RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 IGLV7-43P04211 117 aa13.43□□□□□ -0.26
VSX1-205ENST00000429762 XGP55808 180 aa13.43□□□□□ -0.26
VSX1-205ENST00000429762 ACYP1P07311 99 aa13.43□□□□□ -0.26
VSX1-205ENST00000429762 LINC00846Q9NV44 126 aa13.42□□□□□ -0.26
VSX1-205ENST00000429762 A0A0G2JQZ4 141 aa13.41□□□□□ -0.26
VSX1-205ENST00000429762 MT-ATP8P03928 68 aa13.4□□□□□ -0.27
VSX1-205ENST00000429762 SPRR4Q96PI1 79 aa13.39□□□□□ -0.27
VSX1-205ENST00000429762 F8WEM9 126 aa13.38□□□□□ -0.27
VSX1-205ENST00000429762 SPRR1BP22528 89 aa13.38□□□□□ -0.27
VSX1-205ENST00000429762 PDE6GP18545 87 aa13.36□□□□□ -0.27
VSX1-205ENST00000429762 ANAPC11Q9NYG5 84 aa13.36□□□□□ -0.27
VSX1-205ENST00000429762 SIGMAR1Q99720 223 aa13.35□□□□□ -0.27
VSX1-205ENST00000429762 APOBP04114 4563 aaKnown RBP13.33□□□□□ -0.28
VSX1-205ENST00000429762 A0A1W2PNM2 257 aa13.32□□□□□ -0.28
VSX1-205ENST00000429762 SMR3BP02814 79 aaPredicted RBP13.31□□□□□ -0.28
VSX1-205ENST00000429762 IGFL1Q6UW32 110 aa13.31□□□□□ -0.28
VSX1-205ENST00000429762 ZNF706Q9Y5V0 76 aaPredicted RBP13.3□□□□□ -0.28
VSX1-205ENST00000429762 VPS13BQ7Z7G8 4022 aa13.3□□□□□ -0.28
VSX1-205ENST00000429762 IGLV9-49A0A0B4J1Y8 123 aa13.29□□□□□ -0.28
VSX1-205ENST00000429762 LINC00483Q53H64 154 aa13.29□□□□□ -0.28
VSX1-205ENST00000429762 IGLV8-61A0A075B6I0 122 aa13.27□□□□□ -0.28
VSX1-205ENST00000429762 LINC00643Q86TS7 51 aa13.25□□□□□ -0.29
VSX1-205ENST00000429762 C9orf153Q5TBE3 101 aa13.25□□□□□ -0.29
VSX1-205ENST00000429762 Q8NBF4 154 aa13.25□□□□□ -0.29
VSX1-205ENST00000429762 IGKV3D-7A0A0C4DH55 119 aa13.23□□□□□ -0.29
VSX1-205ENST00000429762 UBL5Q9BZL1 73 aa13.22□□□□□ -0.29
VSX1-205ENST00000429762 RPL37AP61513 92 aaKnown RBP13.21□□□□□ -0.29
VSX1-205ENST00000429762 Q6ZVQ6 151 aa13.21□□□□□ -0.29
VSX1-205ENST00000429762 MOBPQ13875 183 aa13.19□□□□□ -0.3
VSX1-205ENST00000429762 C21orf62-AS1Q17RA5 79 aa13.17□□□□□ -0.3
VSX1-205ENST00000429762 Q6JHZ5 121 aa13.17□□□□□ -0.3
VSX1-205ENST00000429762 FAT1Q14517 4588 aa13.15□□□□□ -0.3
VSX1-205ENST00000429762 CRYGAP11844 174 aa13.14□□□□□ -0.31
VSX1-205ENST00000429762 HRCT1Q6UXD1 115 aa13.12□□□□□ -0.31
VSX1-205ENST00000429762 A0A087WSZ3 146 aa13.11□□□□□ -0.31
VSX1-205ENST00000429762 TRBV7-7A0A0K0K1E9 115 aa13.11□□□□□ -0.31
VSX1-205ENST00000429762 NREPQ16612 68 aa13.11□□□□□ -0.31
VSX1-205ENST00000429762 A0A087X002 238 aa13.09□□□□□ -0.31
VSX1-205ENST00000429762 KRTAP1-4P0C5Y4 121 aa13.07□□□□□ -0.32
VSX1-205ENST00000429762 KRTAP10-4P60372 401 aaPredicted RBP13.06□□□□□ -0.32
VSX1-205ENST00000429762 A0A1B0GW54 56 aa13.05□□□□□ -0.32
VSX1-205ENST00000429762 KRTAP13-2Q52LG2 175 aa13.04□□□□□ -0.32
VSX1-205ENST00000429762 ATP5EP2Q5VTU8 51 aa13.04□□□□□ -0.32
VSX1-205ENST00000429762 A0A087WVE0 104 aa13.03□□□□□ -0.32
VSX1-205ENST00000429762 Q6Q795 121 aa13.03□□□□□ -0.32
VSX1-205ENST00000429762 HIST1H4AP62805 103 aaKnown RBP13.03□□□□□ -0.32
VSX1-205ENST00000429762 SPINK6Q6UWN8 80 aa13.03□□□□□ -0.32
VSX1-205ENST00000429762 EPPK1P58107 5090 aaKnown RBP13.02□□□□□ -0.33
VSX1-205ENST00000429762 DEFB116Q30KQ4 102 aa13.01□□□□□ -0.33
VSX1-205ENST00000429762 HSPG2P98160 4391 aa13□□□□□ -0.33
VSX1-205ENST00000429762 Q8N9L7 120 aa13□□□□□ -0.33
VSX1-205ENST00000429762 IMUPQ9GZP8 106 aa13□□□□□ -0.33
VSX1-205ENST00000429762 RYR1P21817 5038 aa12.99□□□□□ -0.33
VSX1-205ENST00000429762 BPY2O14599 106 aa12.99□□□□□ -0.33
VSX1-205ENST00000429762 CXCL6P80162 114 aa12.98□□□□□ -0.33
VSX1-205ENST00000429762 FAM229BQ4G0N7 80 aa12.98□□□□□ -0.33
VSX1-205ENST00000429762 PLA2G1BP04054 148 aaKnown RBP12.98□□□□□ -0.33
VSX1-205ENST00000429762 SCGB1A1P11684 91 aa12.97□□□□□ -0.33
VSX1-205ENST00000429762 FAM236AA0A1B0GUQ0 79 aa12.94□□□□□ -0.34
VSX1-205ENST00000429762 FAM236BA0A1B0GV22 79 aa12.94□□□□□ -0.34
VSX1-205ENST00000429762 CDK2AP2O75956 126 aa12.93□□□□□ -0.34
VSX1-205ENST00000429762 SSBP3-AS1Q7Z2R9 100 aa12.93□□□□□ -0.34
VSX1-205ENST00000429762 PCP4P48539 62 aa12.92□□□□□ -0.34
VSX1-205ENST00000429762 KRTAP17-1Q9BYP8 105 aa12.9□□□□□ -0.34
VSX1-205ENST00000429762 PRR26Q8N8Z3 221 aa12.9□□□□□ -0.34
VSX1-205ENST00000429762 FAM229AH3BQW9 127 aa12.89□□□□□ -0.35
VSX1-205ENST00000429762 DSCR10P59022 87 aa12.89□□□□□ -0.35
VSX1-205ENST00000429762 KIAA1109Q2LD37 5005 aa12.89□□□□□ -0.35
VSX1-205ENST00000429762 IGKV4-1P06312 121 aa12.89□□□□□ -0.35
VSX1-205ENST00000429762 Q5VSD8 79 aa12.89□□□□□ -0.35
VSX1-205ENST00000429762 LINC00472Q9H8W2 130 aa12.87□□□□□ -0.35
VSX1-205ENST00000429762 PKHD1L1Q86WI1 4243 aa12.87□□□□□ -0.35
VSX1-205ENST00000429762 TYMSOSQ8TAI1 123 aa12.86□□□□□ -0.35
VSX1-205ENST00000429762 K7EQZ3 153 aa12.84□□□□□ -0.35
VSX1-205ENST00000429762 Q96NJ1 140 aa12.84□□□□□ -0.35
VSX1-205ENST00000429762 CD164Q04900 197 aa12.81□□□□□ -0.36
VSX1-205ENST00000429762 SS18L2Q9UHA2 77 aa12.81□□□□□ -0.36
VSX1-205ENST00000429762 ANAPC13Q9BS18 74 aa12.77□□□□□ -0.37
VSX1-205ENST00000429762 A8MWP4 228 aa12.71□□□□□ -0.37
VSX1-205ENST00000429762 C4orf48Q5BLP8 95 aa12.71□□□□□ -0.37
VSX1-205ENST00000429762 LINC00304Q8N9R0 145 aa12.7□□□□□ -0.38
VSX1-205ENST00000429762 J3KT08 172 aa12.69□□□□□ -0.38
VSX1-205ENST00000429762 ATOX1O00244 68 aa12.68□□□□□ -0.38
VSX1-205ENST00000429762 PRR15Q8IV56 129 aa12.68□□□□□ -0.38
VSX1-205ENST00000429762 Q8N1X5 172 aa12.67□□□□□ -0.38
VSX1-205ENST00000429762 LRP1Q07954 4544 aaKnown RBP12.66□□□□□ -0.38
VSX1-205ENST00000429762 WFDC13Q8IUB5 93 aa12.65□□□□□ -0.38
VSX1-205ENST00000429762 HCG22E2RYF7 251 aa12.63□□□□□ -0.39
VSX1-205ENST00000429762 ASB16-AS1Q495Z4 193 aa12.63□□□□□ -0.39
VSX1-205ENST00000429762 C1orf195Q5TG92 126 aa12.63□□□□□ -0.39
VSX1-205ENST00000429762 LIMD2Q9BT23 127 aa12.63□□□□□ -0.39
VSX1-205ENST00000429762 SPINK1P00995 79 aa12.62□□□□□ -0.39
VSX1-205ENST00000429762 IGHV6-1A0A0B4J1U7 121 aa12.61□□□□□ -0.39
VSX1-205ENST00000429762 NDUFB1O75438 58 aa12.61□□□□□ -0.39
VSX1-205ENST00000429762 Q5XG85 94 aa12.61□□□□□ -0.39
VSX1-205ENST00000429762 A0A1B0GVX0 72 aa12.59□□□□□ -0.39
VSX1-205ENST00000429762 MMP24-AS1A0A0U1RRL7 71 aa12.57□□□□□ -0.4
VSX1-205ENST00000429762 FAT3Q8TDW7 4589 aa12.57□□□□□ -0.4
VSX1-205ENST00000429762 CCDC179H3BU77 68 aa12.56□□□□□ -0.4
VSX1-205ENST00000429762 NOTCH2NLQ7Z3S9 236 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms