RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 H3BQ85 93 aa7.4□□□□□ -1.22
TMEM53-206ENST00000420706 CRYGAP11844 174 aa7.4□□□□□ -1.22
TMEM53-206ENST00000420706 LINC01600Q96MT4 127 aa7.4□□□□□ -1.22
TMEM53-206ENST00000420706 LAMTOR3Q9UHA4 124 aa7.4□□□□□ -1.22
TMEM53-206ENST00000420706 SRRM2Q9UQ35 2752 aaKnown RBP7.39□□□□□ -1.23
TMEM53-206ENST00000420706 C9JAW5 83 aa7.39□□□□□ -1.23
TMEM53-206ENST00000420706 TMEM256-PLSCR3K7ERE1 68 aa7.39□□□□□ -1.23
TMEM53-206ENST00000420706 KRTAP13-2Q52LG2 175 aa7.39□□□□□ -1.23
TMEM53-206ENST00000420706 C3orf22Q8N5N4 141 aa7.39□□□□□ -1.23
TMEM53-206ENST00000420706 PRR26Q8N8Z3 221 aa7.39□□□□□ -1.23
TMEM53-206ENST00000420706 A0A1B0GV90 55 aa7.38□□□□□ -1.23
TMEM53-206ENST00000420706 GTF2H5Q6ZYL4 71 aa7.38□□□□□ -1.23
TMEM53-206ENST00000420706 IGLV9-49A0A0B4J1Y8 123 aa7.36□□□□□ -1.23
TMEM53-206ENST00000420706 OXTP01178 125 aa7.36□□□□□ -1.23
TMEM53-206ENST00000420706 NDUFV3P56181 108 aaKnown RBP7.36□□□□□ -1.23
TMEM53-206ENST00000420706 UBE2V1Q13404 147 aa7.36□□□□□ -1.23
TMEM53-206ENST00000420706 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
TMEM53-206ENST00000420706 MTURNQ8N3F0 131 aa7.35□□□□□ -1.23
TMEM53-206ENST00000420706 FAT3Q8TDW7 4589 aa7.34□□□□□ -1.23
TMEM53-206ENST00000420706 H3BT86 120 aa7.34□□□□□ -1.23
TMEM53-206ENST00000420706 SSBP3-AS1Q7Z2R9 100 aa7.34□□□□□ -1.23
TMEM53-206ENST00000420706 PRO0461Q9UI25 63 aa7.34□□□□□ -1.23
TMEM53-206ENST00000420706 KRTAP29-1A8MX34 341 aaPredicted RBP7.33□□□□□ -1.24
TMEM53-206ENST00000420706 F8WEM9 126 aa7.33□□□□□ -1.24
TMEM53-206ENST00000420706 J3QL48 77 aa7.33□□□□□ -1.24
TMEM53-206ENST00000420706 SMCPP49901 116 aaPredicted RBP7.33□□□□□ -1.24
TMEM53-206ENST00000420706 MOBPQ13875 183 aa7.33□□□□□ -1.24
TMEM53-206ENST00000420706 C9orf153Q5TBE3 101 aa7.33□□□□□ -1.24
TMEM53-206ENST00000420706 ANKRD29Q8N6D5 301 aa7.33□□□□□ -1.24
TMEM53-206ENST00000420706 TYMSOSQ8TAI1 123 aa7.33□□□□□ -1.24
TMEM53-206ENST00000420706 FLG2Q5D862 2391 aaPredicted RBP7.32□□□□□ -1.24
TMEM53-206ENST00000420706 IGLV8-61A0A075B6I0 122 aa7.32□□□□□ -1.24
TMEM53-206ENST00000420706 Q8NBF4 154 aa7.32□□□□□ -1.24
TMEM53-206ENST00000420706 MT1HL1P0DM35 61 aa7.31□□□□□ -1.24
TMEM53-206ENST00000420706 LRP1Q07954 4544 aaKnown RBP7.31□□□□□ -1.24
TMEM53-206ENST00000420706 F8W1H4 67 aa7.29□□□□□ -1.24
TMEM53-206ENST00000420706 A0A0G2JQZ4 141 aa7.28□□□□□ -1.24
TMEM53-206ENST00000420706 A0A1B0GV72 72 aa7.28□□□□□ -1.24
TMEM53-206ENST00000420706 RBM3P98179 157 aaKnown RBP7.28□□□□□ -1.24
TMEM53-206ENST00000420706 Q6JHZ5 121 aa7.28□□□□□ -1.24
TMEM53-206ENST00000420706 IGFL1Q6UW32 110 aa7.28□□□□□ -1.24
TMEM53-206ENST00000420706 MYCBP2O75592 4640 aa7.28□□□□□ -1.24
TMEM53-206ENST00000420706 JMJD7-PLA2G4BH0Y9G9 81 aa7.27□□□□□ -1.25
TMEM53-206ENST00000420706 OBSCN-AS1Q96MR7 158 aa7.27□□□□□ -1.25
TMEM53-206ENST00000420706 TNXBP22105 4242 aa7.25□□□□□ -1.25
TMEM53-206ENST00000420706 LINC00304Q8N9R0 145 aa7.25□□□□□ -1.25
TMEM53-206ENST00000420706 TRBV7-4A0A0J9YYF1 115 aa7.24□□□□□ -1.25
TMEM53-206ENST00000420706 C4orf48Q5BLP8 95 aa7.23□□□□□ -1.25
TMEM53-206ENST00000420706 DSCR8Q96T75 97 aa7.23□□□□□ -1.25
TMEM53-206ENST00000420706 CD164Q04900 197 aa7.22□□□□□ -1.25
TMEM53-206ENST00000420706 SPAG11AQ6PDA7 123 aa7.22□□□□□ -1.25
TMEM53-206ENST00000420706 HRCT1Q6UXD1 115 aa7.22□□□□□ -1.25
TMEM53-206ENST00000420706 C14orf132Q9NPU4 83 aa7.22□□□□□ -1.25
TMEM53-206ENST00000420706 A0A1W2PNM2 257 aa7.21□□□□□ -1.26
TMEM53-206ENST00000420706 ETDBQ3ZM63 59 aa7.21□□□□□ -1.26
TMEM53-206ENST00000420706 TEN1Q86WV5 123 aa7.21□□□□□ -1.26
TMEM53-206ENST00000420706 LOC110117498A0A087WWA1 95 aa7.2□□□□□ -1.26
TMEM53-206ENST00000420706 SPINK1P00995 79 aa7.2□□□□□ -1.26
TMEM53-206ENST00000420706 Q6Q795 121 aa7.2□□□□□ -1.26
TMEM53-206ENST00000420706 PDE6GP18545 87 aa7.19□□□□□ -1.26
TMEM53-206ENST00000420706 Q6ZQT0 140 aa7.19□□□□□ -1.26
TMEM53-206ENST00000420706 TRBV7-7A0A0K0K1E9 115 aa7.18□□□□□ -1.26
TMEM53-206ENST00000420706 CCKP06307 115 aa7.18□□□□□ -1.26
TMEM53-206ENST00000420706 HERC1Q15751 4861 aa7.18□□□□□ -1.26
TMEM53-206ENST00000420706 DMBT1Q9UGM3 2413 aaPredicted RBP7.16□□□□□ -1.26
TMEM53-206ENST00000420706 RPS29P62273 56 aaKnown RBP7.16□□□□□ -1.26
TMEM53-206ENST00000420706 VPS25Q9BRG1 176 aa7.16□□□□□ -1.26
TMEM53-206ENST00000420706 C21orf62-AS1Q17RA5 79 aa7.14□□□□□ -1.27
TMEM53-206ENST00000420706 Q5XG85 94 aa7.14□□□□□ -1.27
TMEM53-206ENST00000420706 A0A087WSZ3 146 aa7.13□□□□□ -1.27
TMEM53-206ENST00000420706 LIMD2Q9BT23 127 aa7.12□□□□□ -1.27
TMEM53-206ENST00000420706 A0A1B0GW54 56 aa7.11□□□□□ -1.27
TMEM53-206ENST00000420706 ASB16-AS1Q495Z4 193 aa7.09□□□□□ -1.27
TMEM53-206ENST00000420706 SS18L2Q9UHA2 77 aa7.09□□□□□ -1.27
TMEM53-206ENST00000420706 C1orf195Q5TG92 126 aa7.06□□□□□ -1.28
TMEM53-206ENST00000420706 RETNLBQ9BQ08 111 aa7.06□□□□□ -1.28
TMEM53-206ENST00000420706 Q96NJ1 140 aa7.04□□□□□ -1.28
TMEM53-206ENST00000420706 LINC00472Q9H8W2 130 aa7.03□□□□□ -1.28
TMEM53-206ENST00000420706 NREPQ16612 68 aa7.02□□□□□ -1.29
TMEM53-206ENST00000420706 LINC00846Q9NV44 126 aa7.02□□□□□ -1.29
TMEM53-206ENST00000420706 ACYP1P07311 99 aa7□□□□□ -1.29
TMEM53-206ENST00000420706 DEFB116Q30KQ4 102 aa7□□□□□ -1.29
TMEM53-206ENST00000420706 FP248Q71RG6 208 aaPredicted RBP7□□□□□ -1.29
TMEM53-206ENST00000420706 FAM240AA0A1B0GVK7 77 aa6.99□□□□□ -1.29
TMEM53-206ENST00000420706 PRR4Q16378 134 aa6.99□□□□□ -1.29
TMEM53-206ENST00000420706 Q6ZVQ6 151 aa6.99□□□□□ -1.29
TMEM53-206ENST00000420706 J3QR89 54 aa6.98□□□□□ -1.29
TMEM53-206ENST00000420706 IGLV7-46A0A075B6I9 117 aa6.97□□□□□ -1.29
TMEM53-206ENST00000420706 IGKV4-1P06312 121 aa6.97□□□□□ -1.29
TMEM53-206ENST00000420706 UBL5Q9BZL1 73 aa6.97□□□□□ -1.29
TMEM53-206ENST00000420706 HMCN2Q8NDA2 5059 aa6.96□□□□□ -1.29
TMEM53-206ENST00000420706 J3KT08 172 aa6.95□□□□□ -1.3
TMEM53-206ENST00000420706 SIGMAR1Q99720 223 aa6.93□□□□□ -1.3
TMEM53-206ENST00000420706 BPY2O14599 106 aa6.92□□□□□ -1.3
TMEM53-206ENST00000420706 K7ERU9 68 aa6.91□□□□□ -1.3
TMEM53-206ENST00000420706 DSCR10P59022 87 aa6.91□□□□□ -1.3
TMEM53-206ENST00000420706 A8MWP4 228 aa6.89□□□□□ -1.31
TMEM53-206ENST00000420706 KRTAP13-3Q3SY46 172 aa6.89□□□□□ -1.31
TMEM53-206ENST00000420706 IGKV3D-7A0A0C4DH55 119 aa6.88□□□□□ -1.31
TMEM53-206ENST00000420706 A0A1B0GVX0 72 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms