RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 IGLV5-48A0A075B6I7 105 aa10.67□□□□□ -0.7
FN1-208ENST00000426059 C1orf137Q5JT78 98 aa10.67□□□□□ -0.7
FN1-208ENST00000426059 Q6ZSA8 131 aa10.66□□□□□ -0.7
FN1-208ENST00000426059 KRTAP13-1Q8IUC0 172 aa10.66□□□□□ -0.7
FN1-208ENST00000426059 H0Y9J4 135 aa10.66□□□□□ -0.7
FN1-208ENST00000426059 LINC00643Q86TS7 51 aa10.66□□□□□ -0.7
FN1-208ENST00000426059 DSCR8Q96T75 97 aa10.65□□□□□ -0.7
FN1-208ENST00000426059 CCKP06307 115 aa10.65□□□□□ -0.71
FN1-208ENST00000426059 Q6ZQT0 140 aa10.64□□□□□ -0.71
FN1-208ENST00000426059 LINC00336Q6ZUF6 198 aa10.64□□□□□ -0.71
FN1-208ENST00000426059 LRP1BQ9NZR2 4599 aa10.62□□□□□ -0.71
FN1-208ENST00000426059 SMIM29Q86T20 159 aa10.62□□□□□ -0.71
FN1-208ENST00000426059 TRBV7-4A0A0J9YYF1 115 aa10.61□□□□□ -0.71
FN1-208ENST00000426059 LOC110117498A0A087WWA1 95 aa10.6□□□□□ -0.71
FN1-208ENST00000426059 C9orf153Q5TBE3 101 aa10.6□□□□□ -0.71
FN1-208ENST00000426059 LINC00846Q9NV44 126 aa10.6□□□□□ -0.71
FN1-208ENST00000426059 A0A1B0GVY2 172 aa10.6□□□□□ -0.71
FN1-208ENST00000426059 A0A0G2JQZ4 141 aa10.58□□□□□ -0.72
FN1-208ENST00000426059 UQCRQO14949 82 aa10.58□□□□□ -0.72
FN1-208ENST00000426059 RYR3Q15413 4870 aa10.57□□□□□ -0.72
FN1-208ENST00000426059 ZNF861PO60384 105 aa10.55□□□□□ -0.72
FN1-208ENST00000426059 DYNC1H1Q14204 4646 aaKnown RBP10.55□□□□□ -0.72
FN1-208ENST00000426059 IGLV7-43P04211 117 aa10.54□□□□□ -0.72
FN1-208ENST00000426059 ANAPC11Q9NYG5 84 aa10.53□□□□□ -0.72
FN1-208ENST00000426059 PDE6GP18545 87 aa10.52□□□□□ -0.73
FN1-208ENST00000426059 F8WEM9 126 aa10.52□□□□□ -0.73
FN1-208ENST00000426059 COX7CP15954 63 aa10.52□□□□□ -0.73
FN1-208ENST00000426059 SPRR4Q96PI1 79 aa10.51□□□□□ -0.73
FN1-208ENST00000426059 SPRR1BP22528 89 aa10.51□□□□□ -0.73
FN1-208ENST00000426059 VPS13BQ7Z7G8 4022 aa10.49□□□□□ -0.73
FN1-208ENST00000426059 A0A1W2PNM2 257 aa10.49□□□□□ -0.73
FN1-208ENST00000426059 HIST1H4AP62805 103 aaKnown RBP10.48□□□□□ -0.73
FN1-208ENST00000426059 ATOX1O00244 68 aa10.48□□□□□ -0.73
FN1-208ENST00000426059 IGFL1Q6UW32 110 aa10.48□□□□□ -0.73
FN1-208ENST00000426059 IGLV9-49A0A0B4J1Y8 123 aa10.46□□□□□ -0.73
FN1-208ENST00000426059 CRYGAP11844 174 aa10.46□□□□□ -0.73
FN1-208ENST00000426059 SMR3BP02814 79 aaPredicted RBP10.46□□□□□ -0.74
FN1-208ENST00000426059 IGKV3D-7A0A0C4DH55 119 aa10.45□□□□□ -0.74
FN1-208ENST00000426059 UBL5Q9BZL1 73 aa10.44□□□□□ -0.74
FN1-208ENST00000426059 J3KT08 172 aa10.43□□□□□ -0.74
FN1-208ENST00000426059 IGLV8-61A0A075B6I0 122 aa10.43□□□□□ -0.74
FN1-208ENST00000426059 LINC00483Q53H64 154 aa10.43□□□□□ -0.74
FN1-208ENST00000426059 Q6ZVQ6 151 aa10.43□□□□□ -0.74
FN1-208ENST00000426059 Q8NBF4 154 aa10.43□□□□□ -0.74
FN1-208ENST00000426059 ZNF706Q9Y5V0 76 aaPredicted RBP10.43□□□□□ -0.74
FN1-208ENST00000426059 Q6JHZ5 121 aa10.42□□□□□ -0.74
FN1-208ENST00000426059 APOBP04114 4563 aaKnown RBP10.42□□□□□ -0.74
FN1-208ENST00000426059 A0A087WVE0 104 aa10.38□□□□□ -0.75
FN1-208ENST00000426059 SERP2Q8N6R1 65 aa10.38□□□□□ -0.75
FN1-208ENST00000426059 CYSTM1Q9H1C7 97 aa10.38□□□□□ -0.75
FN1-208ENST00000426059 RPS28P62857 69 aaKnown RBP10.37□□□□□ -0.75
FN1-208ENST00000426059 MOBPQ13875 183 aa10.37□□□□□ -0.75
FN1-208ENST00000426059 FAT1Q14517 4588 aa10.36□□□□□ -0.75
FN1-208ENST00000426059 RPL37AP61513 92 aaKnown RBP10.34□□□□□ -0.75
FN1-208ENST00000426059 NREPQ16612 68 aa10.34□□□□□ -0.75
FN1-208ENST00000426059 A0A087WSZ3 146 aa10.33□□□□□ -0.76
FN1-208ENST00000426059 HRCT1Q6UXD1 115 aa10.33□□□□□ -0.76
FN1-208ENST00000426059 TMEM258P61165 79 aa10.33□□□□□ -0.76
FN1-208ENST00000426059 C5orf47Q569G3 176 aa10.3□□□□□ -0.76
FN1-208ENST00000426059 A0A087X002 238 aa10.3□□□□□ -0.76
FN1-208ENST00000426059 DEFB116Q30KQ4 102 aa10.28□□□□□ -0.76
FN1-208ENST00000426059 A0A1B0GW54 56 aa10.28□□□□□ -0.76
FN1-208ENST00000426059 Q8N9L7 120 aa10.27□□□□□ -0.77
FN1-208ENST00000426059 KRTAP1-4P0C5Y4 121 aa10.26□□□□□ -0.77
FN1-208ENST00000426059 ATP5EP2Q5VTU8 51 aa10.26□□□□□ -0.77
FN1-208ENST00000426059 KRTAP13-2Q52LG2 175 aa10.24□□□□□ -0.77
FN1-208ENST00000426059 BPY2O14599 106 aa10.24□□□□□ -0.77
FN1-208ENST00000426059 KRTAP10-4P60372 401 aaPredicted RBP10.23□□□□□ -0.77
FN1-208ENST00000426059 CXCL6P80162 114 aa10.23□□□□□ -0.77
FN1-208ENST00000426059 PLA2G1BP04054 148 aaKnown RBP10.21□□□□□ -0.77
FN1-208ENST00000426059 OXTP01178 125 aa10.21□□□□□ -0.78
FN1-208ENST00000426059 SPINK6Q6UWN8 80 aa10.21□□□□□ -0.78
FN1-208ENST00000426059 EPPK1P58107 5090 aaKnown RBP10.2□□□□□ -0.78
FN1-208ENST00000426059 HSPG2P98160 4391 aa10.18□□□□□ -0.78
FN1-208ENST00000426059 DSCR10P59022 87 aa10.17□□□□□ -0.78
FN1-208ENST00000426059 FAM229BQ4G0N7 80 aa10.16□□□□□ -0.78
FN1-208ENST00000426059 SSBP3-AS1Q7Z2R9 100 aa10.16□□□□□ -0.78
FN1-208ENST00000426059 IGKV4-1P06312 121 aa10.15□□□□□ -0.78
FN1-208ENST00000426059 C20orf197Q8N268 126 aa10.14□□□□□ -0.79
FN1-208ENST00000426059 K7EQZ3 153 aa10.14□□□□□ -0.79
FN1-208ENST00000426059 LINC00472Q9H8W2 130 aa10.14□□□□□ -0.79
FN1-208ENST00000426059 PRR26Q8N8Z3 221 aa10.13□□□□□ -0.79
FN1-208ENST00000426059 KIAA1109Q2LD37 5005 aa10.13□□□□□ -0.79
FN1-208ENST00000426059 C4orf26Q17RF5 130 aa10.12□□□□□ -0.79
FN1-208ENST00000426059 KRTAP17-1Q9BYP8 105 aa10.12□□□□□ -0.79
FN1-208ENST00000426059 Q5XG85 94 aa10.11□□□□□ -0.79
FN1-208ENST00000426059 RYR1P21817 5038 aa10.11□□□□□ -0.79
FN1-208ENST00000426059 CDK2AP2O75956 126 aa10.11□□□□□ -0.79
FN1-208ENST00000426059 Q96NJ1 140 aa10.1□□□□□ -0.79
FN1-208ENST00000426059 FAM229AH3BQW9 127 aa10.1□□□□□ -0.79
FN1-208ENST00000426059 TYMSOSQ8TAI1 123 aa10.1□□□□□ -0.79
FN1-208ENST00000426059 Q5VSD8 79 aa10.09□□□□□ -0.79
FN1-208ENST00000426059 FAM236DA0A1B0GTK5 79 aa10.08□□□□□ -0.8
FN1-208ENST00000426059 FAM236CP0DP71 79 aa10.08□□□□□ -0.8
FN1-208ENST00000426059 TRAV7A0A075B6U4 112 aa10.08□□□□□ -0.8
FN1-208ENST00000426059 CD164Q04900 197 aa10.06□□□□□ -0.8
FN1-208ENST00000426059 H7BZZ5 65 aa10.04□□□□□ -0.8
FN1-208ENST00000426059 KLKP1Q107X0 134 aa10.02□□□□□ -0.81
FN1-208ENST00000426059 SERP1Q9Y6X1 66 aa10.02□□□□□ -0.81
FN1-208ENST00000426059 A8MWP4 228 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms