RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PRR26Q8N8Z3 221 aa8□□□□□ -1.13
PRPF39-202ENST00000424478 SMCPP49901 116 aaPredicted RBP7.99□□□□□ -1.13
PRPF39-202ENST00000424478 SMIM29Q86T20 159 aa7.99□□□□□ -1.13
PRPF39-202ENST00000424478 SNCGO76070 127 aa7.98□□□□□ -1.13
PRPF39-202ENST00000424478 IGLV5-48A0A075B6I7 105 aa7.98□□□□□ -1.13
PRPF39-202ENST00000424478 TEX49A0A1B0GTD5 131 aa7.98□□□□□ -1.13
PRPF39-202ENST00000424478 A0A1B0GX51 115 aa7.96□□□□□ -1.13
PRPF39-202ENST00000424478 KRTAP13-2Q52LG2 175 aa7.96□□□□□ -1.13
PRPF39-202ENST00000424478 GTF2H5Q6ZYL4 71 aa7.96□□□□□ -1.13
PRPF39-202ENST00000424478 MOBPQ13875 183 aa7.96□□□□□ -1.14
PRPF39-202ENST00000424478 LAMTOR3Q9UHA4 124 aa7.96□□□□□ -1.14
PRPF39-202ENST00000424478 PRO0461Q9UI25 63 aa7.96□□□□□ -1.14
PRPF39-202ENST00000424478 C9orf153Q5TBE3 101 aa7.95□□□□□ -1.14
PRPF39-202ENST00000424478 ZNF706Q9Y5V0 76 aaPredicted RBP7.95□□□□□ -1.14
PRPF39-202ENST00000424478 TNXBP22105 4242 aa7.94□□□□□ -1.14
PRPF39-202ENST00000424478 LINC00483Q53H64 154 aa7.94□□□□□ -1.14
PRPF39-202ENST00000424478 NDUFV3P56181 108 aaKnown RBP7.93□□□□□ -1.14
PRPF39-202ENST00000424478 UBE2V1Q13404 147 aa7.93□□□□□ -1.14
PRPF39-202ENST00000424478 DMBT1Q9UGM3 2413 aaPredicted RBP7.93□□□□□ -1.14
PRPF39-202ENST00000424478 ANKRD29Q8N6D5 301 aa7.92□□□□□ -1.14
PRPF39-202ENST00000424478 HRCT1Q6UXD1 115 aa7.92□□□□□ -1.14
PRPF39-202ENST00000424478 TMEM256-PLSCR3K7ERE1 68 aa7.92□□□□□ -1.14
PRPF39-202ENST00000424478 SPRR1BP22528 89 aa7.91□□□□□ -1.14
PRPF39-202ENST00000424478 CRYGAP11844 174 aa7.9□□□□□ -1.14
PRPF39-202ENST00000424478 OCIAD2Q56VL3 154 aa7.89□□□□□ -1.15
PRPF39-202ENST00000424478 ETDBQ3ZM63 59 aa7.89□□□□□ -1.15
PRPF39-202ENST00000424478 C14orf132Q9NPU4 83 aa7.88□□□□□ -1.15
PRPF39-202ENST00000424478 TYMSOSQ8TAI1 123 aa7.88□□□□□ -1.15
PRPF39-202ENST00000424478 F8WEM9 126 aa7.87□□□□□ -1.15
PRPF39-202ENST00000424478 H3BT86 120 aa7.87□□□□□ -1.15
PRPF39-202ENST00000424478 Q8NBF4 154 aa7.87□□□□□ -1.15
PRPF39-202ENST00000424478 LINC01600Q96MT4 127 aa7.86□□□□□ -1.15
PRPF39-202ENST00000424478 VPS25Q9BRG1 176 aa7.86□□□□□ -1.15
PRPF39-202ENST00000424478 IGFL1Q6UW32 110 aa7.85□□□□□ -1.15
PRPF39-202ENST00000424478 F8W1H4 67 aa7.84□□□□□ -1.15
PRPF39-202ENST00000424478 FAM229BQ4G0N7 80 aa7.84□□□□□ -1.15
PRPF39-202ENST00000424478 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
PRPF39-202ENST00000424478 RBM3P98179 157 aaKnown RBP7.83□□□□□ -1.16
PRPF39-202ENST00000424478 PPDPFLQ8WWR9 84 aa7.83□□□□□ -1.16
PRPF39-202ENST00000424478 GHRHP01286 108 aa7.81□□□□□ -1.16
PRPF39-202ENST00000424478 KRTAP10-8P60410 259 aa7.8□□□□□ -1.16
PRPF39-202ENST00000424478 HERC1Q15751 4861 aa7.8□□□□□ -1.16
PRPF39-202ENST00000424478 A0A1W2PNM2 257 aa7.79□□□□□ -1.16
PRPF39-202ENST00000424478 DSCR8Q96T75 97 aa7.79□□□□□ -1.16
PRPF39-202ENST00000424478 CCKP06307 115 aa7.79□□□□□ -1.16
PRPF39-202ENST00000424478 TEN1Q86WV5 123 aa7.79□□□□□ -1.16
PRPF39-202ENST00000424478 OBSCN-AS1Q96MR7 158 aa7.78□□□□□ -1.16
PRPF39-202ENST00000424478 IGLV8-61A0A075B6I0 122 aa7.77□□□□□ -1.16
PRPF39-202ENST00000424478 TRBV7-4A0A0J9YYF1 115 aa7.77□□□□□ -1.16
PRPF39-202ENST00000424478 LINC00304Q8N9R0 145 aa7.77□□□□□ -1.17
PRPF39-202ENST00000424478 JMJD7-PLA2G4BH0Y9G9 81 aa7.77□□□□□ -1.17
PRPF39-202ENST00000424478 H3BQ85 93 aa7.76□□□□□ -1.17
PRPF39-202ENST00000424478 Q6ZQT0 140 aa7.76□□□□□ -1.17
PRPF39-202ENST00000424478 J3QL48 77 aa7.75□□□□□ -1.17
PRPF39-202ENST00000424478 SSBP3-AS1Q7Z2R9 100 aa7.75□□□□□ -1.17
PRPF39-202ENST00000424478 RETNLBQ9BQ08 111 aa7.75□□□□□ -1.17
PRPF39-202ENST00000424478 A0A087WSZ3 146 aa7.73□□□□□ -1.17
PRPF39-202ENST00000424478 KRTAP29-1A8MX34 341 aaPredicted RBP7.73□□□□□ -1.17
PRPF39-202ENST00000424478 Q6JHZ5 121 aa7.73□□□□□ -1.17
PRPF39-202ENST00000424478 OXTP01178 125 aa7.73□□□□□ -1.17
PRPF39-202ENST00000424478 C4orf48Q5BLP8 95 aa7.72□□□□□ -1.17
PRPF39-202ENST00000424478 DEFB116Q30KQ4 102 aa7.71□□□□□ -1.18
PRPF39-202ENST00000424478 LOC110117498A0A087WWA1 95 aa7.7□□□□□ -1.18
PRPF39-202ENST00000424478 TRBV7-7A0A0K0K1E9 115 aa7.69□□□□□ -1.18
PRPF39-202ENST00000424478 SPINK1P00995 79 aa7.65□□□□□ -1.19
PRPF39-202ENST00000424478 LINC00846Q9NV44 126 aa7.65□□□□□ -1.19
PRPF39-202ENST00000424478 LPAP08519 4548 aa7.63□□□□□ -1.19
PRPF39-202ENST00000424478 PDE6GP18545 87 aa7.62□□□□□ -1.19
PRPF39-202ENST00000424478 CD164Q04900 197 aa7.61□□□□□ -1.19
PRPF39-202ENST00000424478 SPAG11AQ6PDA7 123 aa7.61□□□□□ -1.19
PRPF39-202ENST00000424478 Q6Q795 121 aa7.61□□□□□ -1.19
PRPF39-202ENST00000424478 C1orf195Q5TG92 126 aa7.59□□□□□ -1.19
PRPF39-202ENST00000424478 Q96NJ1 140 aa7.59□□□□□ -1.2
PRPF39-202ENST00000424478 Q6ZVQ6 151 aa7.57□□□□□ -1.2
PRPF39-202ENST00000424478 LIMD2Q9BT23 127 aa7.57□□□□□ -1.2
PRPF39-202ENST00000424478 PRR4Q16378 134 aa7.57□□□□□ -1.2
PRPF39-202ENST00000424478 NREPQ16612 68 aa7.57□□□□□ -1.2
PRPF39-202ENST00000424478 Q8N9L7 120 aa7.55□□□□□ -1.2
PRPF39-202ENST00000424478 IGKV4-1P06312 121 aa7.54□□□□□ -1.2
PRPF39-202ENST00000424478 SIGMAR1Q99720 223 aa7.54□□□□□ -1.2
PRPF39-202ENST00000424478 LINC00472Q9H8W2 130 aa7.54□□□□□ -1.2
PRPF39-202ENST00000424478 SS18L2Q9UHA2 77 aa7.54□□□□□ -1.2
PRPF39-202ENST00000424478 UBL5Q9BZL1 73 aa7.51□□□□□ -1.21
PRPF39-202ENST00000424478 LRP2P98164 4655 aa7.51□□□□□ -1.21
PRPF39-202ENST00000424478 IGKV3D-7A0A0C4DH55 119 aa7.51□□□□□ -1.21
PRPF39-202ENST00000424478 RPS29P62273 56 aaKnown RBP7.51□□□□□ -1.21
PRPF39-202ENST00000424478 C9orf92A6NGG3 77 aa7.51□□□□□ -1.21
PRPF39-202ENST00000424478 Q5XG85 94 aa7.51□□□□□ -1.21
PRPF39-202ENST00000424478 HMCN2Q8NDA2 5059 aa7.5□□□□□ -1.21
PRPF39-202ENST00000424478 J3QR89 54 aa7.49□□□□□ -1.21
PRPF39-202ENST00000424478 K7ERU9 68 aa7.49□□□□□ -1.21
PRPF39-202ENST00000424478 NOTCH2NLQ7Z3S9 236 aa7.49□□□□□ -1.21
PRPF39-202ENST00000424478 CDIP1Q9H305 208 aa7.49□□□□□ -1.21
PRPF39-202ENST00000424478 FAM240AA0A1B0GVK7 77 aa7.48□□□□□ -1.21
PRPF39-202ENST00000424478 IGLV7-46A0A075B6I9 117 aa7.47□□□□□ -1.21
PRPF39-202ENST00000424478 BPY2O14599 106 aa7.47□□□□□ -1.21
PRPF39-202ENST00000424478 DSCR10P59022 87 aa7.47□□□□□ -1.21
PRPF39-202ENST00000424478 ASB16-AS1Q495Z4 193 aa7.47□□□□□ -1.21
PRPF39-202ENST00000424478 IGHV6-1A0A0B4J1U7 121 aa7.47□□□□□ -1.21
PRPF39-202ENST00000424478 K7EQZ3 153 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms