RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 LITAFQ99732 161 aa4.38□□□□□ -1.71
CDH13-203ENST00000431540 H0Y8G0 127 aa4.37□□□□□ -1.71
CDH13-203ENST00000431540 SERF1AO75920 110 aa4.37□□□□□ -1.71
CDH13-203ENST00000431540 IFITM1P13164 125 aa4.37□□□□□ -1.71
CDH13-203ENST00000431540 C6orf99Q4VX62 202 aa4.37□□□□□ -1.71
CDH13-203ENST00000431540 HRCT1Q6UXD1 115 aa4.37□□□□□ -1.71
CDH13-203ENST00000431540 FLGP20930 4061 aaPredicted RBP4.36□□□□□ -1.71
CDH13-203ENST00000431540 TRGC2P03986 189 aa4.36□□□□□ -1.71
CDH13-203ENST00000431540 LOC105371267A0A1B0GV96 52 aa4.35□□□□□ -1.71
CDH13-203ENST00000431540 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
CDH13-203ENST00000431540 Q1RN00 199 aa4.35□□□□□ -1.71
CDH13-203ENST00000431540 Q6JHZ5 121 aa4.35□□□□□ -1.71
CDH13-203ENST00000431540 ATP11AUNQ6ZP68 121 aa4.35□□□□□ -1.71
CDH13-203ENST00000431540 Q75L30 129 aa4.35□□□□□ -1.71
CDH13-203ENST00000431540 FABP4P15090 132 aa4.34□□□□□ -1.71
CDH13-203ENST00000431540 DEFB105AQ8NG35 78 aa4.34□□□□□ -1.71
CDH13-203ENST00000431540 SYS1-DBNDD2H3BUS1 97 aa4.33□□□□□ -1.72
CDH13-203ENST00000431540 NPC2P61916 151 aa4.33□□□□□ -1.72
CDH13-203ENST00000431540 LINC01545Q5VT33 79 aa4.33□□□□□ -1.72
CDH13-203ENST00000431540 PET117Q6UWS5 81 aa4.33□□□□□ -1.72
CDH13-203ENST00000431540 TRAV13-2A0A0B4J235 113 aa4.32□□□□□ -1.72
CDH13-203ENST00000431540 C20orf202A1L168 122 aa4.32□□□□□ -1.72
CDH13-203ENST00000431540 VAMP3Q15836 100 aa4.32□□□□□ -1.72
CDH13-203ENST00000431540 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
CDH13-203ENST00000431540 PPDPFLQ8WWR9 84 aa4.32□□□□□ -1.72
CDH13-203ENST00000431540 F8WEM9 126 aa4.31□□□□□ -1.72
CDH13-203ENST00000431540 PMCHL2Q9BQD1 86 aa4.31□□□□□ -1.72
CDH13-203ENST00000431540 SCGB1D1O95968 90 aa4.3□□□□□ -1.72
CDH13-203ENST00000431540 TRBV20-1A0A075B6N2 111 aa4.28□□□□□ -1.72
CDH13-203ENST00000431540 TRBV7-7A0A0K0K1E9 115 aa4.28□□□□□ -1.72
CDH13-203ENST00000431540 A6NDN8 102 aa4.28□□□□□ -1.72
CDH13-203ENST00000431540 COLCA2A8K830 154 aa4.28□□□□□ -1.72
CDH13-203ENST00000431540 SNRPEP62304 92 aaKnown RBP4.28□□□□□ -1.72
CDH13-203ENST00000431540 OCIAD2Q56VL3 154 aa4.28□□□□□ -1.72
CDH13-203ENST00000431540 SCGB1D4Q6XE38 83 aa4.28□□□□□ -1.72
CDH13-203ENST00000431540 CLEC2BQ92478 149 aa4.28□□□□□ -1.72
CDH13-203ENST00000431540 PCP2Q8IVA1 136 aa4.27□□□□□ -1.73
CDH13-203ENST00000431540 hADV29S1A0JD25 119 aa4.26□□□□□ -1.73
CDH13-203ENST00000431540 Q6Q795 121 aa4.26□□□□□ -1.73
CDH13-203ENST00000431540 LINC00575Q6W349 94 aa4.26□□□□□ -1.73
CDH13-203ENST00000431540 C20orf166-AS1Q96NR2 134 aa4.26□□□□□ -1.73
CDH13-203ENST00000431540 KRTAP4-4Q9BYR3 166 aa4.26□□□□□ -1.73
CDH13-203ENST00000431540 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
CDH13-203ENST00000431540 SS18L2Q9UHA2 77 aa4.26□□□□□ -1.73
CDH13-203ENST00000431540 LST1O00453 97 aa4.25□□□□□ -1.73
CDH13-203ENST00000431540 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.25□□□□□ -1.73
CDH13-203ENST00000431540 MUSTN1Q8IVN3 82 aa4.25□□□□□ -1.73
CDH13-203ENST00000431540 SMIM11BQ8TCY0 68 aa4.25□□□□□ -1.73
CDH13-203ENST00000431540 A8MUU9 505 aa4.24□□□□□ -1.73
CDH13-203ENST00000431540 C21orf62-AS1Q17RA5 79 aa4.24□□□□□ -1.73
CDH13-203ENST00000431540 IGFL1Q6UW32 110 aa4.24□□□□□ -1.73
CDH13-203ENST00000431540 OBSCN-AS1Q96MR7 158 aa4.24□□□□□ -1.73
CDH13-203ENST00000431540 LINC00846Q9NV44 126 aa4.24□□□□□ -1.73
CDH13-203ENST00000431540 HIST1H2BKO60814 126 aa4.23□□□□□ -1.73
CDH13-203ENST00000431540 SNCGO76070 127 aa4.23□□□□□ -1.73
CDH13-203ENST00000431540 HIST1H2BJP06899 126 aa4.23□□□□□ -1.73
CDH13-203ENST00000431540 C3orf79P0CE67 100 aa4.23□□□□□ -1.73
CDH13-203ENST00000431540 HIST1H2BOP23527 126 aa4.23□□□□□ -1.73
CDH13-203ENST00000431540 HIST1H2BBP33778 126 aa4.23□□□□□ -1.73
CDH13-203ENST00000431540 HIST1H2BDP58876 126 aa4.23□□□□□ -1.73
CDH13-203ENST00000431540 HIST1H2BCP62807 126 aa4.23□□□□□ -1.73
CDH13-203ENST00000431540 HIST2H2BEQ16778 126 aa4.23□□□□□ -1.73
CDH13-203ENST00000431540 COA6Q5JTJ3 125 aaKnown RBP4.23□□□□□ -1.73
CDH13-203ENST00000431540 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.23□□□□□ -1.73
CDH13-203ENST00000431540 HIST1H2BHQ93079 126 aa4.23□□□□□ -1.73
CDH13-203ENST00000431540 HIST1H2BNQ99877 126 aa4.23□□□□□ -1.73
CDH13-203ENST00000431540 HIST1H2BMQ99879 126 aa4.23□□□□□ -1.73
CDH13-203ENST00000431540 A0A0G2JQZ4 141 aa4.22□□□□□ -1.73
CDH13-203ENST00000431540 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
CDH13-203ENST00000431540 BVES-AS1Q5T3Y7 98 aa4.22□□□□□ -1.73
CDH13-203ENST00000431540 Q96NJ1 140 aa4.22□□□□□ -1.73
CDH13-203ENST00000431540 Q6ZQY7 126 aa4.21□□□□□ -1.74
CDH13-203ENST00000431540 TEN1Q86WV5 123 aa4.21□□□□□ -1.74
CDH13-203ENST00000431540 SNHG12Q9BXW3 62 aa4.21□□□□□ -1.74
CDH13-203ENST00000431540 TTTY13Q9BZ97 58 aa4.21□□□□□ -1.74
CDH13-203ENST00000431540 C12orf57Q99622 126 aa4.19□□□□□ -1.74
CDH13-203ENST00000431540 RBM12B-AS1Q9P1G2 102 aa4.18□□□□□ -1.74
CDH13-203ENST00000431540 H0YGX0 51 aa4.17□□□□□ -1.74
CDH13-203ENST00000431540 SMIM6P0DI80 62 aa4.17□□□□□ -1.74
CDH13-203ENST00000431540 KRTDAPP60985 99 aa4.17□□□□□ -1.74
CDH13-203ENST00000431540 MTURNQ8N3F0 131 aa4.16□□□□□ -1.74
CDH13-203ENST00000431540 MPLKIPQ8TAP9 179 aa4.16□□□□□ -1.74
CDH13-203ENST00000431540 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
CDH13-203ENST00000431540 A0A1B0GX51 115 aa4.15□□□□□ -1.75
CDH13-203ENST00000431540 PCP4L1A6NKN8 68 aa4.15□□□□□ -1.75
CDH13-203ENST00000431540 H3BQ85 93 aa4.15□□□□□ -1.75
CDH13-203ENST00000431540 MT2AP02795 61 aa4.15□□□□□ -1.75
CDH13-203ENST00000431540 USH2AO75445 5202 aa4.15□□□□□ -1.75
CDH13-203ENST00000431540 LINC00313P59037 77 aa4.14□□□□□ -1.75
CDH13-203ENST00000431540 HSBP1L1C9JCN9 74 aa4.13□□□□□ -1.75
CDH13-203ENST00000431540 NDUFV3P56181 108 aaKnown RBP4.13□□□□□ -1.75
CDH13-203ENST00000431540 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
CDH13-203ENST00000431540 FAM236DA0A1B0GTK5 79 aa4.12□□□□□ -1.75
CDH13-203ENST00000431540 S100A6P06703 90 aa4.12□□□□□ -1.75
CDH13-203ENST00000431540 FAM236CP0DP71 79 aa4.12□□□□□ -1.75
CDH13-203ENST00000431540 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
CDH13-203ENST00000431540 Q8N9P0 234 aaPredicted RBP4.12□□□□□ -1.75
CDH13-203ENST00000431540 A0A087WSZ3 146 aa4.1□□□□□ -1.75
CDH13-203ENST00000431540 TRBV7-4A0A0J9YYF1 115 aa4.1□□□□□ -1.75
CDH13-203ENST00000431540 H3BUT2 72 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms