RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 PPDPFLQ8WWR9 84 aa7.33□□□□□ -1.24
LINC00339-204ENST00000434233 ANAPC11Q9NYG5 84 aa7.33□□□□□ -1.24
LINC00339-204ENST00000434233 H3BQ85 93 aa7.32□□□□□ -1.24
LINC00339-204ENST00000434233 DNAL4O96015 105 aa7.32□□□□□ -1.24
LINC00339-204ENST00000434233 CRYGAP11844 174 aa7.32□□□□□ -1.24
LINC00339-204ENST00000434233 KRTAP29-1A8MX34 341 aaPredicted RBP7.3□□□□□ -1.24
LINC00339-204ENST00000434233 ORMDL1Q9P0S3 153 aa7.3□□□□□ -1.24
LINC00339-204ENST00000434233 LAMTOR3Q9UHA4 124 aa7.3□□□□□ -1.24
LINC00339-204ENST00000434233 A0A087X002 238 aa7.29□□□□□ -1.24
LINC00339-204ENST00000434233 KRTAP10-8P60410 259 aa7.29□□□□□ -1.24
LINC00339-204ENST00000434233 SMIM29Q86T20 159 aa7.29□□□□□ -1.24
LINC00339-204ENST00000434233 PRR26Q8N8Z3 221 aa7.29□□□□□ -1.24
LINC00339-204ENST00000434233 TMEM256-PLSCR3K7ERE1 68 aa7.28□□□□□ -1.24
LINC00339-204ENST00000434233 H3BS24 57 aa7.27□□□□□ -1.25
LINC00339-204ENST00000434233 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
LINC00339-204ENST00000434233 SPCS1Q9Y6A9 102 aa7.27□□□□□ -1.25
LINC00339-204ENST00000434233 BAALC-AS2P0C853 105 aa7.26□□□□□ -1.25
LINC00339-204ENST00000434233 SSBP3-AS1Q7Z2R9 100 aa7.26□□□□□ -1.25
LINC00339-204ENST00000434233 C3orf22Q8N5N4 141 aa7.26□□□□□ -1.25
LINC00339-204ENST00000434233 TYMSOSQ8TAI1 123 aa7.26□□□□□ -1.25
LINC00339-204ENST00000434233 FLG2Q5D862 2391 aaPredicted RBP7.26□□□□□ -1.25
LINC00339-204ENST00000434233 IGLV9-49A0A0B4J1Y8 123 aa7.25□□□□□ -1.25
LINC00339-204ENST00000434233 FAT3Q8TDW7 4589 aa7.24□□□□□ -1.25
LINC00339-204ENST00000434233 H3BMG7 143 aa7.24□□□□□ -1.25
LINC00339-204ENST00000434233 NDUFV3P56181 108 aaKnown RBP7.24□□□□□ -1.25
LINC00339-204ENST00000434233 UBE2V1Q13404 147 aa7.24□□□□□ -1.25
LINC00339-204ENST00000434233 K7EP34 96 aa7.23□□□□□ -1.25
LINC00339-204ENST00000434233 MT1HL1P0DM35 61 aa7.23□□□□□ -1.25
LINC00339-204ENST00000434233 GTF2H5Q6ZYL4 71 aa7.23□□□□□ -1.25
LINC00339-204ENST00000434233 LRP1Q07954 4544 aaKnown RBP7.22□□□□□ -1.25
LINC00339-204ENST00000434233 IGLV8-61A0A075B6I0 122 aa7.22□□□□□ -1.25
LINC00339-204ENST00000434233 C9JAW5 83 aa7.22□□□□□ -1.25
LINC00339-204ENST00000434233 F8WEM9 126 aa7.22□□□□□ -1.25
LINC00339-204ENST00000434233 MOBPQ13875 183 aa7.22□□□□□ -1.25
LINC00339-204ENST00000434233 C9orf153Q5TBE3 101 aa7.22□□□□□ -1.25
LINC00339-204ENST00000434233 Q8NBF4 154 aa7.22□□□□□ -1.25
LINC00339-204ENST00000434233 ABCA13Q86UQ4 5058 aa7.22□□□□□ -1.25
LINC00339-204ENST00000434233 H3BT86 120 aa7.2□□□□□ -1.26
LINC00339-204ENST00000434233 LCE2BO14633 110 aa7.19□□□□□ -1.26
LINC00339-204ENST00000434233 Q6JHZ5 121 aa7.19□□□□□ -1.26
LINC00339-204ENST00000434233 ANKRD29Q8N6D5 301 aa7.19□□□□□ -1.26
LINC00339-204ENST00000434233 SPAG11AQ6PDA7 123 aa7.18□□□□□ -1.26
LINC00339-204ENST00000434233 JMJD7-PLA2G4BH0Y9G9 81 aa7.16□□□□□ -1.26
LINC00339-204ENST00000434233 LINC00304Q8N9R0 145 aa7.16□□□□□ -1.26
LINC00339-204ENST00000434233 PRO0461Q9UI25 63 aa7.16□□□□□ -1.26
LINC00339-204ENST00000434233 RBM3P98179 157 aaKnown RBP7.15□□□□□ -1.26
LINC00339-204ENST00000434233 IGFL1Q6UW32 110 aa7.15□□□□□ -1.26
LINC00339-204ENST00000434233 MTURNQ8N3F0 131 aa7.15□□□□□ -1.26
LINC00339-204ENST00000434233 TNXBP22105 4242 aa7.15□□□□□ -1.26
LINC00339-204ENST00000434233 A0A1B0GV90 55 aa7.14□□□□□ -1.27
LINC00339-204ENST00000434233 F8W1H4 67 aa7.14□□□□□ -1.27
LINC00339-204ENST00000434233 CD164Q04900 197 aa7.14□□□□□ -1.27
LINC00339-204ENST00000434233 MYCBP2O75592 4640 aa7.14□□□□□ -1.27
LINC00339-204ENST00000434233 SPINK1P00995 79 aa7.13□□□□□ -1.27
LINC00339-204ENST00000434233 A0A0G2JQZ4 141 aa7.12□□□□□ -1.27
LINC00339-204ENST00000434233 OBSCN-AS1Q96MR7 158 aa7.12□□□□□ -1.27
LINC00339-204ENST00000434233 DSCR8Q96T75 97 aa7.12□□□□□ -1.27
LINC00339-204ENST00000434233 TRBV7-4A0A0J9YYF1 115 aa7.11□□□□□ -1.27
LINC00339-204ENST00000434233 RPS29P62273 56 aaKnown RBP7.11□□□□□ -1.27
LINC00339-204ENST00000434233 Q6Q795 121 aa7.11□□□□□ -1.27
LINC00339-204ENST00000434233 HRCT1Q6UXD1 115 aa7.1□□□□□ -1.27
LINC00339-204ENST00000434233 TEN1Q86WV5 123 aa7.1□□□□□ -1.27
LINC00339-204ENST00000434233 A0A1B0GV72 72 aa7.09□□□□□ -1.27
LINC00339-204ENST00000434233 PDE6GP18545 87 aa7.09□□□□□ -1.27
LINC00339-204ENST00000434233 DMBT1Q9UGM3 2413 aaPredicted RBP7.08□□□□□ -1.28
LINC00339-204ENST00000434233 A0A1W2PNM2 257 aa7.08□□□□□ -1.28
LINC00339-204ENST00000434233 LOC110117498A0A087WWA1 95 aa7.07□□□□□ -1.28
LINC00339-204ENST00000434233 TRBV7-7A0A0K0K1E9 115 aa7.06□□□□□ -1.28
LINC00339-204ENST00000434233 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
LINC00339-204ENST00000434233 Q5XG85 94 aa7.06□□□□□ -1.28
LINC00339-204ENST00000434233 Q6ZQT0 140 aa7.06□□□□□ -1.28
LINC00339-204ENST00000434233 C14orf132Q9NPU4 83 aa7.06□□□□□ -1.28
LINC00339-204ENST00000434233 PCLOQ9Y6V0 5065 aa7.06□□□□□ -1.28
LINC00339-204ENST00000434233 CCKP06307 115 aa7.05□□□□□ -1.28
LINC00339-204ENST00000434233 LIMD2Q9BT23 127 aa7.05□□□□□ -1.28
LINC00339-204ENST00000434233 A0A1B0GW54 56 aa7.03□□□□□ -1.28
LINC00339-204ENST00000434233 ETDBQ3ZM63 59 aa7.03□□□□□ -1.28
LINC00339-204ENST00000434233 VPS25Q9BRG1 176 aa7.02□□□□□ -1.29
LINC00339-204ENST00000434233 ASB16-AS1Q495Z4 193 aa7.01□□□□□ -1.29
LINC00339-204ENST00000434233 A0A087WSZ3 146 aa7□□□□□ -1.29
LINC00339-204ENST00000434233 LCE2AQ5TA79 106 aaPredicted RBP7□□□□□ -1.29
LINC00339-204ENST00000434233 SS18L2Q9UHA2 77 aa7□□□□□ -1.29
LINC00339-204ENST00000434233 C1orf195Q5TG92 126 aa6.96□□□□□ -1.3
LINC00339-204ENST00000434233 FP248Q71RG6 208 aaPredicted RBP6.95□□□□□ -1.3
LINC00339-204ENST00000434233 RETNLBQ9BQ08 111 aa6.95□□□□□ -1.3
LINC00339-204ENST00000434233 PRR4Q16378 134 aa6.92□□□□□ -1.3
LINC00339-204ENST00000434233 LINC00472Q9H8W2 130 aa6.92□□□□□ -1.3
LINC00339-204ENST00000434233 Q96NJ1 140 aa6.91□□□□□ -1.3
LINC00339-204ENST00000434233 IGLV7-46A0A075B6I9 117 aa6.9□□□□□ -1.3
LINC00339-204ENST00000434233 NREPQ16612 68 aa6.9□□□□□ -1.3
LINC00339-204ENST00000434233 ACYP1P07311 99 aa6.87□□□□□ -1.31
LINC00339-204ENST00000434233 J3KT08 172 aa6.86□□□□□ -1.31
LINC00339-204ENST00000434233 IGKV4-1P06312 121 aa6.86□□□□□ -1.31
LINC00339-204ENST00000434233 LINC00846Q9NV44 126 aa6.86□□□□□ -1.31
LINC00339-204ENST00000434233 FAM240AA0A1B0GVK7 77 aa6.85□□□□□ -1.31
LINC00339-204ENST00000434233 DEFB116Q30KQ4 102 aa6.85□□□□□ -1.31
LINC00339-204ENST00000434233 UBL5Q9BZL1 73 aa6.85□□□□□ -1.31
LINC00339-204ENST00000434233 Q6ZVQ6 151 aa6.84□□□□□ -1.31
LINC00339-204ENST00000434233 J3QR89 54 aa6.83□□□□□ -1.32
LINC00339-204ENST00000434233 LORP23490 312 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms