RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 ERC2-IT1O76042 136 aa5.7□□□□□ -1.5
GABPB1-205ENST00000429662 DNAH10OSP0CZ25 163 aa5.7□□□□□ -1.5
GABPB1-205ENST00000429662 KLKP1Q107X0 134 aa5.7□□□□□ -1.5
GABPB1-205ENST00000429662 RMI2Q96E14 147 aa5.7□□□□□ -1.5
GABPB1-205ENST00000429662 DEFB131BA0A096LNP1 70 aa5.69□□□□□ -1.5
GABPB1-205ENST00000429662 M0R2N4 97 aa5.69□□□□□ -1.5
GABPB1-205ENST00000429662 PRYO14603 147 aa5.69□□□□□ -1.5
GABPB1-205ENST00000429662 Q6ZRP5 223 aa5.69□□□□□ -1.5
GABPB1-205ENST00000429662 FAM19A5Q7Z5A7 132 aaPredicted RBP5.69□□□□□ -1.5
GABPB1-205ENST00000429662 C20orf197Q8N268 126 aa5.69□□□□□ -1.5
GABPB1-205ENST00000429662 C11orf45Q8TAV5 145 aa5.69□□□□□ -1.5
GABPB1-205ENST00000429662 DNAH6Q9C0G6 4158 aa5.69□□□□□ -1.5
GABPB1-205ENST00000429662 FAM236DA0A1B0GTK5 79 aa5.68□□□□□ -1.5
GABPB1-205ENST00000429662 FAM236CP0DP71 79 aa5.68□□□□□ -1.5
GABPB1-205ENST00000429662 ATP5EP56381 51 aaPredicted RBP5.68□□□□□ -1.5
GABPB1-205ENST00000429662 NREPQ16612 68 aa5.68□□□□□ -1.5
GABPB1-205ENST00000429662 CYSTM1Q9H1C7 97 aa5.68□□□□□ -1.5
GABPB1-205ENST00000429662 IGLV5-48A0A075B6I7 105 aa5.67□□□□□ -1.5
GABPB1-205ENST00000429662 PKD1P98161 4303 aa5.67□□□□□ -1.5
GABPB1-205ENST00000429662 TRAV10A0A0B4J240 114 aa5.67□□□□□ -1.5
GABPB1-205ENST00000429662 C7orf33Q8WU49 177 aa5.67□□□□□ -1.5
GABPB1-205ENST00000429662 RETNQ9HD89 108 aa5.67□□□□□ -1.5
GABPB1-205ENST00000429662 SERP1Q9Y6X1 66 aa5.67□□□□□ -1.5
GABPB1-205ENST00000429662 DNAH17Q9UFH2 4485 aa5.66□□□□□ -1.5
GABPB1-205ENST00000429662 FUSP35637 526 aaKnown RBP eCLIP5.66□□□□□ -1.5
GABPB1-205ENST00000429662 C5orf47Q569G3 176 aa5.66□□□□□ -1.5
GABPB1-205ENST00000429662 H7BZZ5 65 aa5.65□□□□□ -1.51
GABPB1-205ENST00000429662 BPY2O14599 106 aa5.65□□□□□ -1.51
GABPB1-205ENST00000429662 SPRR1AP35321 89 aa5.65□□□□□ -1.51
GABPB1-205ENST00000429662 IGLV1-50A0A075B6I6 118 aa5.64□□□□□ -1.51
GABPB1-205ENST00000429662 ETDCA0A1B0GVM5 59 aa5.64□□□□□ -1.51
GABPB1-205ENST00000429662 EPM2AB3EWF7 344 aa5.64□□□□□ -1.51
GABPB1-205ENST00000429662 Q6ZRX8 168 aa5.64□□□□□ -1.51
GABPB1-205ENST00000429662 Q8N377 158 aa5.64□□□□□ -1.51
GABPB1-205ENST00000429662 SERTAD4-AS1Q5TG53 156 aa5.63□□□□□ -1.51
GABPB1-205ENST00000429662 KRTAP4-16G5E9R7 235 aaPredicted RBP5.62□□□□□ -1.51
GABPB1-205ENST00000429662 IGKV4-1P06312 121 aa5.62□□□□□ -1.51
GABPB1-205ENST00000429662 SCXQ7RTU7 201 aa5.61□□□□□ -1.51
GABPB1-205ENST00000429662 MRPL55Q7Z7F7 128 aaKnown RBP5.6□□□□□ -1.51
GABPB1-205ENST00000429662 Q8NBF4 154 aa5.6□□□□□ -1.51
GABPB1-205ENST00000429662 DEFB105AQ8NG35 78 aa5.6□□□□□ -1.51
GABPB1-205ENST00000429662 TM2D3Q9BRN9 247 aa5.6□□□□□ -1.51
GABPB1-205ENST00000429662 LINC00588Q9Y4M8 146 aa5.6□□□□□ -1.51
GABPB1-205ENST00000429662 F8WEM9 126 aa5.59□□□□□ -1.51
GABPB1-205ENST00000429662 C1orf137Q5JT78 98 aa5.59□□□□□ -1.51
GABPB1-205ENST00000429662 TMEM254Q8TBM7 123 aa5.59□□□□□ -1.51
GABPB1-205ENST00000429662 LINC00476Q8WZB0 136 aa5.59□□□□□ -1.51
GABPB1-205ENST00000429662 SPRR4Q96PI1 79 aa5.59□□□□□ -1.51
GABPB1-205ENST00000429662 SMIM26A0A096LP01 95 aa5.58□□□□□ -1.52
GABPB1-205ENST00000429662 OXTP01178 125 aa5.58□□□□□ -1.52
GABPB1-205ENST00000429662 OCR1Q9BZK8 76 aa5.58□□□□□ -1.52
GABPB1-205ENST00000429662 SNURFQ9Y675 71 aa5.58□□□□□ -1.52
GABPB1-205ENST00000429662 REG3GQ6UW15 175 aa5.57□□□□□ -1.52
GABPB1-205ENST00000429662 Q9BRP9 147 aa5.57□□□□□ -1.52
GABPB1-205ENST00000429662 APOBP04114 4563 aaKnown RBP5.57□□□□□ -1.52
GABPB1-205ENST00000429662 A0A0U1RQV1 116 aa5.56□□□□□ -1.52
GABPB1-205ENST00000429662 A0A1W2PNM2 257 aa5.56□□□□□ -1.52
GABPB1-205ENST00000429662 RPL37AP8A6NKH3 93 aa5.56□□□□□ -1.52
GABPB1-205ENST00000429662 Q5XG85 94 aa5.56□□□□□ -1.52
GABPB1-205ENST00000429662 PKIGQ9Y2B9 76 aa5.56□□□□□ -1.52
GABPB1-205ENST00000429662 UBE2BP63146 152 aa5.55□□□□□ -1.52
GABPB1-205ENST00000429662 C14orf177Q52M58 125 aa5.55□□□□□ -1.52
GABPB1-205ENST00000429662 LRP1BQ9NZR2 4599 aa5.54□□□□□ -1.52
GABPB1-205ENST00000429662 IGLV8-61A0A075B6I0 122 aa5.54□□□□□ -1.52
GABPB1-205ENST00000429662 FAM168BA1KXE4 195 aa5.54□□□□□ -1.52
GABPB1-205ENST00000429662 KRTAP10-2P60368 255 aa5.54□□□□□ -1.52
GABPB1-205ENST00000429662 CNBPP62633 177 aaKnown RBP5.54□□□□□ -1.52
GABPB1-205ENST00000429662 C16orf90A8MZG2 172 aa5.53□□□□□ -1.52
GABPB1-205ENST00000429662 KRTAP7-1Q8IUC3 87 aa5.53□□□□□ -1.52
GABPB1-205ENST00000429662 Q8N9L7 120 aa5.53□□□□□ -1.52
GABPB1-205ENST00000429662 MYCBP2O75592 4640 aa5.52□□□□□ -1.53
GABPB1-205ENST00000429662 C4orf26Q17RF5 130 aa5.52□□□□□ -1.53
GABPB1-205ENST00000429662 ST20-AS1Q8NBB2 130 aa5.52□□□□□ -1.53
GABPB1-205ENST00000429662 DMBT1Q9UGM3 2413 aaPredicted RBP5.51□□□□□ -1.53
GABPB1-205ENST00000429662 A0A1B0GVY2 172 aa5.51□□□□□ -1.53
GABPB1-205ENST00000429662 H0Y9J4 135 aa5.51□□□□□ -1.53
GABPB1-205ENST00000429662 SMIM29Q86T20 159 aa5.51□□□□□ -1.53
GABPB1-205ENST00000429662 DSCR10P59022 87 aa5.5□□□□□ -1.53
GABPB1-205ENST00000429662 HRCT1Q6UXD1 115 aa5.5□□□□□ -1.53
GABPB1-205ENST00000429662 HCG22E2RYF7 251 aa5.49□□□□□ -1.53
GABPB1-205ENST00000429662 SPRR1BP22528 89 aa5.48□□□□□ -1.53
GABPB1-205ENST00000429662 HIGD2AQ9BW72 106 aa5.48□□□□□ -1.53
GABPB1-205ENST00000429662 PSCAO43653 123 aa5.47□□□□□ -1.53
GABPB1-205ENST00000429662 NDUFB1O75438 58 aa5.47□□□□□ -1.53
GABPB1-205ENST00000429662 LY6G6CO95867 125 aa5.47□□□□□ -1.53
GABPB1-205ENST00000429662 IGFL1Q6UW32 110 aa5.47□□□□□ -1.53
GABPB1-205ENST00000429662 FAM30AQ9NZY2 134 aa5.47□□□□□ -1.53
GABPB1-205ENST00000429662 A0A096LNI7 61 aa5.46□□□□□ -1.54
GABPB1-205ENST00000429662 UBE2AP49459 152 aa5.46□□□□□ -1.54
GABPB1-205ENST00000429662 ZCCHC13Q8WW36 166 aaKnown RBP5.46□□□□□ -1.54
GABPB1-205ENST00000429662 LINC00474Q9P2X8 69 aa5.46□□□□□ -1.54
GABPB1-205ENST00000429662 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.54
GABPB1-205ENST00000429662 H3BPC8 53 aa5.45□□□□□ -1.54
GABPB1-205ENST00000429662 K7EQZ3 153 aa5.45□□□□□ -1.54
GABPB1-205ENST00000429662 FP248Q71RG6 208 aaPredicted RBP5.45□□□□□ -1.54
GABPB1-205ENST00000429662 UBE2DNLQ8IWF7 75 aa5.45□□□□□ -1.54
GABPB1-205ENST00000429662 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.44□□□□□ -1.54
GABPB1-205ENST00000429662 A0A1W2PNN7 141 aa5.44□□□□□ -1.54
GABPB1-205ENST00000429662 DNAH5Q8TE73 4624 aa5.44□□□□□ -1.54
GABPB1-205ENST00000429662 MP68P56378 58 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 201.1 ms