RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 LY6G6CO95867 125 aa8.69□□□□□ -1.02
APOBEC3D-202ENST00000427494 C1orf134Q5TEV5 83 aa8.69□□□□□ -1.02
APOBEC3D-202ENST00000427494 DNHD1Q96M86 4753 aa8.68□□□□□ -1.02
APOBEC3D-202ENST00000427494 BCE1O60756 84 aa8.68□□□□□ -1.02
APOBEC3D-202ENST00000427494 SPRR4Q96PI1 79 aa8.68□□□□□ -1.02
APOBEC3D-202ENST00000427494 SS18L2Q9UHA2 77 aa8.68□□□□□ -1.02
APOBEC3D-202ENST00000427494 BPY2O14599 106 aa8.67□□□□□ -1.02
APOBEC3D-202ENST00000427494 IGFL1Q6UW32 110 aa8.66□□□□□ -1.02
APOBEC3D-202ENST00000427494 A0A0G2JQZ4 141 aa8.66□□□□□ -1.02
APOBEC3D-202ENST00000427494 IGLV8-61A0A075B6I0 122 aa8.65□□□□□ -1.02
APOBEC3D-202ENST00000427494 LCE2CQ5TA81 110 aa8.65□□□□□ -1.02
APOBEC3D-202ENST00000427494 Q8N9L7 120 aa8.65□□□□□ -1.02
APOBEC3D-202ENST00000427494 IGLV5-52A0A0A0MRZ9 124 aa8.64□□□□□ -1.03
APOBEC3D-202ENST00000427494 IGKV4-1P06312 121 aa8.64□□□□□ -1.03
APOBEC3D-202ENST00000427494 CRYGAP11844 174 aa8.64□□□□□ -1.03
APOBEC3D-202ENST00000427494 SPRR1BP22528 89 aa8.64□□□□□ -1.03
APOBEC3D-202ENST00000427494 KRTAP21-3Q3LHN1 58 aa8.64□□□□□ -1.03
APOBEC3D-202ENST00000427494 KRTAP13-1Q8IUC0 172 aa8.64□□□□□ -1.03
APOBEC3D-202ENST00000427494 KMT2AQ03164 3969 aa8.62□□□□□ -1.03
APOBEC3D-202ENST00000427494 HECTD4Q9Y4D8 3996 aa8.61□□□□□ -1.03
APOBEC3D-202ENST00000427494 WWC2-AS2Q96NR7 200 aa8.61□□□□□ -1.03
APOBEC3D-202ENST00000427494 FBN3Q75N90 2809 aa8.61□□□□□ -1.03
APOBEC3D-202ENST00000427494 SMIM20Q8N5G0 67 aa8.59□□□□□ -1.03
APOBEC3D-202ENST00000427494 PLAC8Q9NZF1 115 aa8.59□□□□□ -1.03
APOBEC3D-202ENST00000427494 TRAV7A0A075B6U4 112 aa8.59□□□□□ -1.03
APOBEC3D-202ENST00000427494 CYSTM1Q9H1C7 97 aa8.57□□□□□ -1.04
APOBEC3D-202ENST00000427494 DNAH2Q9P225 4427 aa8.57□□□□□ -1.04
APOBEC3D-202ENST00000427494 A0A087WSZ3 146 aa8.57□□□□□ -1.04
APOBEC3D-202ENST00000427494 PSORS1C2Q9UIG4 136 aa8.57□□□□□ -1.04
APOBEC3D-202ENST00000427494 TGP01266 2768 aa8.56□□□□□ -1.04
APOBEC3D-202ENST00000427494 DNAH17Q9UFH2 4485 aa8.55□□□□□ -1.04
APOBEC3D-202ENST00000427494 SRRM2Q9UQ35 2752 aaKnown RBP8.55□□□□□ -1.04
APOBEC3D-202ENST00000427494 DSCR10P59022 87 aa8.54□□□□□ -1.04
APOBEC3D-202ENST00000427494 C20orf197Q8N268 126 aa8.53□□□□□ -1.04
APOBEC3D-202ENST00000427494 DNAH6Q9C0G6 4158 aa8.52□□□□□ -1.05
APOBEC3D-202ENST00000427494 K7EQZ3 153 aa8.52□□□□□ -1.05
APOBEC3D-202ENST00000427494 IGLV9-49A0A0B4J1Y8 123 aa8.51□□□□□ -1.05
APOBEC3D-202ENST00000427494 DEFB116Q30KQ4 102 aa8.51□□□□□ -1.05
APOBEC3D-202ENST00000427494 ZNF706Q9Y5V0 76 aaPredicted RBP8.51□□□□□ -1.05
APOBEC3D-202ENST00000427494 KRTAP10-2P60368 255 aa8.5□□□□□ -1.05
APOBEC3D-202ENST00000427494 LINC00483Q53H64 154 aa8.5□□□□□ -1.05
APOBEC3D-202ENST00000427494 ZNF861PO60384 105 aa8.49□□□□□ -1.05
APOBEC3D-202ENST00000427494 ALMS1Q8TCU4 4167 aa8.49□□□□□ -1.05
APOBEC3D-202ENST00000427494 TMEM258P61165 79 aa8.47□□□□□ -1.05
APOBEC3D-202ENST00000427494 OCR1Q9BZK8 76 aa8.46□□□□□ -1.05
APOBEC3D-202ENST00000427494 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3D-202ENST00000427494 FAM30AQ9NZY2 134 aa8.46□□□□□ -1.06
APOBEC3D-202ENST00000427494 SNURFQ9Y675 71 aa8.45□□□□□ -1.06
APOBEC3D-202ENST00000427494 IGLV7-43P04211 117 aa8.44□□□□□ -1.06
APOBEC3D-202ENST00000427494 RPL37AP61513 92 aaKnown RBP8.44□□□□□ -1.06
APOBEC3D-202ENST00000427494 KLKP1Q107X0 134 aa8.44□□□□□ -1.06
APOBEC3D-202ENST00000427494 ANAPC11Q9NYG5 84 aa8.44□□□□□ -1.06
APOBEC3D-202ENST00000427494 FRAS1Q86XX4 4008 aa8.43□□□□□ -1.06
APOBEC3D-202ENST00000427494 HCG22E2RYF7 251 aa8.43□□□□□ -1.06
APOBEC3D-202ENST00000427494 CIRBP-AS1Q8TBR5 109 aa8.43□□□□□ -1.06
APOBEC3D-202ENST00000427494 MOBPQ13875 183 aa8.42□□□□□ -1.06
APOBEC3D-202ENST00000427494 LINC00472Q9H8W2 130 aa8.42□□□□□ -1.06
APOBEC3D-202ENST00000427494 DNAH8Q96JB1 4490 aa8.41□□□□□ -1.06
APOBEC3D-202ENST00000427494 HRCT1Q6UXD1 115 aa8.41□□□□□ -1.06
APOBEC3D-202ENST00000427494 TMEM254Q8TBM7 123 aa8.41□□□□□ -1.06
APOBEC3D-202ENST00000427494 H7BZZ5 65 aa8.39□□□□□ -1.07
APOBEC3D-202ENST00000427494 KRTAP10-1P60331 282 aa8.39□□□□□ -1.07
APOBEC3D-202ENST00000427494 A8MWP4 228 aa8.38□□□□□ -1.07
APOBEC3D-202ENST00000427494 WFDC13Q8IUB5 93 aa8.38□□□□□ -1.07
APOBEC3D-202ENST00000427494 Q6ZSA8 131 aa8.37□□□□□ -1.07
APOBEC3D-202ENST00000427494 PRR15Q8IV56 129 aa8.37□□□□□ -1.07
APOBEC3D-202ENST00000427494 J3KT08 172 aa8.35□□□□□ -1.07
APOBEC3D-202ENST00000427494 DNAH11Q96DT5 4516 aa8.35□□□□□ -1.07
APOBEC3D-202ENST00000427494 A0A0U1RQV1 116 aa8.35□□□□□ -1.07
APOBEC3D-202ENST00000427494 FAM236DA0A1B0GTK5 79 aa8.35□□□□□ -1.07
APOBEC3D-202ENST00000427494 FAM236CP0DP71 79 aa8.35□□□□□ -1.07
APOBEC3D-202ENST00000427494 NDUFC1O43677 76 aa8.34□□□□□ -1.07
APOBEC3D-202ENST00000427494 Q96NJ1 140 aa8.34□□□□□ -1.07
APOBEC3D-202ENST00000427494 DNAH5Q8TE73 4624 aa8.33□□□□□ -1.08
APOBEC3D-202ENST00000427494 HYDINQ4G0P3 5121 aa8.33□□□□□ -1.08
APOBEC3D-202ENST00000427494 PKD1P98161 4303 aa8.33□□□□□ -1.08
APOBEC3D-202ENST00000427494 LORP23490 312 aaPredicted RBP8.33□□□□□ -1.08
APOBEC3D-202ENST00000427494 KRTAP29-1A8MX34 341 aaPredicted RBP8.32□□□□□ -1.08
APOBEC3D-202ENST00000427494 CASC2Q6XLA1 102 aa8.32□□□□□ -1.08
APOBEC3D-202ENST00000427494 LCE6AA0A183 80 aa8.31□□□□□ -1.08
APOBEC3D-202ENST00000427494 NDUFB1O75438 58 aa8.31□□□□□ -1.08
APOBEC3D-202ENST00000427494 RPS28P62857 69 aaKnown RBP8.3□□□□□ -1.08
APOBEC3D-202ENST00000427494 FAT2Q9NYQ8 4349 aa8.28□□□□□ -1.08
APOBEC3D-202ENST00000427494 MMP24-AS1A0A0U1RRL7 71 aa8.28□□□□□ -1.08
APOBEC3D-202ENST00000427494 C5orf47Q569G3 176 aa8.28□□□□□ -1.08
APOBEC3D-202ENST00000427494 SSBP3-AS1Q7Z2R9 100 aa8.25□□□□□ -1.09
APOBEC3D-202ENST00000427494 FAM229AH3BQW9 127 aa8.24□□□□□ -1.09
APOBEC3D-202ENST00000427494 hDV103S1A0JD37 113 aa8.24□□□□□ -1.09
APOBEC3D-202ENST00000427494 CDK2AP2O75956 126 aa8.24□□□□□ -1.09
APOBEC3D-202ENST00000427494 OXTP01178 125 aa8.23□□□□□ -1.09
APOBEC3D-202ENST00000427494 ATP5EP56381 51 aaPredicted RBP8.23□□□□□ -1.09
APOBEC3D-202ENST00000427494 CD164Q04900 197 aa8.23□□□□□ -1.09
APOBEC3D-202ENST00000427494 A0A1B0GVX0 72 aa8.22□□□□□ -1.09
APOBEC3D-202ENST00000427494 ZCCHC13Q8WW36 166 aaKnown RBP8.22□□□□□ -1.09
APOBEC3D-202ENST00000427494 A0A087X002 238 aa8.22□□□□□ -1.09
APOBEC3D-202ENST00000427494 IGHV6-1A0A0B4J1U7 121 aa8.22□□□□□ -1.09
APOBEC3D-202ENST00000427494 C8orf17Q9NRJ1 99 aa8.22□□□□□ -1.09
APOBEC3D-202ENST00000427494 MP68P56378 58 aa8.21□□□□□ -1.09
APOBEC3D-202ENST00000427494 SERP1Q9Y6X1 66 aa8.21□□□□□ -1.1
APOBEC3D-202ENST00000427494 KRTAP13-2Q52LG2 175 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms