RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 KRTAP11-1Q8IUC1 163 aa4.58□□□□□ -1.68
COL28A1-202ENST00000430711 C11orf45Q8TAV5 145 aa4.58□□□□□ -1.68
COL28A1-202ENST00000430711 EPM2AB3EWF7 344 aa4.57□□□□□ -1.68
COL28A1-202ENST00000430711 DEFB116Q30KQ4 102 aa4.57□□□□□ -1.68
COL28A1-202ENST00000430711 NKAPP1Q8N9T2 125 aa4.57□□□□□ -1.68
COL28A1-202ENST00000430711 MRAPQ8TCY5 172 aa4.57□□□□□ -1.68
COL28A1-202ENST00000430711 FRAS1Q86XX4 4008 aa4.57□□□□□ -1.68
COL28A1-202ENST00000430711 H3BNG1 76 aa4.57□□□□□ -1.68
COL28A1-202ENST00000430711 OCR1Q9BZK8 76 aa4.57□□□□□ -1.68
COL28A1-202ENST00000430711 IGLV1-50A0A075B6I6 118 aa4.56□□□□□ -1.68
COL28A1-202ENST00000430711 Q6ZRX8 168 aa4.56□□□□□ -1.68
COL28A1-202ENST00000430711 SMIM29Q86T20 159 aa4.56□□□□□ -1.68
COL28A1-202ENST00000430711 HIGD2AQ9BW72 106 aa4.56□□□□□ -1.68
COL28A1-202ENST00000430711 FAM30AQ9NZY2 134 aa4.56□□□□□ -1.68
COL28A1-202ENST00000430711 RYR2Q92736 4967 aa4.56□□□□□ -1.68
COL28A1-202ENST00000430711 DNAH10OSP0CZ25 163 aa4.56□□□□□ -1.68
COL28A1-202ENST00000430711 DYNC2H1Q8NCM8 4307 aaKnown RBP4.55□□□□□ -1.68
COL28A1-202ENST00000430711 IGLV5-48A0A075B6I7 105 aa4.55□□□□□ -1.68
COL28A1-202ENST00000430711 TMEM254Q8TBM7 123 aa4.55□□□□□ -1.68
COL28A1-202ENST00000430711 PCLOQ9Y6V0 5065 aa4.55□□□□□ -1.68
COL28A1-202ENST00000430711 HYDINQ4G0P3 5121 aa4.55□□□□□ -1.68
COL28A1-202ENST00000430711 K7EQZ3 153 aa4.55□□□□□ -1.68
COL28A1-202ENST00000430711 PDE6GP18545 87 aa4.55□□□□□ -1.68
COL28A1-202ENST00000430711 DSCR10P59022 87 aa4.55□□□□□ -1.68
COL28A1-202ENST00000430711 PRLHP81277 87 aa4.55□□□□□ -1.68
COL28A1-202ENST00000430711 SPRR1AP35321 89 aa4.54□□□□□ -1.68
COL28A1-202ENST00000430711 HERC2O95714 4834 aa4.54□□□□□ -1.68
COL28A1-202ENST00000430711 STARD9Q9P2P6 4700 aa4.54□□□□□ -1.68
COL28A1-202ENST00000430711 IGKV2-24A0A0C4DH68 120 aa4.54□□□□□ -1.68
COL28A1-202ENST00000430711 CHTF8P0CG12 524 aa4.54□□□□□ -1.68
COL28A1-202ENST00000430711 C5orf47Q569G3 176 aa4.54□□□□□ -1.68
COL28A1-202ENST00000430711 C1orf137Q5JT78 98 aa4.54□□□□□ -1.68
COL28A1-202ENST00000430711 LINC00336Q6ZUF6 198 aa4.53□□□□□ -1.68
COL28A1-202ENST00000430711 A0A096LNI7 61 aa4.52□□□□□ -1.69
COL28A1-202ENST00000430711 A0A0U1RQV1 116 aa4.52□□□□□ -1.69
COL28A1-202ENST00000430711 FUSP35637 526 aaKnown RBP eCLIP4.52□□□□□ -1.69
COL28A1-202ENST00000430711 UBE2BP63146 152 aa4.52□□□□□ -1.69
COL28A1-202ENST00000430711 MRPL55Q7Z7F7 128 aaKnown RBP4.52□□□□□ -1.69
COL28A1-202ENST00000430711 PLA2G2DQ9UNK4 145 aa4.52□□□□□ -1.69
COL28A1-202ENST00000430711 ETDCA0A1B0GVM5 59 aa4.51□□□□□ -1.69
COL28A1-202ENST00000430711 LRCOL1A6NCL2 159 aa4.51□□□□□ -1.69
COL28A1-202ENST00000430711 TLX1NBP0CAT3 122 aa4.51□□□□□ -1.69
COL28A1-202ENST00000430711 RPL37AP61513 92 aaKnown RBP4.51□□□□□ -1.69
COL28A1-202ENST00000430711 SERP1Q9Y6X1 66 aa4.51□□□□□ -1.69
COL28A1-202ENST00000430711 K7EIL1 84 aa4.51□□□□□ -1.69
COL28A1-202ENST00000430711 Q8NBF4 154 aa4.51□□□□□ -1.69
COL28A1-202ENST00000430711 LINC00476Q8WZB0 136 aa4.51□□□□□ -1.69
COL28A1-202ENST00000430711 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.5□□□□□ -1.69
COL28A1-202ENST00000430711 BCE1O60756 84 aa4.5□□□□□ -1.69
COL28A1-202ENST00000430711 PRR4Q16378 134 aa4.5□□□□□ -1.69
COL28A1-202ENST00000430711 KMT2AQ03164 3969 aa4.5□□□□□ -1.69
COL28A1-202ENST00000430711 DNAH8Q96JB1 4490 aa4.5□□□□□ -1.69
COL28A1-202ENST00000430711 PANO1I0J062 215 aa4.5□□□□□ -1.69
COL28A1-202ENST00000430711 PRYO14603 147 aa4.5□□□□□ -1.69
COL28A1-202ENST00000430711 IGFL1Q6UW32 110 aa4.5□□□□□ -1.69
COL28A1-202ENST00000430711 DNAH2Q9P225 4427 aa4.49□□□□□ -1.69
COL28A1-202ENST00000430711 IGLV5-37A0A075B6J1 123 aa4.49□□□□□ -1.69
COL28A1-202ENST00000430711 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
COL28A1-202ENST00000430711 MPLKIPQ8TAP9 179 aa4.49□□□□□ -1.69
COL28A1-202ENST00000430711 HECTD4Q9Y4D8 3996 aa4.49□□□□□ -1.69
COL28A1-202ENST00000430711 H3BQ85 93 aa4.49□□□□□ -1.69
COL28A1-202ENST00000430711 PHF5AQ7RTV0 110 aaKnown RBP4.48□□□□□ -1.69
COL28A1-202ENST00000430711 WWC2-AS2Q96NR7 200 aa4.48□□□□□ -1.69
COL28A1-202ENST00000430711 SPRR4Q96PI1 79 aa4.48□□□□□ -1.69
COL28A1-202ENST00000430711 REG3GQ6UW15 175 aa4.47□□□□□ -1.69
COL28A1-202ENST00000430711 DHRS4-AS1Q9P1J3 65 aa4.47□□□□□ -1.69
COL28A1-202ENST00000430711 WFDC13Q8IUB5 93 aa4.47□□□□□ -1.69
COL28A1-202ENST00000430711 DNAH17Q9UFH2 4485 aa4.46□□□□□ -1.69
COL28A1-202ENST00000430711 A0A087WSZ3 146 aa4.46□□□□□ -1.69
COL28A1-202ENST00000430711 PSCAO43653 123 aa4.46□□□□□ -1.7
COL28A1-202ENST00000430711 LCE6AA0A183 80 aa4.45□□□□□ -1.7
COL28A1-202ENST00000430711 VPS13DQ5THJ4 4388 aa4.45□□□□□ -1.7
COL28A1-202ENST00000430711 ZCCHC13Q8WW36 166 aaKnown RBP4.45□□□□□ -1.7
COL28A1-202ENST00000430711 SACSQ9NZJ4 4579 aa4.44□□□□□ -1.7
COL28A1-202ENST00000430711 F8WDY8 70 aa4.44□□□□□ -1.7
COL28A1-202ENST00000430711 DNAH6Q9C0G6 4158 aa4.43□□□□□ -1.7
COL28A1-202ENST00000430711 SMIM26A0A096LP01 95 aa4.43□□□□□ -1.7
COL28A1-202ENST00000430711 RYR1P21817 5038 aa4.43□□□□□ -1.7
COL28A1-202ENST00000430711 A8MU10 97 aa4.42□□□□□ -1.7
COL28A1-202ENST00000430711 HCG22E2RYF7 251 aa4.42□□□□□ -1.7
COL28A1-202ENST00000430711 C1orf64Q8NEQ6 169 aa4.42□□□□□ -1.7
COL28A1-202ENST00000430711 NDUFC1O43677 76 aa4.41□□□□□ -1.7
COL28A1-202ENST00000430711 hDV103S1A0JD37 113 aa4.41□□□□□ -1.7
COL28A1-202ENST00000430711 C16orf90A8MZG2 172 aa4.41□□□□□ -1.7
COL28A1-202ENST00000430711 CNBPP62633 177 aaKnown RBP4.41□□□□□ -1.7
COL28A1-202ENST00000430711 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.41□□□□□ -1.7
COL28A1-202ENST00000430711 KRTAP29-1A8MX34 341 aaPredicted RBP4.4□□□□□ -1.71
COL28A1-202ENST00000430711 ALMS1Q8TCU4 4167 aa4.39□□□□□ -1.71
COL28A1-202ENST00000430711 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
COL28A1-202ENST00000430711 ANAPC11Q9NYG5 84 aa4.39□□□□□ -1.71
COL28A1-202ENST00000430711 UBE2AP49459 152 aa4.39□□□□□ -1.71
COL28A1-202ENST00000430711 APLNQ9ULZ1 77 aa4.39□□□□□ -1.71
COL28A1-202ENST00000430711 PKIGQ9Y2B9 76 aa4.39□□□□□ -1.71
COL28A1-202ENST00000430711 IGLV8-61A0A075B6I0 122 aa4.38□□□□□ -1.71
COL28A1-202ENST00000430711 PSPHP1O15172 72 aa4.37□□□□□ -1.71
COL28A1-202ENST00000430711 LINC00208Q96KT6 92 aa4.37□□□□□ -1.71
COL28A1-202ENST00000430711 LINC00472Q9H8W2 130 aa4.37□□□□□ -1.71
COL28A1-202ENST00000430711 ATP5EP56381 51 aaPredicted RBP4.36□□□□□ -1.71
COL28A1-202ENST00000430711 Q6ZRN7 208 aaPredicted RBP4.36□□□□□ -1.71
COL28A1-202ENST00000430711 PRO0628Q9UI54 55 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms