RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 BVES-AS1Q5T3Y7 98 aa11.53□□□□□ -0.56
PTPN4-202ENST00000420482 S100A1P23297 94 aa11.52□□□□□ -0.57
PTPN4-202ENST00000420482 HIST1H4GQ99525 98 aa11.51□□□□□ -0.57
PTPN4-202ENST00000420482 SCGB1D1O95968 90 aa11.49□□□□□ -0.57
PTPN4-202ENST00000420482 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.49□□□□□ -0.57
PTPN4-202ENST00000420482 PPDPFLQ8WWR9 84 aa11.49□□□□□ -0.57
PTPN4-202ENST00000420482 CLEC2BQ92478 149 aa11.49□□□□□ -0.57
PTPN4-202ENST00000420482 RPL37P61927 97 aaKnown RBP11.47□□□□□ -0.57
PTPN4-202ENST00000420482 CRCT1Q9UGL9 99 aa11.47□□□□□ -0.57
PTPN4-202ENST00000420482 SNCGO76070 127 aa11.46□□□□□ -0.57
PTPN4-202ENST00000420482 OCIAD2Q56VL3 154 aa11.46□□□□□ -0.57
PTPN4-202ENST00000420482 LCE2CQ5TA81 110 aa11.46□□□□□ -0.57
PTPN4-202ENST00000420482 C12orf57Q99622 126 aa11.45□□□□□ -0.58
PTPN4-202ENST00000420482 SNHG12Q9BXW3 62 aa11.45□□□□□ -0.58
PTPN4-202ENST00000420482 TRBV7-7A0A0K0K1E9 115 aa11.44□□□□□ -0.58
PTPN4-202ENST00000420482 COX8AP10176 69 aa11.43□□□□□ -0.58
PTPN4-202ENST00000420482 IGFL1Q6UW32 110 aa11.43□□□□□ -0.58
PTPN4-202ENST00000420482 FSIP2Q5CZC0 6907 aa11.42□□□□□ -0.58
PTPN4-202ENST00000420482 CFC1BP0CG36 223 aa11.41□□□□□ -0.58
PTPN4-202ENST00000420482 KRTAP19-2Q3LHN2 52 aa11.41□□□□□ -0.58
PTPN4-202ENST00000420482 DLEU1O43261 78 aa11.4□□□□□ -0.58
PTPN4-202ENST00000420482 RAB37Q96AX2 223 aa11.39□□□□□ -0.59
PTPN4-202ENST00000420482 MT1HP80294 61 aa11.37□□□□□ -0.59
PTPN4-202ENST00000420482 H0YGX0 51 aa11.35□□□□□ -0.59
PTPN4-202ENST00000420482 COX6B2Q6YFQ2 88 aa11.35□□□□□ -0.59
PTPN4-202ENST00000420482 LST1O00453 97 aa11.34□□□□□ -0.59
PTPN4-202ENST00000420482 GHRHP01286 108 aa11.34□□□□□ -0.59
PTPN4-202ENST00000420482 SS18L2Q9UHA2 77 aa11.34□□□□□ -0.59
PTPN4-202ENST00000420482 HIGD1BQ9P298 99 aa11.33□□□□□ -0.6
PTPN4-202ENST00000420482 CFC1P0CG37 223 aa11.32□□□□□ -0.6
PTPN4-202ENST00000420482 A0A0B4J2C4 111 aa11.31□□□□□ -0.6
PTPN4-202ENST00000420482 H3BUT2 72 aa11.31□□□□□ -0.6
PTPN4-202ENST00000420482 ATP11AUNQ6ZP68 121 aa11.31□□□□□ -0.6
PTPN4-202ENST00000420482 C14orf144Q96I85 54 aa11.31□□□□□ -0.6
PTPN4-202ENST00000420482 SPATA45Q537H7 98 aa11.29□□□□□ -0.6
PTPN4-202ENST00000420482 OBSCN-AS1Q96MR7 158 aa11.29□□□□□ -0.6
PTPN4-202ENST00000420482 PAM16Q9Y3D7 125 aa11.29□□□□□ -0.6
PTPN4-202ENST00000420482 M0R2T5 61 aa11.28□□□□□ -0.6
PTPN4-202ENST00000420482 VAMP8Q9BV40 100 aa11.28□□□□□ -0.6
PTPN4-202ENST00000420482 Q6Q795 121 aa11.27□□□□□ -0.61
PTPN4-202ENST00000420482 TMEM238LA0A1B0GVL6 79 aa11.26□□□□□ -0.61
PTPN4-202ENST00000420482 A6NJY4 79 aa11.26□□□□□ -0.61
PTPN4-202ENST00000420482 Q75L30 129 aa11.26□□□□□ -0.61
PTPN4-202ENST00000420482 TEN1Q86WV5 123 aa11.26□□□□□ -0.61
PTPN4-202ENST00000420482 NDUFV3P56181 108 aaKnown RBP11.25□□□□□ -0.61
PTPN4-202ENST00000420482 A0A1B0GX51 115 aa11.24□□□□□ -0.61
PTPN4-202ENST00000420482 CEND1Q8N111 149 aa11.22□□□□□ -0.61
PTPN4-202ENST00000420482 PRO1854Q9UHT4 67 aa11.22□□□□□ -0.61
PTPN4-202ENST00000420482 LORP23490 312 aaPredicted RBP11.21□□□□□ -0.61
PTPN4-202ENST00000420482 Q96NJ1 140 aa11.21□□□□□ -0.61
PTPN4-202ENST00000420482 H3BMG7 143 aa11.2□□□□□ -0.62
PTPN4-202ENST00000420482 FAM218AQ96MZ4 157 aa11.2□□□□□ -0.62
PTPN4-202ENST00000420482 FABP2P12104 132 aa11.19□□□□□ -0.62
PTPN4-202ENST00000420482 C2orf91Q6ZV80 131 aa11.19□□□□□ -0.62
PTPN4-202ENST00000420482 KRTAP10-6P60371 365 aaPredicted RBP11.18□□□□□ -0.62
PTPN4-202ENST00000420482 A0A087WSZ3 146 aa11.17□□□□□ -0.62
PTPN4-202ENST00000420482 H3BQ85 93 aa11.13□□□□□ -0.63
PTPN4-202ENST00000420482 DNAL4O96015 105 aa11.13□□□□□ -0.63
PTPN4-202ENST00000420482 TRIAP1O43715 76 aa11.1□□□□□ -0.63
PTPN4-202ENST00000420482 C20orf166-AS1Q96NR2 134 aa11.1□□□□□ -0.63
PTPN4-202ENST00000420482 FLGP20930 4061 aaPredicted RBP11.1□□□□□ -0.63
PTPN4-202ENST00000420482 FXYD2P54710 66 aa11.09□□□□□ -0.63
PTPN4-202ENST00000420482 COX6CP09669 75 aa11.08□□□□□ -0.64
PTPN4-202ENST00000420482 PSMB2P49721 201 aa11.08□□□□□ -0.64
PTPN4-202ENST00000420482 ORMDL1Q9P0S3 153 aa11.08□□□□□ -0.64
PTPN4-202ENST00000420482 A8MUU9 505 aa11.07□□□□□ -0.64
PTPN4-202ENST00000420482 ANKRD29Q8N6D5 301 aa11.07□□□□□ -0.64
PTPN4-202ENST00000420482 SIGMAR1Q99720 223 aa11.07□□□□□ -0.64
PTPN4-202ENST00000420482 TRBV20-1A0A075B6N2 111 aa11.06□□□□□ -0.64
PTPN4-202ENST00000420482 HSD52Q0P140 79 aa11.05□□□□□ -0.64
PTPN4-202ENST00000420482 TRBV7-4A0A0J9YYF1 115 aa11.04□□□□□ -0.64
PTPN4-202ENST00000420482 TMEM256-PLSCR3K7ERE1 68 aa11.04□□□□□ -0.64
PTPN4-202ENST00000420482 A0A1W2PNM2 257 aa11.03□□□□□ -0.64
PTPN4-202ENST00000420482 DSCR10P59022 87 aa11.01□□□□□ -0.65
PTPN4-202ENST00000420482 LINC00313P59037 77 aa11□□□□□ -0.65
PTPN4-202ENST00000420482 IGKV4-1P06312 121 aa10.99□□□□□ -0.65
PTPN4-202ENST00000420482 A0A1B0GV72 72 aa10.96□□□□□ -0.65
PTPN4-202ENST00000420482 TRACP01848 142 aa10.96□□□□□ -0.65
PTPN4-202ENST00000420482 K7ERJ3 54 aa10.95□□□□□ -0.66
PTPN4-202ENST00000420482 CCKP06307 115 aa10.95□□□□□ -0.66
PTPN4-202ENST00000420482 PYY3Q5JQD4 70 aa10.95□□□□□ -0.66
PTPN4-202ENST00000420482 UBE2V1Q13404 147 aa10.93□□□□□ -0.66
PTPN4-202ENST00000420482 UQCR10Q9UDW1 63 aa10.92□□□□□ -0.66
PTPN4-202ENST00000420482 SCGB1C2P0DMR2 95 aa10.88□□□□□ -0.67
PTPN4-202ENST00000420482 LINC00472Q9H8W2 130 aa10.88□□□□□ -0.67
PTPN4-202ENST00000420482 IGHV6-1A0A0B4J1U7 121 aa10.86□□□□□ -0.67
PTPN4-202ENST00000420482 DEFB116Q30KQ4 102 aa10.86□□□□□ -0.67
PTPN4-202ENST00000420482 DSCR8Q96T75 97 aa10.86□□□□□ -0.67
PTPN4-202ENST00000420482 FAM236DA0A1B0GTK5 79 aa10.85□□□□□ -0.67
PTPN4-202ENST00000420482 FAM236CP0DP71 79 aa10.85□□□□□ -0.67
PTPN4-202ENST00000420482 RBM3P98179 157 aaKnown RBP10.85□□□□□ -0.67
PTPN4-202ENST00000420482 C21orf62-AS1Q17RA5 79 aa10.85□□□□□ -0.67
PTPN4-202ENST00000420482 VPS25Q9BRG1 176 aa10.85□□□□□ -0.67
PTPN4-202ENST00000420482 KRTAP16-1A8MUX0 517 aa10.84□□□□□ -0.67
PTPN4-202ENST00000420482 RBM12B-AS1Q9P1G2 102 aa10.83□□□□□ -0.68
PTPN4-202ENST00000420482 C8orf87E5RJ46 101 aa10.81□□□□□ -0.68
PTPN4-202ENST00000420482 NOTCH2NLQ7Z3S9 236 aa10.79□□□□□ -0.68
PTPN4-202ENST00000420482 A0A1B0GVX0 72 aa10.77□□□□□ -0.69
PTPN4-202ENST00000420482 C9JAW5 83 aa10.77□□□□□ -0.69
PTPN4-202ENST00000420482 J3KT08 172 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms