RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 IGLV5-48A0A075B6I7 105 aa6.29□□□□□ -1.4
MDC1-205ENST00000425072 SPINK6Q6UWN8 80 aa6.29□□□□□ -1.4
MDC1-205ENST00000425072 PRO0461Q9UI25 63 aa6.28□□□□□ -1.4
MDC1-205ENST00000425072 DMBT1Q9UGM3 2413 aaPredicted RBP6.28□□□□□ -1.4
MDC1-205ENST00000425072 JMJD7-PLA2G4BH0Y9G9 81 aa6.27□□□□□ -1.41
MDC1-205ENST00000425072 SPRR1BP22528 89 aa6.27□□□□□ -1.41
MDC1-205ENST00000425072 GAGE2AQ6NT46 116 aa6.27□□□□□ -1.41
MDC1-205ENST00000425072 Q8N377 158 aa6.27□□□□□ -1.41
MDC1-205ENST00000425072 ST20-AS1Q8NBB2 130 aa6.27□□□□□ -1.41
MDC1-205ENST00000425072 LAMTOR3Q9UHA4 124 aa6.27□□□□□ -1.41
MDC1-205ENST00000425072 DYNC1H1Q14204 4646 aaKnown RBP6.26□□□□□ -1.41
MDC1-205ENST00000425072 NDUFV3P56181 108 aaKnown RBP6.26□□□□□ -1.41
MDC1-205ENST00000425072 SPRR4Q96PI1 79 aa6.26□□□□□ -1.41
MDC1-205ENST00000425072 HSPG2P98160 4391 aa6.26□□□□□ -1.41
MDC1-205ENST00000425072 LRP1BQ9NZR2 4599 aa6.25□□□□□ -1.41
MDC1-205ENST00000425072 LINC01547P58512 204 aaPredicted RBP6.25□□□□□ -1.41
MDC1-205ENST00000425072 MTURNQ8N3F0 131 aa6.25□□□□□ -1.41
MDC1-205ENST00000425072 F8WEM9 126 aa6.24□□□□□ -1.41
MDC1-205ENST00000425072 RBM3P98179 157 aaKnown RBP6.24□□□□□ -1.41
MDC1-205ENST00000425072 PDE6GP18545 87 aa6.23□□□□□ -1.41
MDC1-205ENST00000425072 LINC00483Q53H64 154 aa6.23□□□□□ -1.41
MDC1-205ENST00000425072 TEN1Q86WV5 123 aa6.23□□□□□ -1.41
MDC1-205ENST00000425072 SRRM2Q9UQ35 2752 aaKnown RBP6.22□□□□□ -1.41
MDC1-205ENST00000425072 ETDBQ3ZM63 59 aa6.22□□□□□ -1.41
MDC1-205ENST00000425072 FAM229BQ4G0N7 80 aa6.22□□□□□ -1.41
MDC1-205ENST00000425072 Q8N1X5 172 aa6.22□□□□□ -1.41
MDC1-205ENST00000425072 DSCR8Q96T75 97 aa6.22□□□□□ -1.41
MDC1-205ENST00000425072 Q5VSD8 79 aa6.21□□□□□ -1.42
MDC1-205ENST00000425072 SMIM29Q86T20 159 aa6.21□□□□□ -1.42
MDC1-205ENST00000425072 KRTAP10-4P60372 401 aaPredicted RBP6.2□□□□□ -1.42
MDC1-205ENST00000425072 OBSCN-AS1Q96MR7 158 aa6.2□□□□□ -1.42
MDC1-205ENST00000425072 CRYGAP11844 174 aa6.19□□□□□ -1.42
MDC1-205ENST00000425072 Q6JHZ5 121 aa6.19□□□□□ -1.42
MDC1-205ENST00000425072 SSBP3-AS1Q7Z2R9 100 aa6.19□□□□□ -1.42
MDC1-205ENST00000425072 CDIP1Q9H305 208 aa6.19□□□□□ -1.42
MDC1-205ENST00000425072 IGLV8-61A0A075B6I0 122 aa6.18□□□□□ -1.42
MDC1-205ENST00000425072 J3QR89 54 aa6.17□□□□□ -1.42
MDC1-205ENST00000425072 C3orf22Q8N5N4 141 aa6.17□□□□□ -1.42
MDC1-205ENST00000425072 ANAPC11Q9NYG5 84 aa6.16□□□□□ -1.42
MDC1-205ENST00000425072 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.42
MDC1-205ENST00000425072 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.42
MDC1-205ENST00000425072 IGLV9-49A0A0B4J1Y8 123 aa6.15□□□□□ -1.42
MDC1-205ENST00000425072 A0A1B0GW54 56 aa6.15□□□□□ -1.42
MDC1-205ENST00000425072 C9orf153Q5TBE3 101 aa6.15□□□□□ -1.42
MDC1-205ENST00000425072 TRBV7-4A0A0J9YYF1 115 aa6.14□□□□□ -1.43
MDC1-205ENST00000425072 CCKP06307 115 aa6.14□□□□□ -1.43
MDC1-205ENST00000425072 KRTAP1-4P0C5Y4 121 aa6.14□□□□□ -1.43
MDC1-205ENST00000425072 Q8NBF4 154 aa6.14□□□□□ -1.43
MDC1-205ENST00000425072 C14orf132Q9NPU4 83 aa6.14□□□□□ -1.43
MDC1-205ENST00000425072 VPS13BQ7Z7G8 4022 aa6.13□□□□□ -1.43
MDC1-205ENST00000425072 A0A1B0GV72 72 aa6.12□□□□□ -1.43
MDC1-205ENST00000425072 ACYP1P07311 99 aa6.12□□□□□ -1.43
MDC1-205ENST00000425072 MOBPQ13875 183 aa6.12□□□□□ -1.43
MDC1-205ENST00000425072 Q6ZQT0 140 aa6.12□□□□□ -1.43
MDC1-205ENST00000425072 TYMSOSQ8TAI1 123 aa6.12□□□□□ -1.43
MDC1-205ENST00000425072 K7ERU9 68 aa6.11□□□□□ -1.43
MDC1-205ENST00000425072 IGFL1Q6UW32 110 aa6.11□□□□□ -1.43
MDC1-205ENST00000425072 A0A087X002 238 aa6.1□□□□□ -1.43
MDC1-205ENST00000425072 CD164Q04900 197 aa6.1□□□□□ -1.43
MDC1-205ENST00000425072 VPS25Q9BRG1 176 aa6.1□□□□□ -1.43
MDC1-205ENST00000425072 SPAG11AQ6PDA7 123 aa6.09□□□□□ -1.43
MDC1-205ENST00000425072 Q6Q795 121 aa6.09□□□□□ -1.43
MDC1-205ENST00000425072 KRTAP13-2Q52LG2 175 aa6.08□□□□□ -1.44
MDC1-205ENST00000425072 PRR26Q8N8Z3 221 aa6.08□□□□□ -1.44
MDC1-205ENST00000425072 FAT1Q14517 4588 aa6.07□□□□□ -1.44
MDC1-205ENST00000425072 FAM240AA0A1B0GVK7 77 aa6.07□□□□□ -1.44
MDC1-205ENST00000425072 A0A1W2PNM2 257 aa6.07□□□□□ -1.44
MDC1-205ENST00000425072 OXTP01178 125 aa6.06□□□□□ -1.44
MDC1-205ENST00000425072 A0A0G2JQZ4 141 aa6.04□□□□□ -1.44
MDC1-205ENST00000425072 SPINK1P00995 79 aa6.04□□□□□ -1.44
MDC1-205ENST00000425072 KRTAP10-8P60410 259 aa6.04□□□□□ -1.44
MDC1-205ENST00000425072 SS18L2Q9UHA2 77 aa6.04□□□□□ -1.44
MDC1-205ENST00000425072 TRBV7-7A0A0K0K1E9 115 aa6.03□□□□□ -1.44
MDC1-205ENST00000425072 NREPQ16612 68 aa6.03□□□□□ -1.44
MDC1-205ENST00000425072 HRCT1Q6UXD1 115 aa6.03□□□□□ -1.44
MDC1-205ENST00000425072 LINC00304Q8N9R0 145 aa6.03□□□□□ -1.44
MDC1-205ENST00000425072 UBL5Q9BZL1 73 aa6.03□□□□□ -1.44
MDC1-205ENST00000425072 MYCBP2O75592 4640 aa6.03□□□□□ -1.44
MDC1-205ENST00000425072 A0A087WSZ3 146 aa6.01□□□□□ -1.45
MDC1-205ENST00000425072 LIMD2Q9BT23 127 aa6.01□□□□□ -1.45
MDC1-205ENST00000425072 FLG2Q5D862 2391 aaPredicted RBP6□□□□□ -1.45
MDC1-205ENST00000425072 RPS29P62273 56 aaKnown RBP6□□□□□ -1.45
MDC1-205ENST00000425072 Q5XG85 94 aa6□□□□□ -1.45
MDC1-205ENST00000425072 LINC00846Q9NV44 126 aa6□□□□□ -1.45
MDC1-205ENST00000425072 KRTAP29-1A8MX34 341 aaPredicted RBP5.98□□□□□ -1.45
MDC1-205ENST00000425072 ASB16-AS1Q495Z4 193 aa5.98□□□□□ -1.45
MDC1-205ENST00000425072 LINC00643Q86TS7 51 aa5.97□□□□□ -1.45
MDC1-205ENST00000425072 J3KT08 172 aa5.96□□□□□ -1.46
MDC1-205ENST00000425072 Q6ZVQ6 151 aa5.96□□□□□ -1.46
MDC1-205ENST00000425072 HMCN2Q8NDA2 5059 aa5.96□□□□□ -1.46
MDC1-205ENST00000425072 BPY2O14599 106 aa5.94□□□□□ -1.46
MDC1-205ENST00000425072 PKHD1L1Q86WI1 4243 aa5.94□□□□□ -1.46
MDC1-205ENST00000425072 SIGMAR1Q99720 223 aa5.93□□□□□ -1.46
MDC1-205ENST00000425072 LINC00472Q9H8W2 130 aa5.93□□□□□ -1.46
MDC1-205ENST00000425072 MT1HL1P0DM35 61 aa5.92□□□□□ -1.46
MDC1-205ENST00000425072 CXCL6P80162 114 aa5.92□□□□□ -1.46
MDC1-205ENST00000425072 ATP5EP2Q5VTU8 51 aa5.92□□□□□ -1.46
MDC1-205ENST00000425072 KRTAP9-6A0A140TA67 174 aa5.91□□□□□ -1.46
MDC1-205ENST00000425072 NDUFB1O75438 58 aa5.91□□□□□ -1.46
MDC1-205ENST00000425072 IGKV4-1P06312 121 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms