RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 SPRR1AP35321 89 aa10.55□□□□□ -0.72
CMTM3-202ENST00000424011 DHRS4-AS1Q9P1J3 65 aa10.55□□□□□ -0.72
CMTM3-202ENST00000424011 DNAH10Q8IVF4 4471 aa10.54□□□□□ -0.72
CMTM3-202ENST00000424011 OCR1Q9BZK8 76 aa10.54□□□□□ -0.72
CMTM3-202ENST00000424011 ETDCA0A1B0GVM5 59 aa10.53□□□□□ -0.72
CMTM3-202ENST00000424011 C9orf163Q8N9P6 203 aa10.53□□□□□ -0.72
CMTM3-202ENST00000424011 IGKV2-24A0A0C4DH68 120 aa10.53□□□□□ -0.72
CMTM3-202ENST00000424011 Q6ZRX8 168 aa10.53□□□□□ -0.72
CMTM3-202ENST00000424011 KRTAP4-16G5E9R7 235 aaPredicted RBP10.52□□□□□ -0.73
CMTM3-202ENST00000424011 hDV103S1A0JD37 113 aa10.5□□□□□ -0.73
CMTM3-202ENST00000424011 Q1T7F1 81 aa10.5□□□□□ -0.73
CMTM3-202ENST00000424011 REG3GQ6UW15 175 aa10.5□□□□□ -0.73
CMTM3-202ENST00000424011 IGKV4-1P06312 121 aa10.49□□□□□ -0.73
CMTM3-202ENST00000424011 HIGD2AQ9BW72 106 aa10.48□□□□□ -0.73
CMTM3-202ENST00000424011 A0A1W2PNN7 141 aa10.47□□□□□ -0.73
CMTM3-202ENST00000424011 Q6ZR54 194 aa10.47□□□□□ -0.73
CMTM3-202ENST00000424011 KMT2AQ03164 3969 aa10.47□□□□□ -0.73
CMTM3-202ENST00000424011 Q9BRP9 147 aa10.46□□□□□ -0.73
CMTM3-202ENST00000424011 C3orf84H3BNL1 204 aa10.46□□□□□ -0.74
CMTM3-202ENST00000424011 A0A087WTM6 91 aa10.45□□□□□ -0.74
CMTM3-202ENST00000424011 Q8N9L7 120 aa10.45□□□□□ -0.74
CMTM3-202ENST00000424011 DEFB105AQ8NG35 78 aa10.45□□□□□ -0.74
CMTM3-202ENST00000424011 Q8N377 158 aa10.45□□□□□ -0.74
CMTM3-202ENST00000424011 CD164Q04900 197 aa10.43□□□□□ -0.74
CMTM3-202ENST00000424011 LY6G6CO95867 125 aa10.42□□□□□ -0.74
CMTM3-202ENST00000424011 CHTF8P0CG12 524 aa10.42□□□□□ -0.74
CMTM3-202ENST00000424011 UBE2BP63146 152 aa10.42□□□□□ -0.74
CMTM3-202ENST00000424011 LINC00476Q8WZB0 136 aa10.41□□□□□ -0.74
CMTM3-202ENST00000424011 C1orf134Q5TEV5 83 aa10.41□□□□□ -0.74
CMTM3-202ENST00000424011 DNAH2Q9P225 4427 aa10.4□□□□□ -0.74
CMTM3-202ENST00000424011 ST20-AS1Q8NBB2 130 aa10.4□□□□□ -0.74
CMTM3-202ENST00000424011 C1orf64Q8NEQ6 169 aa10.4□□□□□ -0.74
CMTM3-202ENST00000424011 IGLV5-48A0A075B6I7 105 aa10.39□□□□□ -0.75
CMTM3-202ENST00000424011 PHF5AQ7RTV0 110 aaKnown RBP10.38□□□□□ -0.75
CMTM3-202ENST00000424011 LCE6AA0A183 80 aa10.37□□□□□ -0.75
CMTM3-202ENST00000424011 DNAH6Q9C0G6 4158 aa10.36□□□□□ -0.75
CMTM3-202ENST00000424011 TRAV22A0A0B4J277 110 aa10.36□□□□□ -0.75
CMTM3-202ENST00000424011 PSPHP1O15172 72 aa10.36□□□□□ -0.75
CMTM3-202ENST00000424011 ALMS1Q8TCU4 4167 aa10.36□□□□□ -0.75
CMTM3-202ENST00000424011 SPACA4Q8TDM5 124 aa10.35□□□□□ -0.75
CMTM3-202ENST00000424011 RTL8CO15255 209 aa10.35□□□□□ -0.75
CMTM3-202ENST00000424011 H0Y9J4 135 aa10.34□□□□□ -0.75
CMTM3-202ENST00000424011 FAM30AQ9NZY2 134 aa10.33□□□□□ -0.76
CMTM3-202ENST00000424011 PRLHP81277 87 aa10.33□□□□□ -0.76
CMTM3-202ENST00000424011 TNP2Q05952 138 aa10.32□□□□□ -0.76
CMTM3-202ENST00000424011 SMIM29Q86T20 159 aa10.32□□□□□ -0.76
CMTM3-202ENST00000424011 PANO1I0J062 215 aa10.31□□□□□ -0.76
CMTM3-202ENST00000424011 ZCCHC13Q8WW36 166 aaKnown RBP10.31□□□□□ -0.76
CMTM3-202ENST00000424011 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.3□□□□□ -0.76
CMTM3-202ENST00000424011 IGLV5-52A0A0A0MRZ9 124 aa10.29□□□□□ -0.76
CMTM3-202ENST00000424011 KRTAP11-1Q8IUC1 163 aa10.29□□□□□ -0.76
CMTM3-202ENST00000424011 CYP4F30PQ9H0H9 118 aa10.29□□□□□ -0.76
CMTM3-202ENST00000424011 DNAH17Q9UFH2 4485 aa10.28□□□□□ -0.76
CMTM3-202ENST00000424011 A0A1B0GW54 56 aa10.28□□□□□ -0.76
CMTM3-202ENST00000424011 UBE2AP49459 152 aa10.28□□□□□ -0.76
CMTM3-202ENST00000424011 HYDINQ4G0P3 5121 aa10.27□□□□□ -0.77
CMTM3-202ENST00000424011 C1orf137Q5JT78 98 aa10.27□□□□□ -0.77
CMTM3-202ENST00000424011 A0A1W2PNM2 257 aa10.26□□□□□ -0.77
CMTM3-202ENST00000424011 A8MUN3 132 aa10.25□□□□□ -0.77
CMTM3-202ENST00000424011 SACSQ9NZJ4 4579 aa10.24□□□□□ -0.77
CMTM3-202ENST00000424011 PLAC8Q9NZF1 115 aa10.23□□□□□ -0.77
CMTM3-202ENST00000424011 A8MU10 97 aa10.22□□□□□ -0.77
CMTM3-202ENST00000424011 Q5VV11 94 aa10.22□□□□□ -0.77
CMTM3-202ENST00000424011 KTN1-AS1Q86SY8 53 aa10.22□□□□□ -0.77
CMTM3-202ENST00000424011 Q8NBF4 154 aa10.22□□□□□ -0.77
CMTM3-202ENST00000424011 FRAS1Q86XX4 4008 aa10.2□□□□□ -0.78
CMTM3-202ENST00000424011 SPRR1BP22528 89 aa10.2□□□□□ -0.78
CMTM3-202ENST00000424011 HECTD4Q9Y4D8 3996 aa10.2□□□□□ -0.78
CMTM3-202ENST00000424011 KRTAP13-1Q8IUC0 172 aa10.19□□□□□ -0.78
CMTM3-202ENST00000424011 IGLV8-61A0A075B6I0 122 aa10.18□□□□□ -0.78
CMTM3-202ENST00000424011 SPRR4Q96PI1 79 aa10.18□□□□□ -0.78
CMTM3-202ENST00000424011 RBM12B-AS1Q9P1G2 102 aa10.18□□□□□ -0.78
CMTM3-202ENST00000424011 A0A0G2JQZ4 141 aa10.18□□□□□ -0.78
CMTM3-202ENST00000424011 PRR4Q16378 134 aa10.18□□□□□ -0.78
CMTM3-202ENST00000424011 NDUFB1O75438 58 aa10.16□□□□□ -0.78
CMTM3-202ENST00000424011 IGFL1Q6UW32 110 aa10.15□□□□□ -0.78
CMTM3-202ENST00000424011 FAT2Q9NYQ8 4349 aa10.14□□□□□ -0.79
CMTM3-202ENST00000424011 DNAH11Q96DT5 4516 aa10.14□□□□□ -0.79
CMTM3-202ENST00000424011 PSORS1C2Q9UIG4 136 aa10.13□□□□□ -0.79
CMTM3-202ENST00000424011 CHKB-CPT1BH3BT56 60 aa10.12□□□□□ -0.79
CMTM3-202ENST00000424011 LIMD2Q9BT23 127 aa10.11□□□□□ -0.79
CMTM3-202ENST00000424011 ZNF706Q9Y5V0 76 aaPredicted RBP10.11□□□□□ -0.79
CMTM3-202ENST00000424011 DSCR10P59022 87 aa10.1□□□□□ -0.79
CMTM3-202ENST00000424011 KRTAP10-2P60368 255 aa10.1□□□□□ -0.79
CMTM3-202ENST00000424011 Q8N9P0 234 aaPredicted RBP10.1□□□□□ -0.79
CMTM3-202ENST00000424011 NDUFS5O43920 106 aa10.09□□□□□ -0.79
CMTM3-202ENST00000424011 ATP11AUNQ6ZP68 121 aa10.08□□□□□ -0.8
CMTM3-202ENST00000424011 K7EQZ3 153 aa10.08□□□□□ -0.8
CMTM3-202ENST00000424011 DNAH5Q8TE73 4624 aa10.08□□□□□ -0.8
CMTM3-202ENST00000424011 ZNF861PO60384 105 aa10.07□□□□□ -0.8
CMTM3-202ENST00000424011 HCG22E2RYF7 251 aa10.07□□□□□ -0.8
CMTM3-202ENST00000424011 SRRM2Q9UQ35 2752 aaKnown RBP10.06□□□□□ -0.8
CMTM3-202ENST00000424011 SPTSSBQ8NFR3 76 aa10.06□□□□□ -0.8
CMTM3-202ENST00000424011 LINC00483Q53H64 154 aa10.05□□□□□ -0.8
CMTM3-202ENST00000424011 PKD1P98161 4303 aa10.05□□□□□ -0.8
CMTM3-202ENST00000424011 PRR15LQ9BU68 103 aa10.05□□□□□ -0.8
CMTM3-202ENST00000424011 A6NN06 94 aa10.04□□□□□ -0.8
CMTM3-202ENST00000424011 LCA10Q71F78 164 aa10.04□□□□□ -0.8
CMTM3-202ENST00000424011 LINC00208Q96KT6 92 aa10.04□□□□□ -0.8
CMTM3-202ENST00000424011 A0A087WSZ3 146 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms