RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 NOTCH1P46531 2555 aa7.24□□□□□ -1.25
LINC01238-203ENST00000429456 IGLV8-61A0A075B6I0 122 aa7.23□□□□□ -1.25
LINC01238-203ENST00000429456 PRLHP81277 87 aa7.23□□□□□ -1.25
LINC01238-203ENST00000429456 IGKV2-24A0A0C4DH68 120 aa7.23□□□□□ -1.25
LINC01238-203ENST00000429456 A0A0G2JQZ4 141 aa7.23□□□□□ -1.25
LINC01238-203ENST00000429456 DNAH10Q8IVF4 4471 aa7.23□□□□□ -1.25
LINC01238-203ENST00000429456 H3BS24 57 aa7.22□□□□□ -1.25
LINC01238-203ENST00000429456 PSCAO43653 123 aa7.2□□□□□ -1.26
LINC01238-203ENST00000429456 PRR15Q8IV56 129 aa7.2□□□□□ -1.26
LINC01238-203ENST00000429456 LINC00474Q9P2X8 69 aa7.2□□□□□ -1.26
LINC01238-203ENST00000429456 HCG22E2RYF7 251 aa7.2□□□□□ -1.26
LINC01238-203ENST00000429456 DNAH9Q9NYC9 4486 aa7.19□□□□□ -1.26
LINC01238-203ENST00000429456 ZCCHC13Q8WW36 166 aaKnown RBP7.19□□□□□ -1.26
LINC01238-203ENST00000429456 A0A087WSZ3 146 aa7.18□□□□□ -1.26
LINC01238-203ENST00000429456 FAM229BQ4G0N7 80 aa7.18□□□□□ -1.26
LINC01238-203ENST00000429456 KRTAP11-1Q8IUC1 163 aa7.18□□□□□ -1.26
LINC01238-203ENST00000429456 UBE2AP49459 152 aa7.17□□□□□ -1.26
LINC01238-203ENST00000429456 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.16□□□□□ -1.26
LINC01238-203ENST00000429456 C14orf177Q52M58 125 aa7.16□□□□□ -1.26
LINC01238-203ENST00000429456 PHF5AQ7RTV0 110 aaKnown RBP7.16□□□□□ -1.26
LINC01238-203ENST00000429456 APLNQ9ULZ1 77 aa7.16□□□□□ -1.26
LINC01238-203ENST00000429456 H0Y9J4 135 aa7.16□□□□□ -1.26
LINC01238-203ENST00000429456 SPRR1BP22528 89 aa7.16□□□□□ -1.26
LINC01238-203ENST00000429456 DEFB116Q30KQ4 102 aa7.16□□□□□ -1.26
LINC01238-203ENST00000429456 CHTF8P0CG12 524 aa7.15□□□□□ -1.26
LINC01238-203ENST00000429456 UBE2DNLQ8IWF7 75 aa7.15□□□□□ -1.26
LINC01238-203ENST00000429456 RBM12B-AS1Q9P1G2 102 aa7.15□□□□□ -1.27
LINC01238-203ENST00000429456 NBEAL1Q6ZS30 2694 aa7.14□□□□□ -1.27
LINC01238-203ENST00000429456 LYSTQ99698 3801 aa7.14□□□□□ -1.27
LINC01238-203ENST00000429456 DYNC2H1Q8NCM8 4307 aaKnown RBP7.14□□□□□ -1.27
LINC01238-203ENST00000429456 WFDC13Q8IUB5 93 aa7.12□□□□□ -1.27
LINC01238-203ENST00000429456 hDV103S1A0JD37 113 aa7.12□□□□□ -1.27
LINC01238-203ENST00000429456 RPL37AP61513 92 aaKnown RBP7.12□□□□□ -1.27
LINC01238-203ENST00000429456 C9orf163Q8N9P6 203 aa7.12□□□□□ -1.27
LINC01238-203ENST00000429456 COL6A5A8TX70 2615 aa7.12□□□□□ -1.27
LINC01238-203ENST00000429456 KRTAP29-1A8MX34 341 aaPredicted RBP7.11□□□□□ -1.27
LINC01238-203ENST00000429456 LRCOL1A6NCL2 159 aa7.1□□□□□ -1.27
LINC01238-203ENST00000429456 MPLKIPQ8TAP9 179 aa7.09□□□□□ -1.27
LINC01238-203ENST00000429456 LINC00472Q9H8W2 130 aa7.09□□□□□ -1.27
LINC01238-203ENST00000429456 C1orf64Q8NEQ6 169 aa7.08□□□□□ -1.28
LINC01238-203ENST00000429456 B9D2Q9BPU9 175 aa7.08□□□□□ -1.28
LINC01238-203ENST00000429456 CYP4F30PQ9H0H9 118 aa7.08□□□□□ -1.28
LINC01238-203ENST00000429456 MP68P56378 58 aa7.07□□□□□ -1.28
LINC01238-203ENST00000429456 A8MWP4 228 aa7.06□□□□□ -1.28
LINC01238-203ENST00000429456 KRTAP13-1Q8IUC0 172 aa7.06□□□□□ -1.28
LINC01238-203ENST00000429456 STAB2Q8WWQ8 2551 aa7.06□□□□□ -1.28
LINC01238-203ENST00000429456 NBDYA0A0U1RRE5 68 aa7.06□□□□□ -1.28
LINC01238-203ENST00000429456 PANO1I0J062 215 aa7.06□□□□□ -1.28
LINC01238-203ENST00000429456 NDUFB1O75438 58 aa7.06□□□□□ -1.28
LINC01238-203ENST00000429456 CASC2Q6XLA1 102 aa7.06□□□□□ -1.28
LINC01238-203ENST00000429456 TRAV22A0A0B4J277 110 aa7.05□□□□□ -1.28
LINC01238-203ENST00000429456 Q6ZRN7 208 aaPredicted RBP7.05□□□□□ -1.28
LINC01238-203ENST00000429456 PRR26Q8N8Z3 221 aa7.05□□□□□ -1.28
LINC01238-203ENST00000429456 PLECQ15149 4684 aaKnown RBP7.05□□□□□ -1.28
LINC01238-203ENST00000429456 DNAH7Q8WXX0 4024 aa7.04□□□□□ -1.28
LINC01238-203ENST00000429456 MGAM2Q2M2H8 2515 aa7.04□□□□□ -1.28
LINC01238-203ENST00000429456 LINC00208Q96KT6 92 aa7.03□□□□□ -1.28
LINC01238-203ENST00000429456 COL7A1Q02388 2944 aa7.02□□□□□ -1.28
LINC01238-203ENST00000429456 H3BPC8 53 aa7.02□□□□□ -1.29
LINC01238-203ENST00000429456 C8orf87E5RJ46 101 aa7.02□□□□□ -1.29
LINC01238-203ENST00000429456 H0Y9P7 68 aa7.02□□□□□ -1.29
LINC01238-203ENST00000429456 PRR4Q16378 134 aa7.02□□□□□ -1.29
LINC01238-203ENST00000429456 Q1T7F1 81 aa7.01□□□□□ -1.29
LINC01238-203ENST00000429456 MDFIQ99750 246 aa7.01□□□□□ -1.29
LINC01238-203ENST00000429456 SRRM2Q9UQ35 2752 aaKnown RBP7□□□□□ -1.29
LINC01238-203ENST00000429456 KTN1-AS1Q86SY8 53 aa7□□□□□ -1.29
LINC01238-203ENST00000429456 SPACA4Q8TDM5 124 aa7□□□□□ -1.29
LINC01238-203ENST00000429456 CSMD3Q7Z407 3707 aa6.99□□□□□ -1.29
LINC01238-203ENST00000429456 MMP24-AS1A0A0U1RRL7 71 aa6.99□□□□□ -1.29
LINC01238-203ENST00000429456 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.99□□□□□ -1.29
LINC01238-203ENST00000429456 NUPR2A6NF83 97 aa6.99□□□□□ -1.29
LINC01238-203ENST00000429456 SPANXA2-OT1Q8N9U9 137 aa6.98□□□□□ -1.29
LINC01238-203ENST00000429456 Q96NJ1 140 aa6.98□□□□□ -1.29
LINC01238-203ENST00000429456 LINC00483Q53H64 154 aa6.97□□□□□ -1.29
LINC01238-203ENST00000429456 IGLV9-49A0A0B4J1Y8 123 aa6.96□□□□□ -1.29
LINC01238-203ENST00000429456 VPS13DQ5THJ4 4388 aa6.96□□□□□ -1.29
LINC01238-203ENST00000429456 ASB16-AS1Q495Z4 193 aa6.95□□□□□ -1.3
LINC01238-203ENST00000429456 A0A087WTM6 91 aa6.93□□□□□ -1.3
LINC01238-203ENST00000429456 TENM2Q9NT68 2774 aa6.92□□□□□ -1.3
LINC01238-203ENST00000429456 MOBPQ13875 183 aa6.92□□□□□ -1.3
LINC01238-203ENST00000429456 ZNF706Q9Y5V0 76 aaPredicted RBP6.92□□□□□ -1.3
LINC01238-203ENST00000429456 WWC2-AS2Q96NR7 200 aa6.91□□□□□ -1.3
LINC01238-203ENST00000429456 STARD9Q9P2P6 4700 aa6.91□□□□□ -1.3
LINC01238-203ENST00000429456 C8orf17Q9NRJ1 99 aa6.91□□□□□ -1.3
LINC01238-203ENST00000429456 IGLV5-52A0A0A0MRZ9 124 aa6.9□□□□□ -1.3
LINC01238-203ENST00000429456 TP53AIP1Q9HCN2 124 aa6.9□□□□□ -1.3
LINC01238-203ENST00000429456 PSORS1C2Q9UIG4 136 aa6.9□□□□□ -1.3
LINC01238-203ENST00000429456 DNAH17Q9UFH2 4485 aa6.9□□□□□ -1.31
LINC01238-203ENST00000429456 DNAH8Q96JB1 4490 aa6.89□□□□□ -1.31
LINC01238-203ENST00000429456 PSPHP1O15172 72 aa6.89□□□□□ -1.31
LINC01238-203ENST00000429456 RTL8CO15255 209 aa6.89□□□□□ -1.31
LINC01238-203ENST00000429456 HECTD4Q9Y4D8 3996 aa6.89□□□□□ -1.31
LINC01238-203ENST00000429456 IGLV7-46A0A075B6I9 117 aa6.88□□□□□ -1.31
LINC01238-203ENST00000429456 A0A1B0GVX0 72 aa6.88□□□□□ -1.31
LINC01238-203ENST00000429456 PLAC8Q9NZF1 115 aa6.88□□□□□ -1.31
LINC01238-203ENST00000429456 ZNF861PO60384 105 aa6.87□□□□□ -1.31
LINC01238-203ENST00000429456 Q6ZR54 194 aa6.87□□□□□ -1.31
LINC01238-203ENST00000429456 NDUFS5O43920 106 aa6.86□□□□□ -1.31
LINC01238-203ENST00000429456 ANAPC11Q9NYG5 84 aa6.86□□□□□ -1.31
LINC01238-203ENST00000429456 PRKDCP78527 4128 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms