RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 RPL37AP61513 92 aaKnown RBP9.04□□□□□ -0.96
HLA-DPA1-242ENST00000419277 ZNF706Q9Y5V0 76 aaPredicted RBP9.04□□□□□ -0.96
HLA-DPA1-242ENST00000419277 DNHD1Q96M86 4753 aa9.04□□□□□ -0.96
HLA-DPA1-242ENST00000419277 IGKV4-1P06312 121 aa9.03□□□□□ -0.96
HLA-DPA1-242ENST00000419277 IGFL1Q6UW32 110 aa9.03□□□□□ -0.96
HLA-DPA1-242ENST00000419277 TMEM258P61165 79 aa9.02□□□□□ -0.96
HLA-DPA1-242ENST00000419277 DPH3Q96FX2 82 aa9.02□□□□□ -0.96
HLA-DPA1-242ENST00000419277 PLAC8Q9NZF1 115 aa9.02□□□□□ -0.97
HLA-DPA1-242ENST00000419277 WWC2-AS2Q96NR7 200 aa9□□□□□ -0.97
HLA-DPA1-242ENST00000419277 SS18L2Q9UHA2 77 aa9□□□□□ -0.97
HLA-DPA1-242ENST00000419277 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9□□□□□ -0.97
HLA-DPA1-242ENST00000419277 STARD9Q9P2P6 4700 aa9□□□□□ -0.97
HLA-DPA1-242ENST00000419277 SCXQ7RTU7 201 aa9□□□□□ -0.97
HLA-DPA1-242ENST00000419277 IGLV5-52A0A0A0MRZ9 124 aa8.99□□□□□ -0.97
HLA-DPA1-242ENST00000419277 KLKP1Q107X0 134 aa8.98□□□□□ -0.97
HLA-DPA1-242ENST00000419277 KRTAP11-1Q8IUC1 163 aa8.98□□□□□ -0.97
HLA-DPA1-242ENST00000419277 PANO1I0J062 215 aa8.97□□□□□ -0.97
HLA-DPA1-242ENST00000419277 LINC00483Q53H64 154 aa8.97□□□□□ -0.97
HLA-DPA1-242ENST00000419277 NDUFC1O43677 76 aa8.96□□□□□ -0.98
HLA-DPA1-242ENST00000419277 LY6G6CO95867 125 aa8.94□□□□□ -0.98
HLA-DPA1-242ENST00000419277 A0A087WSZ3 146 aa8.92□□□□□ -0.98
HLA-DPA1-242ENST00000419277 C20orf197Q8N268 126 aa8.92□□□□□ -0.98
HLA-DPA1-242ENST00000419277 DSCR10P59022 87 aa8.91□□□□□ -0.98
HLA-DPA1-242ENST00000419277 J3KT08 172 aa8.91□□□□□ -0.98
HLA-DPA1-242ENST00000419277 ZNF861PO60384 105 aa8.91□□□□□ -0.98
HLA-DPA1-242ENST00000419277 OCR1Q9BZK8 76 aa8.91□□□□□ -0.98
HLA-DPA1-242ENST00000419277 Q8N9L7 120 aa8.9□□□□□ -0.98
HLA-DPA1-242ENST00000419277 PSORS1C2Q9UIG4 136 aa8.9□□□□□ -0.98
HLA-DPA1-242ENST00000419277 DNAH6Q9C0G6 4158 aa8.9□□□□□ -0.99
HLA-DPA1-242ENST00000419277 RPS28P62857 69 aaKnown RBP8.88□□□□□ -0.99
HLA-DPA1-242ENST00000419277 FBN3Q75N90 2809 aa8.88□□□□□ -0.99
HLA-DPA1-242ENST00000419277 HCG22E2RYF7 251 aa8.87□□□□□ -0.99
HLA-DPA1-242ENST00000419277 ATP5EP56381 51 aaPredicted RBP8.87□□□□□ -0.99
HLA-DPA1-242ENST00000419277 K7EQZ3 153 aa8.86□□□□□ -0.99
HLA-DPA1-242ENST00000419277 TMEM254Q8TBM7 123 aa8.85□□□□□ -0.99
HLA-DPA1-242ENST00000419277 DNAH17Q9UFH2 4485 aa8.84□□□□□ -0.99
HLA-DPA1-242ENST00000419277 LCE6AA0A183 80 aa8.83□□□□□ -1
HLA-DPA1-242ENST00000419277 A8MWP4 228 aa8.83□□□□□ -1
HLA-DPA1-242ENST00000419277 H7BZZ5 65 aa8.83□□□□□ -1
HLA-DPA1-242ENST00000419277 CYSTM1Q9H1C7 97 aa8.83□□□□□ -1
HLA-DPA1-242ENST00000419277 LINC00472Q9H8W2 130 aa8.83□□□□□ -1
HLA-DPA1-242ENST00000419277 HECTD4Q9Y4D8 3996 aa8.83□□□□□ -1
HLA-DPA1-242ENST00000419277 TGP01266 2768 aa8.82□□□□□ -1
HLA-DPA1-242ENST00000419277 DNAH2Q9P225 4427 aa8.81□□□□□ -1
HLA-DPA1-242ENST00000419277 KMT2AQ03164 3969 aa8.81□□□□□ -1
HLA-DPA1-242ENST00000419277 IGLV7-43P04211 117 aa8.81□□□□□ -1
HLA-DPA1-242ENST00000419277 FAM236DA0A1B0GTK5 79 aa8.8□□□□□ -1
HLA-DPA1-242ENST00000419277 FAM236CP0DP71 79 aa8.8□□□□□ -1
HLA-DPA1-242ENST00000419277 C5orf47Q569G3 176 aa8.8□□□□□ -1
HLA-DPA1-242ENST00000419277 Q6ZSA8 131 aa8.8□□□□□ -1
HLA-DPA1-242ENST00000419277 PRR15Q8IV56 129 aa8.8□□□□□ -1
HLA-DPA1-242ENST00000419277 ALMS1Q8TCU4 4167 aa8.8□□□□□ -1
HLA-DPA1-242ENST00000419277 NDUFB1O75438 58 aa8.8□□□□□ -1
HLA-DPA1-242ENST00000419277 IGLV9-49A0A0B4J1Y8 123 aa8.78□□□□□ -1
HLA-DPA1-242ENST00000419277 A0A0U1RQV1 116 aa8.78□□□□□ -1
HLA-DPA1-242ENST00000419277 KRTAP3-3Q9BYR6 98 aa8.78□□□□□ -1
HLA-DPA1-242ENST00000419277 KRTAP3-2Q9BYR7 98 aa8.78□□□□□ -1
HLA-DPA1-242ENST00000419277 A0A0G2JQZ4 141 aa8.77□□□□□ -1
HLA-DPA1-242ENST00000419277 CD164Q04900 197 aa8.77□□□□□ -1.01
HLA-DPA1-242ENST00000419277 SNURFQ9Y675 71 aa8.75□□□□□ -1.01
HLA-DPA1-242ENST00000419277 CIRBP-AS1Q8TBR5 109 aa8.74□□□□□ -1.01
HLA-DPA1-242ENST00000419277 KRTAP29-1A8MX34 341 aaPredicted RBP8.74□□□□□ -1.01
HLA-DPA1-242ENST00000419277 H3BPC8 53 aa8.74□□□□□ -1.01
HLA-DPA1-242ENST00000419277 MOBPQ13875 183 aa8.74□□□□□ -1.01
HLA-DPA1-242ENST00000419277 SSBP3-AS1Q7Z2R9 100 aa8.73□□□□□ -1.01
HLA-DPA1-242ENST00000419277 SRRM2Q9UQ35 2752 aaKnown RBP8.72□□□□□ -1.01
HLA-DPA1-242ENST00000419277 KRTAP10-2P60368 255 aa8.72□□□□□ -1.01
HLA-DPA1-242ENST00000419277 CASC2Q6XLA1 102 aa8.72□□□□□ -1.01
HLA-DPA1-242ENST00000419277 FAM30AQ9NZY2 134 aa8.71□□□□□ -1.01
HLA-DPA1-242ENST00000419277 MP68P56378 58 aa8.71□□□□□ -1.02
HLA-DPA1-242ENST00000419277 SERP1Q9Y6X1 66 aa8.71□□□□□ -1.02
HLA-DPA1-242ENST00000419277 FAM229BQ4G0N7 80 aa8.7□□□□□ -1.02
HLA-DPA1-242ENST00000419277 DEFB116Q30KQ4 102 aa8.69□□□□□ -1.02
HLA-DPA1-242ENST00000419277 Q96NJ1 140 aa8.69□□□□□ -1.02
HLA-DPA1-242ENST00000419277 CDK2AP2O75956 126 aa8.68□□□□□ -1.02
HLA-DPA1-242ENST00000419277 ASB16-AS1Q495Z4 193 aa8.68□□□□□ -1.02
HLA-DPA1-242ENST00000419277 WFDC13Q8IUB5 93 aa8.68□□□□□ -1.02
HLA-DPA1-242ENST00000419277 LINC00336Q6ZUF6 198 aa8.67□□□□□ -1.02
HLA-DPA1-242ENST00000419277 ZCCHC13Q8WW36 166 aaKnown RBP8.67□□□□□ -1.02
HLA-DPA1-242ENST00000419277 TP53AIP1Q9HCN2 124 aa8.67□□□□□ -1.02
HLA-DPA1-242ENST00000419277 DNAH8Q96JB1 4490 aa8.67□□□□□ -1.02
HLA-DPA1-242ENST00000419277 MMP24-AS1A0A0U1RRL7 71 aa8.66□□□□□ -1.02
HLA-DPA1-242ENST00000419277 FRAS1Q86XX4 4008 aa8.65□□□□□ -1.02
HLA-DPA1-242ENST00000419277 hDV103S1A0JD37 113 aa8.65□□□□□ -1.03
HLA-DPA1-242ENST00000419277 A0A1B0GVX0 72 aa8.63□□□□□ -1.03
HLA-DPA1-242ENST00000419277 KRTAP10-1P60331 282 aa8.63□□□□□ -1.03
HLA-DPA1-242ENST00000419277 Q5XG85 94 aa8.63□□□□□ -1.03
HLA-DPA1-242ENST00000419277 C8orf17Q9NRJ1 99 aa8.6□□□□□ -1.03
HLA-DPA1-242ENST00000419277 TRAV22A0A0B4J277 110 aa8.59□□□□□ -1.03
HLA-DPA1-242ENST00000419277 DNAH5Q8TE73 4624 aa8.59□□□□□ -1.03
HLA-DPA1-242ENST00000419277 HRCT1Q6UXD1 115 aa8.58□□□□□ -1.04
HLA-DPA1-242ENST00000419277 DNAH11Q96DT5 4516 aa8.58□□□□□ -1.04
HLA-DPA1-242ENST00000419277 C8orf87E5RJ46 101 aa8.57□□□□□ -1.04
HLA-DPA1-242ENST00000419277 H0Y9P7 68 aa8.57□□□□□ -1.04
HLA-DPA1-242ENST00000419277 ANAPC11Q9NYG5 84 aa8.57□□□□□ -1.04
HLA-DPA1-242ENST00000419277 LIMD2Q9BT23 127 aa8.56□□□□□ -1.04
HLA-DPA1-242ENST00000419277 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
HLA-DPA1-242ENST00000419277 FAT2Q9NYQ8 4349 aa8.55□□□□□ -1.04
HLA-DPA1-242ENST00000419277 PKD1P98161 4303 aa8.54□□□□□ -1.04
HLA-DPA1-242ENST00000419277 SMIM26A0A096LP01 95 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms