4J1Y8 123 aa10.82□□□□□ -0.68
HDAC6-208ENST00000438518 C3orf22Q8N5N4 141 aa10.82□□□□□ -0.68
HDAC6-208ENST00000438518 MOBPQ13875 183 aa10.81□□□□□ -0.68
HDAC6-208ENST00000438518 C9orf153Q5TBE3 101 aa10.81□□□□□ -0.68
HDAC6-208ENST00000438518 SPCS1Q9Y6A9 102 aa10.79□□□□□ -0.68
HDAC6-208ENST00000438518 TNXBP22105 4242 aa10.78□□□□□ -0.68
HDAC6-208ENST00000438518 UBE2V1Q13404 147 aa10.78□□□□□ -0.68
HDAC6-208ENST00000438518 IGLV8-61A0A075B6I0 122 aa10.77□□□□□ -0.69
HDAC6-208ENST00000438518 NDUFV3P56181 108 aaKnown RBP10.77□□□□□ -0.69
HDAC6-208ENST00000438518 SPAG11AQ6PDA7 123 aa10.77□□□□□ -0.69
HDAC6-208ENST00000438518 Q6JHZ5 121 aa10.75□□□□□ -0.69
HDAC6-208ENST00000438518 LINC00304Q8N9R0 145 aa10.75□□□□□ -0.69
HDAC6-208ENST00000438518 BAALC-AS2P0C853 105 aa10.74□□□□□ -0.69
HDAC6-208ENST00000438518 C9JAW5 83 aa10.73□□□□□ -0.69
HDAC6-208ENST00000438518 H3BMG7 143 aa10.73□□□□□ -0.69
HDAC6-208ENST00000438518 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
HDAC6-208ENST00000438518 H3BT86 120 aa10.72□□□□□ -0.69
HDAC6-208ENST00000438518 K7EP34 96 aa10.72□□□□□ -0.69
HDAC6-208ENST00000438518 GTF2H5Q6ZYL4 71 aa10.72□□□□□ -0.69
HDAC6-208ENST00000438518 SPINK1P00995 79 aa10.7□□□□□ -0.7
HDAC6-208ENST00000438518 CD164Q04900 197 aa10.7□□□□□ -0.7
HDAC6-208ENST00000438518 ANKRD29Q8N6D5 301 aa10.7□□□□□ -0.7
HDAC6-208ENST00000438518 RPS29P62273 56 aaKnown RBP10.69□□□□□ -0.7
HDAC6-208ENST00000438518 JMJD7-PLA2G4BH0Y9G9 81 aa10.67□□□□□ -0.7
HDAC6-208ENST00000438518 IGFL1Q6UW32 110 aa10.66□□□□□ -0.7
HDAC6-208ENST00000438518 RBM3P98179 157 aaKnown RBP10.64□□□□□ -0.71
HDAC6-208ENST00000438518 LIMD2Q9BT23 127 aa10.62□□□□□ -0.71
HDAC6-208ENST00000438518 DMBT1Q9UGM3 2413 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-208ENST00000438518 C21orf62-AS1Q17RA5 79 aa10.61□□□□□ -0.71
HDAC6-208ENST00000438518 Q6Q795 121 aa10.61□□□□□ -0.71
HDAC6-208ENST00000438518 DSCR8Q96T75 97 aa10.61□□□□□ -0.71
HDAC6-208ENST00000438518 TRBV7-4A0A0J9YYF1 115 aa10.59□□□□□ -0.71
HDAC6-208ENST00000438518 TEN1Q86WV5 123 aa10.59□□□□□ -0.71
HDAC6-208ENST00000438518 F8W1H4 67 aa10.58□□□□□ -0.72
HDAC6-208ENST00000438518 PDE6GP18545 87 aa10.58□□□□□ -0.72
HDAC6-208ENST00000438518 Q5XG85 94 aa10.58□□□□□ -0.72
HDAC6-208ENST00000438518 MTURNQ8N3F0 131 aa10.58□□□□□ -0.72
HDAC6-208ENST00000438518 PRO0461Q9UI25 63 aa10.58□□□□□ -0.72
HDAC6-208ENST00000438518 OBSCN-AS1Q96MR7 158 aa10.57□□□□□ -0.72
HDAC6-208ENST00000438518 HRCT1Q6UXD1 115 aa10.56□□□□□ -0.72
HDAC6-208ENST00000438518 A0A0G2JQZ4 141 aa10.55□□□□□ -0.72
HDAC6-208ENST00000438518 TRBV7-7A0A0K0K1E9 115 aa10.55□□□□□ -0.72
HDAC6-208ENST00000438518 A0A1B0GV72 72 aa10.55□□□□□ -0.72
HDAC6-208ENST00000438518 LOC110117498A0A087WWA1 95 aa10.54□□□□□ -0.72
HDAC6-208ENST00000438518 SMCPP49901 116 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-208ENST00000438518 CCKP06307 115 aa10.52□□□□□ -0.73
HDAC6-208ENST00000438518 SS18L2Q9UHA2 77 aa10.52□□□□□ -0.73
HDAC6-208ENST00000438518 A0A1B0GW54 56 aa10.51□□□□□ -0.73
HDAC6-208ENST00000438518 A0A1W2PNM2 257 aa10.51□□□□□ -0.73
HDAC6-208ENST00000438518 A0A1B0GV90 55 aa10.49□□□□□ -0.73
HDAC6-208ENST00000438518 ASB16-AS1Q495Z4 193 aa10.49□□□□□ -0.73
HDAC6-208ENST00000438518 Q6ZQT0 140 aa10.49□□□□□ -0.73
HDAC6-208ENST00000438518 C14orf132Q9NPU4 83 aa10.48□□□□□ -0.73
HDAC6-208ENST00000438518 HERC1Q15751 4861 aa10.47□□□□□ -0.73
HDAC6-208ENST00000438518 FP248Q71RG6 208 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-208ENST00000438518 A0A087WSZ3 146 aa10.45□□□□□ -0.74
HDAC6-208ENST00000438518 VPS25Q9BRG1 176 aa10.45□□□□□ -0.74
HDAC6-208ENST00000438518 ETDBQ3ZM63 59 aa10.4□□□□□ -0.74
HDAC6-208ENST00000438518 RETNLBQ9BQ08 111 aa10.4□□□□□ -0.74
HDAC6-208ENST00000438518 PRR4Q16378 134 aa10.39□□□□□ -0.75
HDAC6-208ENST00000438518 C1orf195Q5TG92 126 aa10.38□□□□□ -0.75
HDAC6-208ENST00000438518 IGLV7-46A0A075B6I9 117 aa10.34□□□□□ -0.75
HDAC6-208ENST00000438518 HMCN2Q8NDA2 5059 aa10.33□□□□□ -0.76
HDAC6-208ENST00000438518 TPRXLQ17RH7 258 aa10.3□□□□□ -0.76
HDAC6-208ENST00000438518 Q96NJ1 140 aa10.29□□□□□ -0.76
HDAC6-208ENST00000438518 LINC00472Q9H8W2 130 aa10.29□□□□□ -0.76
HDAC6-208ENST00000438518 J3KT08 172 aa10.27□□□□□ -0.77
HDAC6-208ENST00000438518 NREPQ16612 68 aa10.26□□□□□ -0.77
HDAC6-208ENST00000438518 IGKV4-1P06312 121 aa10.22□□□□□ -0.77
HDAC6-208ENST00000438518 ACYP1P07311 99 aa10.22□□□□□ -0.77
HDAC6-208ENST00000438518 KRTAP13-3Q3SY46 172 aa10.22□□□□□ -0.77
HDAC6-208ENST00000438518 FAM240AA0A1B0GVK7 77 aa10.21□□□□□ -0.77
HDAC6-208ENST00000438518 SIGMAR1Q99720 223 aa10.21□□□□□ -0.77
HDAC6-208ENST00000438518 UBL5Q9BZL1 73 aa10.21□□□□□ -0.77
HDAC6-208ENST00000438518 Q6ZVQ6 151 aa10.18□□□□□ -0.78
HDAC6-208ENST00000438518 LINC00846Q9NV44 126 aa10.18□□□□□ -0.78
HDAC6-208ENST00000438518 CDIP1Q9H305 208 aa10.17□□□□□ -0.78
HDAC6-208ENST00000438518 J3QR89 54 aa10.16□□□□□ -0.78
HDAC6-208ENST00000438518 DEFB116Q30KQ4 102 aa10.16□□□□□ -0.78
HDAC6-208ENST00000438518 NDUFB1O75438 58 aa10.15□□□□□ -0.78
HDAC6-208ENST00000438518 LPAP08519 4548 aa10.14□□□□□ -0.79
HDAC6-208ENST00000438518 A8MWP4 228 aa10.12□□□□□ -0.79
HDAC6-208ENST00000438518 BPY2O14599 106 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms