RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 UBE2BP63146 152 aa9.13□□□□□ -0.95
MSH5-206ENST00000423982 LINC00588Q9Y4M8 146 aa9.13□□□□□ -0.95
MSH5-206ENST00000423982 SPRR1AP35321 89 aa9.11□□□□□ -0.95
MSH5-206ENST00000423982 C1orf64Q8NEQ6 169 aa9.11□□□□□ -0.95
MSH5-206ENST00000423982 hDV103S1A0JD37 113 aa9.11□□□□□ -0.95
MSH5-206ENST00000423982 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.11□□□□□ -0.95
MSH5-206ENST00000423982 LCE6AA0A183 80 aa9.11□□□□□ -0.95
MSH5-206ENST00000423982 SPRR4Q96PI1 79 aa9.11□□□□□ -0.95
MSH5-206ENST00000423982 DNAH1Q9P2D7 4330 aa9.1□□□□□ -0.95
MSH5-206ENST00000423982 DNAH10Q8IVF4 4471 aa9.1□□□□□ -0.95
MSH5-206ENST00000423982 UBE2DNLQ8IWF7 75 aa9.09□□□□□ -0.95
MSH5-206ENST00000423982 ZCCHC13Q8WW36 166 aaKnown RBP9.09□□□□□ -0.95
MSH5-206ENST00000423982 LINC00476Q8WZB0 136 aa9.09□□□□□ -0.95
MSH5-206ENST00000423982 DYNC2H1Q8NCM8 4307 aaKnown RBP9.09□□□□□ -0.95
MSH5-206ENST00000423982 MRPL55Q7Z7F7 128 aaKnown RBP9.08□□□□□ -0.96
MSH5-206ENST00000423982 TLX1NBP0CAT3 122 aa9.08□□□□□ -0.96
MSH5-206ENST00000423982 WFDC13Q8IUB5 93 aa9.07□□□□□ -0.96
MSH5-206ENST00000423982 PSCAO43653 123 aa9.07□□□□□ -0.96
MSH5-206ENST00000423982 APLNQ9ULZ1 77 aa9.07□□□□□ -0.96
MSH5-206ENST00000423982 PLA2G2DQ9UNK4 145 aa9.07□□□□□ -0.96
MSH5-206ENST00000423982 NUPR2A6NF83 97 aa9.06□□□□□ -0.96
MSH5-206ENST00000423982 DNAH10OSP0CZ25 163 aa9.06□□□□□ -0.96
MSH5-206ENST00000423982 F8WDY8 70 aa9.05□□□□□ -0.96
MSH5-206ENST00000423982 HCG22E2RYF7 251 aa9.05□□□□□ -0.96
MSH5-206ENST00000423982 RPL37AP61513 92 aaKnown RBP9.05□□□□□ -0.96
MSH5-206ENST00000423982 PRLHP81277 87 aa9.05□□□□□ -0.96
MSH5-206ENST00000423982 IGFL1Q6UW32 110 aa9.04□□□□□ -0.96
MSH5-206ENST00000423982 IGLV5-37A0A075B6J1 123 aa9.04□□□□□ -0.96
MSH5-206ENST00000423982 PSPHP1O15172 72 aa9.04□□□□□ -0.96
MSH5-206ENST00000423982 KMT2AQ03164 3969 aa9.04□□□□□ -0.96
MSH5-206ENST00000423982 A0A1B0GW54 56 aa9.03□□□□□ -0.96
MSH5-206ENST00000423982 REG3GQ6UW15 175 aa9.03□□□□□ -0.96
MSH5-206ENST00000423982 A0A087WSZ3 146 aa9.02□□□□□ -0.97
MSH5-206ENST00000423982 IGKV2-24A0A0C4DH68 120 aa9.01□□□□□ -0.97
MSH5-206ENST00000423982 C1orf195Q5TG92 126 aa9.01□□□□□ -0.97
MSH5-206ENST00000423982 KRTAP1-5Q9BYS1 174 aa9□□□□□ -0.97
MSH5-206ENST00000423982 WWC2-AS2Q96NR7 200 aa8.97□□□□□ -0.97
MSH5-206ENST00000423982 VPS13DQ5THJ4 4388 aa8.97□□□□□ -0.97
MSH5-206ENST00000423982 TRAV22A0A0B4J277 110 aa8.96□□□□□ -0.97
MSH5-206ENST00000423982 Q1T7F1 81 aa8.96□□□□□ -0.97
MSH5-206ENST00000423982 LINC00208Q96KT6 92 aa8.96□□□□□ -0.97
MSH5-206ENST00000423982 A0A096LNI7 61 aa8.96□□□□□ -0.98
MSH5-206ENST00000423982 LY6G6CO95867 125 aa8.95□□□□□ -0.98
MSH5-206ENST00000423982 A8MU10 97 aa8.94□□□□□ -0.98
MSH5-206ENST00000423982 KRTAP11-1Q8IUC1 163 aa8.94□□□□□ -0.98
MSH5-206ENST00000423982 CYP4F30PQ9H0H9 118 aa8.93□□□□□ -0.98
MSH5-206ENST00000423982 A8MUN3 132 aa8.92□□□□□ -0.98
MSH5-206ENST00000423982 DNAH2Q9P225 4427 aa8.91□□□□□ -0.98
MSH5-206ENST00000423982 MP68P56378 58 aa8.9□□□□□ -0.98
MSH5-206ENST00000423982 HYDINQ4G0P3 5121 aa8.9□□□□□ -0.98
MSH5-206ENST00000423982 KRTAP29-1A8MX34 341 aaPredicted RBP8.9□□□□□ -0.98
MSH5-206ENST00000423982 CHTF8P0CG12 524 aa8.9□□□□□ -0.98
MSH5-206ENST00000423982 UBE2AP49459 152 aa8.89□□□□□ -0.99
MSH5-206ENST00000423982 CNBPP62633 177 aaKnown RBP8.89□□□□□ -0.99
MSH5-206ENST00000423982 NBDYA0A0U1RRE5 68 aa8.88□□□□□ -0.99
MSH5-206ENST00000423982 H0Y9P7 68 aa8.88□□□□□ -0.99
MSH5-206ENST00000423982 CASC2Q6XLA1 102 aa8.88□□□□□ -0.99
MSH5-206ENST00000423982 PHF5AQ7RTV0 110 aaKnown RBP8.88□□□□□ -0.99
MSH5-206ENST00000423982 PRR15Q8IV56 129 aa8.87□□□□□ -0.99
MSH5-206ENST00000423982 V9GYY9 64 aa8.87□□□□□ -0.99
MSH5-206ENST00000423982 IGLV8-61A0A075B6I0 122 aa8.86□□□□□ -0.99
MSH5-206ENST00000423982 NDUFB1O75438 58 aa8.86□□□□□ -0.99
MSH5-206ENST00000423982 C16orf90A8MZG2 172 aa8.84□□□□□ -0.99
MSH5-206ENST00000423982 Q5VV11 94 aa8.82□□□□□ -1
MSH5-206ENST00000423982 LINC00472Q9H8W2 130 aa8.82□□□□□ -1
MSH5-206ENST00000423982 KMT2CQ8NEZ4 4911 aaKnown RBP8.8□□□□□ -1
MSH5-206ENST00000423982 A8MWP4 228 aa8.8□□□□□ -1
MSH5-206ENST00000423982 H0Y9J4 135 aa8.8□□□□□ -1
MSH5-206ENST00000423982 SACSQ9NZJ4 4579 aa8.8□□□□□ -1
MSH5-206ENST00000423982 Q8N9P0 234 aaPredicted RBP8.78□□□□□ -1
MSH5-206ENST00000423982 FRAS1Q86XX4 4008 aa8.77□□□□□ -1.01
MSH5-206ENST00000423982 PMAIP1Q13794 54 aa8.77□□□□□ -1.01
MSH5-206ENST00000423982 SEC61GP60059 68 aa8.76□□□□□ -1.01
MSH5-206ENST00000423982 C9orf163Q8N9P6 203 aa8.76□□□□□ -1.01
MSH5-206ENST00000423982 PCOTHQ58A44 107 aa8.76□□□□□ -1.01
MSH5-206ENST00000423982 PRR15LQ9BU68 103 aa8.76□□□□□ -1.01
MSH5-206ENST00000423982 MMP24-AS1A0A0U1RRL7 71 aa8.75□□□□□ -1.01
MSH5-206ENST00000423982 CHKB-CPT1BH3BT56 60 aa8.75□□□□□ -1.01
MSH5-206ENST00000423982 SPANXA2-OT1Q8N9U9 137 aa8.75□□□□□ -1.01
MSH5-206ENST00000423982 ALMS1Q8TCU4 4167 aa8.75□□□□□ -1.01
MSH5-206ENST00000423982 PANO1I0J062 215 aa8.74□□□□□ -1.01
MSH5-206ENST00000423982 Q6ZR54 194 aa8.74□□□□□ -1.01
MSH5-206ENST00000423982 Q6ZRN7 208 aaPredicted RBP8.74□□□□□ -1.01
MSH5-206ENST00000423982 SPRR1BP22528 89 aa8.73□□□□□ -1.01
MSH5-206ENST00000423982 C1orf134Q5TEV5 83 aa8.73□□□□□ -1.01
MSH5-206ENST00000423982 IGLV9-49A0A0B4J1Y8 123 aa8.71□□□□□ -1.01
MSH5-206ENST00000423982 COA5Q86WW8 74 aa8.71□□□□□ -1.01
MSH5-206ENST00000423982 H3BPC8 53 aa8.7□□□□□ -1.02
MSH5-206ENST00000423982 DNAH17Q9UFH2 4485 aa8.69□□□□□ -1.02
MSH5-206ENST00000423982 HECTD4Q9Y4D8 3996 aa8.69□□□□□ -1.02
MSH5-206ENST00000423982 DNAH6Q9C0G6 4158 aa8.68□□□□□ -1.02
MSH5-206ENST00000423982 CD164Q04900 197 aa8.68□□□□□ -1.02
MSH5-206ENST00000423982 Q96NJ1 140 aa8.67□□□□□ -1.02
MSH5-206ENST00000423982 A0A087WTM6 91 aa8.67□□□□□ -1.02
MSH5-206ENST00000423982 SPTSSBQ8NFR3 76 aa8.67□□□□□ -1.02
MSH5-206ENST00000423982 LIMD2Q9BT23 127 aa8.67□□□□□ -1.02
MSH5-206ENST00000423982 LCA10Q71F78 164 aa8.67□□□□□ -1.02
MSH5-206ENST00000423982 FAT2Q9NYQ8 4349 aa8.66□□□□□ -1.02
MSH5-206ENST00000423982 IGLV7-46A0A075B6I9 117 aa8.65□□□□□ -1.02
MSH5-206ENST00000423982 RTL8CO15255 209 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms