RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 LORP23490 312 aaPredicted RBP9.73□□□□□ -0.85
SHOX2-202ENST00000425436 Q8N1X5 172 aa9.73□□□□□ -0.85
SHOX2-202ENST00000425436 IMUPQ9GZP8 106 aa9.72□□□□□ -0.85
SHOX2-202ENST00000425436 Q6ZQT0 140 aa9.71□□□□□ -0.86
SHOX2-202ENST00000425436 KRTAP4-5Q9BYR2 181 aa9.71□□□□□ -0.86
SHOX2-202ENST00000425436 EPM2AB3EWF7 344 aa9.7□□□□□ -0.86
SHOX2-202ENST00000425436 UBE2BP63146 152 aa9.7□□□□□ -0.86
SHOX2-202ENST00000425436 Q5VSD8 79 aa9.7□□□□□ -0.86
SHOX2-202ENST00000425436 PHF5AQ7RTV0 110 aaKnown RBP9.7□□□□□ -0.86
SHOX2-202ENST00000425436 Q9BRP9 147 aa9.7□□□□□ -0.86
SHOX2-202ENST00000425436 H0Y9J4 135 aa9.69□□□□□ -0.86
SHOX2-202ENST00000425436 FAM229AH3BQW9 127 aa9.69□□□□□ -0.86
SHOX2-202ENST00000425436 VPS13BQ7Z7G8 4022 aa9.68□□□□□ -0.86
SHOX2-202ENST00000425436 A0A1B0GV72 72 aa9.68□□□□□ -0.86
SHOX2-202ENST00000425436 IGLV5-48A0A075B6I7 105 aa9.67□□□□□ -0.86
SHOX2-202ENST00000425436 TRBV7-4A0A0J9YYF1 115 aa9.67□□□□□ -0.86
SHOX2-202ENST00000425436 TRBV7-7A0A0K0K1E9 115 aa9.67□□□□□ -0.86
SHOX2-202ENST00000425436 LINC00846Q9NV44 126 aa9.67□□□□□ -0.86
SHOX2-202ENST00000425436 SRRM2Q9UQ35 2752 aaKnown RBP9.67□□□□□ -0.86
SHOX2-202ENST00000425436 FAM19A1Q7Z5A9 133 aa9.66□□□□□ -0.86
SHOX2-202ENST00000425436 Q8N377 158 aa9.66□□□□□ -0.86
SHOX2-202ENST00000425436 DEFB105AQ8NG35 78 aa9.66□□□□□ -0.86
SHOX2-202ENST00000425436 SMCR5Q8TEV8 140 aa9.66□□□□□ -0.86
SHOX2-202ENST00000425436 UBL5Q9BZL1 73 aa9.66□□□□□ -0.86
SHOX2-202ENST00000425436 LINC01547P58512 204 aaPredicted RBP9.64□□□□□ -0.87
SHOX2-202ENST00000425436 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
SHOX2-202ENST00000425436 A0A1B0GW54 56 aa9.63□□□□□ -0.87
SHOX2-202ENST00000425436 ATP5EP2Q5VTU8 51 aa9.63□□□□□ -0.87
SHOX2-202ENST00000425436 Q6JHZ5 121 aa9.63□□□□□ -0.87
SHOX2-202ENST00000425436 KRTAP11-1Q8IUC1 163 aa9.63□□□□□ -0.87
SHOX2-202ENST00000425436 PLA2G1BP04054 148 aaKnown RBP9.62□□□□□ -0.87
SHOX2-202ENST00000425436 KRTAP10-4P60372 401 aaPredicted RBP9.61□□□□□ -0.87
SHOX2-202ENST00000425436 BCE1O60756 84 aa9.6□□□□□ -0.87
SHOX2-202ENST00000425436 ERC2-IT1O76042 136 aa9.59□□□□□ -0.87
SHOX2-202ENST00000425436 UBE2AP49459 152 aa9.59□□□□□ -0.87
SHOX2-202ENST00000425436 C4orf48Q5BLP8 95 aa9.59□□□□□ -0.87
SHOX2-202ENST00000425436 PSORS1C2Q9UIG4 136 aa9.59□□□□□ -0.87
SHOX2-202ENST00000425436 ABCA13Q86UQ4 5058 aa9.59□□□□□ -0.87
SHOX2-202ENST00000425436 LOC100996750A0A140TA64 210 aa9.58□□□□□ -0.88
SHOX2-202ENST00000425436 ST20-AS1Q8NBB2 130 aa9.58□□□□□ -0.88
SHOX2-202ENST00000425436 KRTAP4-6Q9BYQ5 205 aa9.58□□□□□ -0.88
SHOX2-202ENST00000425436 PRLHP81277 87 aa9.57□□□□□ -0.88
SHOX2-202ENST00000425436 F8WEM9 126 aa9.56□□□□□ -0.88
SHOX2-202ENST00000425436 HIGD2AQ9BW72 106 aa9.56□□□□□ -0.88
SHOX2-202ENST00000425436 C1orf137Q5JT78 98 aa9.55□□□□□ -0.88
SHOX2-202ENST00000425436 SPRR1BP22528 89 aa9.54□□□□□ -0.88
SHOX2-202ENST00000425436 PCLOQ9Y6V0 5065 aa9.52□□□□□ -0.89
SHOX2-202ENST00000425436 Q6ZVQ6 151 aa9.51□□□□□ -0.89
SHOX2-202ENST00000425436 SMIM29Q86T20 159 aa9.51□□□□□ -0.89
SHOX2-202ENST00000425436 PKHD1L1Q86WI1 4243 aa9.51□□□□□ -0.89
SHOX2-202ENST00000425436 IGLV8-61A0A075B6I0 122 aa9.51□□□□□ -0.89
SHOX2-202ENST00000425436 IGKV3D-7A0A0C4DH55 119 aa9.51□□□□□ -0.89
SHOX2-202ENST00000425436 KRTAP13-1Q8IUC0 172 aa9.51□□□□□ -0.89
SHOX2-202ENST00000425436 CXCL6P80162 114 aa9.5□□□□□ -0.89
SHOX2-202ENST00000425436 C3orf22Q8N5N4 141 aa9.5□□□□□ -0.89
SHOX2-202ENST00000425436 ANAPC13Q9BS18 74 aa9.49□□□□□ -0.89
SHOX2-202ENST00000425436 IGLV7-43P04211 117 aa9.48□□□□□ -0.89
SHOX2-202ENST00000425436 NREPQ16612 68 aa9.48□□□□□ -0.89
SHOX2-202ENST00000425436 Q8NBF4 154 aa9.48□□□□□ -0.89
SHOX2-202ENST00000425436 SPRR4Q96PI1 79 aa9.47□□□□□ -0.89
SHOX2-202ENST00000425436 ZNF706Q9Y5V0 76 aaPredicted RBP9.47□□□□□ -0.89
SHOX2-202ENST00000425436 FLG2Q5D862 2391 aaPredicted RBP9.47□□□□□ -0.89
SHOX2-202ENST00000425436 FAM236AA0A1B0GUQ0 79 aa9.46□□□□□ -0.9
SHOX2-202ENST00000425436 FAM236BA0A1B0GV22 79 aa9.46□□□□□ -0.9
SHOX2-202ENST00000425436 A0A1W2PNM2 257 aa9.45□□□□□ -0.9
SHOX2-202ENST00000425436 CRYGAP11844 174 aa9.44□□□□□ -0.9
SHOX2-202ENST00000425436 HIST1H4AP62805 103 aaKnown RBP9.44□□□□□ -0.9
SHOX2-202ENST00000425436 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
SHOX2-202ENST00000425436 MYCBP2O75592 4640 aa9.43□□□□□ -0.9
SHOX2-202ENST00000425436 ZNF861PO60384 105 aa9.42□□□□□ -0.9
SHOX2-202ENST00000425436 ATOX1O00244 68 aa9.41□□□□□ -0.9
SHOX2-202ENST00000425436 IGFL1Q6UW32 110 aa9.41□□□□□ -0.9
SHOX2-202ENST00000425436 LINC00483Q53H64 154 aa9.4□□□□□ -0.91
SHOX2-202ENST00000425436 LRP1Q07954 4544 aaKnown RBP9.4□□□□□ -0.91
SHOX2-202ENST00000425436 BPY2O14599 106 aa9.38□□□□□ -0.91
SHOX2-202ENST00000425436 FAT3Q8TDW7 4589 aa9.36□□□□□ -0.91
SHOX2-202ENST00000425436 A0A087WVE0 104 aa9.35□□□□□ -0.91
SHOX2-202ENST00000425436 SMIM20Q8N5G0 67 aa9.31□□□□□ -0.92
SHOX2-202ENST00000425436 KRTAP29-1A8MX34 341 aaPredicted RBP9.3□□□□□ -0.92
SHOX2-202ENST00000425436 OXTP01178 125 aa9.29□□□□□ -0.92
SHOX2-202ENST00000425436 A0A087WSZ3 146 aa9.28□□□□□ -0.92
SHOX2-202ENST00000425436 UQCRQO14949 82 aa9.28□□□□□ -0.92
SHOX2-202ENST00000425436 C9orf153Q5TBE3 101 aa9.28□□□□□ -0.92
SHOX2-202ENST00000425436 KRTAP1-4P0C5Y4 121 aa9.27□□□□□ -0.93
SHOX2-202ENST00000425436 COX7CP15954 63 aa9.27□□□□□ -0.93
SHOX2-202ENST00000425436 SERP2Q8N6R1 65 aa9.27□□□□□ -0.93
SHOX2-202ENST00000425436 ANAPC11Q9NYG5 84 aa9.27□□□□□ -0.93
SHOX2-202ENST00000425436 IGLV9-49A0A0B4J1Y8 123 aa9.26□□□□□ -0.93
SHOX2-202ENST00000425436 A0A0G2JQZ4 141 aa9.25□□□□□ -0.93
SHOX2-202ENST00000425436 IGKV4-1P06312 121 aa9.25□□□□□ -0.93
SHOX2-202ENST00000425436 PRR26Q8N8Z3 221 aa9.24□□□□□ -0.93
SHOX2-202ENST00000425436 MT1HL1P0DM35 61 aa9.23□□□□□ -0.93
SHOX2-202ENST00000425436 TNXBP22105 4242 aa9.23□□□□□ -0.93
SHOX2-202ENST00000425436 CCDC179H3BU77 68 aa9.22□□□□□ -0.93
SHOX2-202ENST00000425436 SS18L2Q9UHA2 77 aa9.22□□□□□ -0.93
SHOX2-202ENST00000425436 J3KT08 172 aa9.21□□□□□ -0.93
SHOX2-202ENST00000425436 TRAV7A0A075B6U4 112 aa9.21□□□□□ -0.94
SHOX2-202ENST00000425436 DSCR10P59022 87 aa9.21□□□□□ -0.94
SHOX2-202ENST00000425436 KRTAP10-8P60410 259 aa9.21□□□□□ -0.94
SHOX2-202ENST00000425436 SSBP3-AS1Q7Z2R9 100 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms